MGE detailed information
MGE type: Conjugative plasmid MGE length: 118156 bp
Accession: NZ_CP024822 Location: 1..118156 Organism: Escherichia coli strain CREC-591 Replicon: plasmid pCREC-591_1
Accession: NZ_CP024822 Location: 1..118156 Organism: Escherichia coli strain CREC-591 Replicon: plasmid pCREC-591_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU078_RS26840 () | 73..330 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| CU078_RS26845 () | 681..1682 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| CU078_RS26850 () | 1858..2202 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| CU078_RS26855 () | 2701..2955 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| CU078_RS26860 () | 3000..3926 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| CU078_RS26865 () | 4158..5420 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| CU078_RS26870 () | 5638..6837 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| CU078_RS26875 () | 6847..7035 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| CU078_RS26880 () | 7361..8236 | + | 876 | WP_031942271.1 | Beta-lactamase CTX-M-1 | ARG |
| CU078_RS26885 () | 8283..8615 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CU078_RS26890 () | 8752..8994 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| CU078_RS26895 () | 8991..9245 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| CU078_RS26900 () | 9242..9784 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| CU078_RS26905 () | 9888..10403 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| CU078_RS26915 () | 10807..11136 | - | 330 | WP_000855119.1 | hypothetical protein | - |
| CU078_RS26920 () | 11951..12364 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| CU078_RS26925 () | 12366..13145 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| CU078_RS26930 () | 13325..13969 | + | 645 | WP_001144036.1 | ParA family protein | - |
| CU078_RS26935 () | 14056..14361 | + | 306 | WP_021577244.1 | hypothetical protein | - |
| CU078_RS26940 () | 14778..15758 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CU078_RS26945 () | 15751..16167 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CU078_RS26950 () | 16169..17443 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| CU078_RS26955 () | 17443..17880 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CU078_RS26960 () | 17877..18125 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CU078_RS26970 () | 18543..19445 | + | 903 | WP_072748703.1 | DUF1281 domain-containing protein | - |
| CU078_RS26975 () | 19449..19754 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| CU078_RS26980 () | 19830..20513 | + | 684 | WP_030003447.1 | DNA methylase | - |
| CU078_RS26985 () | 20514..20735 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| CU078_RS26990 () | 20748..21182 | + | 435 | WP_000274472.1 | DUF1380 family protein | - |
| CU078_RS26995 () | 21233..22003 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| CU078_RS27000 () | 22080..23192 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CU078_RS27010 () | 23892..24194 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| CU078_RS27015 () | 24241..24663 | + | 423 | WP_000271734.1 | DUF1380 family protein | - |
| CU078_RS27020 () | 24660..24851 | + | 192 | WP_031942274.1 | hypothetical protein | - |
| CU078_RS27035 () | 25129..26796 | - | 1668 | WP_077252586.1 | group II intron reverse transcriptase/maturase | - |
| CU078_RS29470 () | 27527..27595 | - | 69 | Protein_36 | pilus protein | - |
| CU078_RS27045 () | 27964..28491 | + | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| CU078_RS27050 () | 28549..28782 | + | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| CU078_RS27055 () | 28846..30804 | + | 1959 | WP_031942276.1 | ParB/RepB/Spo0J family partition protein | - |
| CU078_RS27060 () | 30859..31293 | + | 435 | WP_001535709.1 | conjugation system SOS inhibitor PsiB | - |
| CU078_RS27065 () | 31290..32009 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| CU078_RS27070 () | 32006..32602 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| CU078_RS27080 () | 33065..33565 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| CU078_RS29475 () | 33705..34004 | - | 300 | WP_089069080.1 | hypothetical protein | - |
| CU078_RS27095 () | 34294..34728 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CU078_RS27100 () | 34822..35088 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CU078_RS27105 () | 35153..36055 | + | 903 | WP_030003452.1 | Recombination-promoting nuclease RpnA | VF |
| CU078_RS27115 () | 36118..36312 | + | 195 | WP_001496986.1 | hypothetical protein | VF |
| CU078_RS27120 () | 36343..36594 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CU078_RS27125 () | 36628..36825 | - | 198 | WP_039026004.1 | hypothetical protein | - |
| CU078_RS27135 () | 37174..38022 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| CU078_RS27140 () | 38107..38442 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| CU078_RS27145 () | 38676..39008 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CU078_RS27150 () | 39019..41718 | + | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| CU078_RS27155 () | 41755..44046 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| CU078_RS27160 () | 44039..45109 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| CU078_RS27165 () | 45128..46336 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 46516..46578 | - | 63 | NuclAT_0 | - | - |
| - () | 46516..46578 | - | 63 | NuclAT_0 | - | - |
| - () | 46516..46578 | - | 63 | NuclAT_0 | - | - |
| - () | 46516..46578 | - | 63 | NuclAT_0 | - | - |
| CU078_RS27170 () | 46628..46780 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| CU078_RS27175 () | 46852..47103 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CU078_RS29480 () | 47762..47938 | - | 177 | WP_072745605.1 | hypothetical protein | - |
| CU078_RS27180 () | 48330..48539 | + | 210 | WP_039025903.1 | HEAT repeat domain-containing protein | - |
| CU078_RS27185 () | 48611..49273 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CU078_RS27190 () | 49344..51512 | - | 2169 | WP_000698354.1 | DotA/TraY family protein | - |
| CU078_RS27195 () | 51609..52193 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| CU078_RS27200 () | 52222..53424 | - | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| CU078_RS27205 () | 53391..54005 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| CU078_RS27210 () | 54005..57049 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| CU078_RS27215 () | 57139..57939 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CU078_RS27220 () | 57923..58111 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CU078_RS27225 () | 58175..58579 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| CU078_RS27230 () | 58630..59157 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CU078_RS27235 () | 59157..59861 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CU078_RS27240 () | 59861..61150 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| CU078_RS27245 () | 61153..62136 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| CU078_RS27250 () | 62147..62839 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| CU078_RS27255 () | 62836..63183 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CU078_RS27260 () | 63201..66968 | - | 3768 | WP_031942279.1 | SogL | - |
| CU078_RS27265 () | 67058..67609 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| CU078_RS27270 () | 67624..67914 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CU078_RS27275 () | 67911..69059 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CU078_RS27280 () | 69056..69874 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| CU078_RS27285 () | 69871..70329 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CU078_RS27290 () | 70724..71308 | - | 585 | WP_031942280.1 | histidine phosphatase family protein | - |
| CU078_RS27295 () | 71368..72570 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CU078_RS27300 () | 72656..73480 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| CU078_RS27305 () | 73631..74785 | - | 1155 | WP_001139958.1 | integrase | - |
| CU078_RS27310 () | 74913..75068 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| CU078_RS27325 () | 75976..76224 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| CU078_RS27330 () | 76221..77513 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| CU078_RS27335 () | 77513..78169 | - | 657 | WP_001193554.1 | hypothetical protein | VF |
| CU078_RS27340 () | 78154..78714 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| CU078_RS27345 () | 78724..79338 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| CU078_RS27350 () | 79356..80453 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CU078_RS27355 () | 80466..82019 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CU078_RS27360 () | 82030..82482 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| CU078_RS27365 () | 82469..83764 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| CU078_RS27370 () | 83757..85439 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CU078_RS27375 () | 85453..85890 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| CU078_RS27380 () | 85890..86956 | - | 1067 | Protein_99 | hypothetical protein | VF |
| CU078_RS27395 () | 87580..87876 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| CU078_RS27400 () | 88052..88306 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| CU078_RS27405 () | 88468..89019 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| CU078_RS27415 () | 89246..90001 | - | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| CU078_RS27420 () | 90018..91553 | - | 1536 | WP_023181050.1 | IS21 family transposase ISSso4 | Transposase |
| CU078_RS27425 () | 91838..92521 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| CU078_RS27435 () | 92775..93308 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| CU078_RS27445 () | 93750..94037 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CU078_RS27450 () | 93955..94218 | - | 264 | WP_001324596.1 | ash family protein | - |
| CU078_RS27465 () | 95191..96222 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| CU078_RS27480 () | 97189..97500 | + | 312 | WP_097291460.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CU078_RS27485 () | 97500..97787 | + | 288 | WP_181475205.1 | helix-turn-helix transcriptional regulator | - |
| CU078_RS27490 () | 98152..98526 | + | 375 | WP_089576443.1 | TIR domain-containing protein | - |
| CU078_RS27495 () | 98536..99489 | + | 954 | WP_097291462.1 | caspase family protein | - |
| CU078_RS27510 () | 100098..101612 | - | 1515 | Protein_114 | Tn3-like element TnAs1 family transposase | - |
| CU078_RS27515 () | 101678..102382 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CU078_RS27525 () | 102434..102670 | + | 237 | Protein_116 | IS6 family transposase | - |
| CU078_RS27540 () | 103163..103747 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| CU078_RS27545 () | 103747..104985 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| CU078_RS27550 () | 104982..105887 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| CU078_RS27560 () | 106009..106713 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CU078_RS27565 () | 107087..107503 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| CU078_RS27570 () | 107508..108026 | - | 519 | WP_014839979.1 | hypothetical protein | - |
| CU078_RS27575 () | 108026..108814 | - | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| CU078_RS27580 () | 108834..109304 | - | 471 | WP_049824851.1 | TetR family transcriptional regulator | - |
| CU078_RS27585 () | 109314..110018 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CU078_RS27590 () | 110083..110763 | - | 681 | Protein_126 | class 1 integron integrase IntI1 | - |
| CU078_RS27595 () | 111035..111739 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CU078_RS27600 () | 111957..112271 | - | 315 | Protein_128 | hypothetical protein | - |
| CU078_RS27605 () | 112327..112929 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| CU078_RS27615 () | 113283..114122 | + | 840 | Protein_130 | hypothetical protein | - |
| CU078_RS27625 () | 114255..114628 | + | 374 | Protein_131 | hypothetical protein | - |
| CU078_RS27630 () | 114907..116787 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| CU078_RS27635 () | 116805..117152 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| CU078_RS27640 () | 117271..117619 | + | 349 | Protein_134 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|