MGE detailed information
MGE type: Conjugative plasmid MGE length: 64564 bp
Accession: NZ_CP024823 Location: 1..64564 Organism: Escherichia coli strain CREC-591 Replicon: plasmid pCREC-591_2
Accession: NZ_CP024823 Location: 1..64564 Organism: Escherichia coli strain CREC-591 Replicon: plasmid pCREC-591_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU078_RS27650 () | 383..904 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| CU078_RS27655 () | 929..1660 | + | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| CU078_RS27660 () | 1863..2600 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| CU078_RS27665 () | 2651..4903 | + | 2253 | WP_061093448.1 | type IV conjugative transfer system coupling protein TraD | - |
| CU078_RS27670 () | 4903..10172 | + | 5270 | Protein_5 | Multifunctional conjugation protein TraI | Relaxase |
| CU078_RS27675 () | 10192..10938 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| CU078_RS27680 () | 10993..11553 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| CU078_RS27685 () | 11685..11885 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| CU078_RS27690 () | 12271..12870 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| CU078_RS27695 () | 13034..13264 | + | 231 | WP_001736714.1 | hypothetical protein | - |
| - () | 13465..13524 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 13465..13524 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 13465..13524 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 13465..13524 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| CU078_RS27705 () | 13569..13718 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CU078_RS27710 () | 14002..14250 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| CU078_RS27720 () | 14495..14569 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| CU078_RS27725 () | 14562..15419 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| CU078_RS29485 () | 16120..16260 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| CU078_RS27735 () | 16358..17011 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| CU078_RS29225 () | 17104..17361 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CU078_RS27740 () | 17294..17695 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CU078_RS27750 () | 17944..18359 | + | 416 | Protein_19 | IS1 family transposase IS1R | Transposase |
| CU078_RS27755 () | 18395..18940 | - | 546 | Protein_20 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CU078_RS27760 () | 19006..19710 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CU078_RS27765 () | 19792..20208 | - | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| CU078_RS27770 () | 20594..21298 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CU078_RS27775 () | 21348..22091 | + | 744 | Protein_24 | Beta-lactamase TEM | ARG |
| CU078_RS27780 () | 22349..22825 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| CU078_RS27785 () | 22872..23747 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| CU078_RS27795 () | 24169..24873 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CU078_RS29490 () | 24939..25004 | + | 66 | Protein_28 | IS1 family transposase | - |
| CU078_RS27815 () | 26453..26687 | + | 235 | Protein_29 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CU078_RS27820 () | 26815..27096 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| CU078_RS27825 () | 27219..27569 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| CU078_RS27830 () | 27572..28534 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| CU078_RS27835 () | 28681..28974 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| CU078_RS27845 () | 29051..29734 | + | 684 | WP_000085883.1 | DNA methylase | - |
| CU078_RS27850 () | 29735..29956 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| CU078_RS27855 () | 29970..30404 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| CU078_RS29495 () | 30455..31231 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| CU078_RS27870 () | 31772..32074 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| CU078_RS27875 () | 32121..32543 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| CU078_RS27880 () | 32540..32731 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| CU078_RS27900 () | 33769..33999 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CU078_RS27905 () | 34051..35412 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| CU078_RS27910 () | 35457..36020 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| CU078_RS27920 () | 36106..36567 | - | 462 | WP_001479900.1 | hypothetical protein | - |
| CU078_RS27930 () | 36869..37396 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| CU078_RS27935 () | 37454..37687 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| CU078_RS27940 () | 37748..39771 | + | 2024 | Protein_47 | ParB/RepB/Spo0J family partition protein | - |
| CU078_RS27945 () | 39840..40274 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| CU078_RS27950 () | 40271..40990 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 41002..41226 | + | 225 | NuclAT_0 | - | - |
| - () | 41002..41226 | + | 225 | NuclAT_0 | - | - |
| - () | 41002..41226 | + | 225 | NuclAT_0 | - | - |
| - () | 41002..41226 | + | 225 | NuclAT_0 | - | - |
| CU078_RS29230 () | 41011..41190 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 41159..41224 | + | 66 | - | - | Antitoxin Detail |
| CU078_RS27955 () | 41270..41428 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CU078_RS29500 () | 41666..42043 | - | 378 | Protein_52 | hypothetical protein | - |
| CU078_RS27975 () | 42343..42639 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| CU078_RS27980 () | 42750..43571 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| CU078_RS27985 () | 43868..44515 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| CU078_RS27990 () | 44792..45175 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| CU078_RS27995 () | 45366..46052 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| CU078_RS28000 () | 46146..46373 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| CU078_RS28005 () | 46407..46772 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| CU078_RS28010 () | 46787..47098 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CU078_RS28015 () | 47120..47686 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| CU078_RS28020 () | 47697..48401 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CU078_RS28025 () | 48401..49828 | + | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| CU078_RS28030 () | 49818..50408 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| CU078_RS28035 () | 50362..50592 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| CU078_RS28040 () | 50604..50855 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| CU078_RS28045 () | 50852..51367 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CU078_RS28050 () | 51502..51723 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| CU078_RS28055 () | 51883..54510 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| CU078_RS28060 () | 54507..54893 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| CU078_RS29505 () | 54890..54979 | + | 90 | Protein_71 | conjugal transfer protein TraW | - |
| CU078_RS28070 () | 54979..55479 | + | 501 | Protein_72 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CU078_RS28075 () | 55476..55847 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| CU078_RS28080 () | 55873..56295 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| CU078_RS28085 () | 56292..58142 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CU078_RS28090 () | 58169..58426 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| CU078_RS28095 () | 58419..59162 | + | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CU078_RS28100 () | 59278..59559 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CU078_RS28105 () | 59546..60091 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CU078_RS28110 () | 60021..60395 | + | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| CU078_RS28115 () | 60349..60741 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| CU078_RS28120 () | 60728..62101 | + | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|