MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 60616 bp
Accession: NZ_CP024677 Location: 4876822..4937437 Organism: Citrobacter freundii strain UMH16 Replicon: chromosome
Accession: NZ_CP024677 Location: 4876822..4937437 Organism: Citrobacter freundii strain UMH16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC48_RS24165 () | 4872785..4874506 | + | 1722 | WP_003844994.1 | SulP family inorganic anion transporter | - |
| CUC48_RS24170 () | 4874727..4876388 | - | 1662 | WP_086538682.1 | fatty acid--CoA ligase | - |
| CUC48_RS24175 () | 4877082..4877375 | + | 294 | WP_038917748.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CUC48_RS24180 () | 4877372..4877860 | + | 489 | WP_057108449.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CUC48_RS24185 () | 4877953..4879056 | + | 1104 | WP_064388374.1 | hypothetical protein | - |
| CUC48_RS24190 () | 4879332..4879821 | - | 490 | Protein_4585 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CUC48_RS24195 () | 4880391..4881800 | + | 1410 | WP_057108451.1 | N-6 DNA methylase | - |
| CUC48_RS24200 () | 4881887..4883416 | + | 1530 | WP_057108452.1 | restriction endonuclease subunit S | - |
| CUC48_RS24205 () | 4883413..4885011 | + | 1599 | WP_057108453.1 | restriction system-associated AAA family ATPase | - |
| CUC48_RS24210 () | 4885011..4886096 | + | 1086 | WP_057108454.1 | hypothetical protein | - |
| CUC48_RS24215 () | 4886737..4887944 | + | 1208 | WP_088169078.1 | IS3 family transposase ISEcl1 | Transposase |
| CUC48_RS24220 () | 4888638..4888751 | - | 114 | Protein_4591 | toxin-antitoxin system, antitoxin component | - |
| CUC48_RS24225 () | 4888839..4889060 | + | 222 | WP_077267911.1 | hypothetical protein | - |
| CUC48_RS24230 () | 4889322..4889471 | + | 150 | Protein_4593 | transposase | - |
| CUC48_RS24235 () | 4889663..4890271 | + | 609 | WP_064388615.1 | TetR/AcrR family transcriptional regulator | - |
| CUC48_RS24240 () | 4890268..4891419 | + | 1152 | WP_064388613.1 | efflux RND transporter periplasmic adaptor subunit | - |
| CUC48_RS24245 () | 4891416..4892621 | + | 1206 | WP_064388612.1 | ABC transporter permease | - |
| CUC48_RS24250 () | 4892623..4893333 | + | 711 | WP_064388610.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CUC48_RS24255 () | 4893362..4893835 | + | 474 | WP_064388621.1 | cytochrome c | - |
| CUC48_RS24260 () | 4893822..4895309 | + | 1488 | WP_064388608.1 | efflux transporter outer membrane subunit | - |
| CUC48_RS24265 () | 4895440..4895997 | + | 558 | WP_064388619.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| CUC48_RS24270 () | 4896000..4898972 | + | 2973 | WP_064388606.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CUC48_RS24275 () | 4899006..4900097 | - | 1092 | Protein_4602 | ABC transporter ATP-binding protein | - |
| CUC48_RS24280 () | 4900094..4901095 | - | 1002 | WP_064388604.1 | hypothetical protein | VF |
| CUC48_RS24285 () | 4901222..4901884 | + | 663 | WP_064388602.1 | CerR family C-terminal domain-containing protein | - |
| CUC48_RS24290 () | 4902137..4902316 | + | 180 | Protein_4605 | transcriptional regulator | - |
| CUC48_RS24295 () | 4902397..4902721 | + | 325 | Protein_4606 | helix-turn-helix domain-containing protein | - |
| CUC48_RS24300 () | 4902754..4903059 | - | 306 | Protein_4607 | transposase | - |
| CUC48_RS24305 () | 4903054..4903632 | + | 579 | Protein_4608 | IS66 family transposase ISSgsp1 | Transposase |
| CUC48_RS24310 () | 4903671..4904845 | - | 1175 | Protein_4609 | glycogen/starch/alpha-glucan phosphorylase | - |
| CUC48_RS24320 () | 4905234..4906514 | - | 1281 | WP_057108459.1 | glucose-1-phosphate adenylyltransferase | - |
| CUC48_RS24325 () | 4906660..4908828 | - | 2169 | WP_057108458.1 | 1,4-alpha-glucan branching enzyme | - |
| CUC48_RS26220 () | 4909313..4909462 | - | 150 | WP_159359333.1 | hypothetical protein | - |
| CUC48_RS24330 () | 4909585..4909806 | - | 222 | WP_077267911.1 | hypothetical protein | - |
| CUC48_RS24335 () | 4909894..4910007 | + | 114 | Protein_4614 | toxin-antitoxin system, antitoxin component | - |
| CUC48_RS24345 () | 4911951..4913543 | - | 1593 | WP_060589128.1 | IS66 family transposase ISEcl6 | Transposase |
| CUC48_RS24350 () | 4913574..4913924 | - | 351 | WP_009309933.1 | IS66 family transposase ISEcl6 | Transposase |
| CUC48_RS24355 () | 4913921..4914325 | - | 405 | WP_009309932.1 | IS66 family transposase ISKox1 | Transposase |
| CUC48_RS24360 () | 4914958..4915176 | - | 219 | Protein_4619 | IS256 family transposase ISSoEn2 | Transposase |
| CUC48_RS24365 () | 4915109..4915405 | - | 297 | WP_057108462.1 | hypothetical protein | - |
| CUC48_RS26155 () | 4916040..4916297 | - | 258 | WP_140415848.1 | hypothetical protein | - |
| CUC48_RS24370 () | 4916280..4917224 | + | 945 | WP_057108463.1 | DUF1738 domain-containing protein | - |
| CUC48_RS24375 () | 4917547..4917783 | + | 237 | WP_057108464.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| CUC48_RS24380 () | 4917786..4918100 | + | 315 | WP_057108625.1 | CcdB family protein | Toxin Detail |
| CUC48_RS24385 () | 4918097..4918849 | - | 753 | WP_064388594.1 | hypothetical protein | - |
| CUC48_RS24390 () | 4918858..4920594 | - | 1737 | WP_064388593.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CUC48_RS24400 () | 4921370..4921675 | - | 306 | WP_072146387.1 | dpoa decarboxylase | - |
| CUC48_RS24405 () | 4921724..4922026 | - | 303 | WP_057108600.1 | conjugal transfer protein | - |
| CUC48_RS24410 () | 4922075..4922473 | - | 399 | WP_057108599.1 | cag pathogenicity island Cag12 family protein | - |
| CUC48_RS24415 () | 4922470..4923495 | - | 1026 | WP_064388592.1 | Type IV secretion system protein VirB11 | VF |
| CUC48_RS24420 () | 4923485..4924705 | - | 1221 | WP_064388590.1 | Protein virB10 | VF |
| CUC48_RS24425 () | 4924725..4925630 | - | 906 | WP_064388589.1 | Type IV secretion system protein virB9 | VF |
| CUC48_RS24430 () | 4925630..4926313 | - | 684 | WP_064388587.1 | Type IV secretion system protein PtlE | VF |
| CUC48_RS26360 () | 4926306..4926443 | - | 138 | WP_164887140.1 | hypothetical protein | - |
| CUC48_RS24435 () | 4926537..4927604 | - | 1068 | WP_064388579.1 | type IV secretion system protein | - |
| CUC48_RS24440 () | 4927616..4927843 | - | 228 | WP_171847087.1 | EexN family lipoprotein | - |
| CUC48_RS24445 () | 4927862..4928566 | - | 705 | WP_057108504.1 | type IV secretion system protein | - |
| CUC48_RS24450 () | 4928587..4931331 | - | 2745 | WP_057108505.1 | Type IV secretion system protein virB4 | VF |
| CUC48_RS24455 () | 4931342..4931635 | - | 294 | WP_057108506.1 | Type IV secretion system protein PtlA | VF |
| CUC48_RS24460 () | 4931635..4932345 | - | 711 | WP_057108507.1 | Type IV secretion system protein virB1 | VF |
| CUC48_RS24465 () | 4932422..4932655 | - | 234 | WP_064388616.1 | hypothetical protein | - |
| CUC48_RS24470 () | 4933050..4933259 | - | 210 | WP_057108508.1 | TraR/DksA family transcriptional regulator | - |
| CUC48_RS24475 () | 4933249..4933836 | - | 588 | WP_077822678.1 | DUF2857 domain-containing protein | - |
| CUC48_RS24480 () | 4933862..4934047 | - | 186 | WP_057107840.1 | AlpA family transcriptional regulator | - |
| CUC48_RS24485 () | 4934183..4935109 | - | 927 | WP_057108510.1 | hypothetical protein | - |
| CUC48_RS24490 () | 4935992..4937260 | - | 1269 | WP_057108511.1 | Prophage integrase IntS ; Integrase | Integrase |
| CUC48_RS24500 () | 4937650..4938225 | - | 576 | WP_003025441.1 | transcriptional regulator | - |
| CUC48_RS24505 () | 4938262..4939971 | - | 1710 | WP_086529665.1 | protein-disulfide reductase DsbD | - |
| CUC48_RS24510 () | 4939947..4940294 | - | 348 | WP_003025447.1 | divalent cation tolerance protein CutA | - |
| CUC48_RS24515 () | 4940423..4941724 | - | 1302 | WP_003025449.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|