MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP024801 Location: 2342558..2343538 Organism: Escherichia coli strain AMA1167 Replicon: chromosome
Accession: NZ_CP024801 Location: 2342558..2343538 Organism: Escherichia coli strain AMA1167 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC42_RS12030 () | 2337922..2339457 | - | 1536 | WP_001194882.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
| CUC42_RS12035 () | 2339706..2340659 | + | 954 | WP_000154340.1 | transcriptional regulator LsrR | - |
| CUC42_RS12040 () | 2340738..2342330 | + | 1593 | WP_000113125.1 | autoinducer-2 kinase | - |
| CUC42_RS12045 () | 2342558..2343538 | + | 981 | WP_000019400.1 | IS5-like element IS5 family transposase | - |
| CUC42_RS12055 () | 2343685..2347263 | + | 3579 | Protein_2216 | ECSE_1600 family autotransporter | - |
| CUC42_RS12060 () | 2347472..2347738 | + | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |