MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96941 bp
Accession: NZ_CP024644 Location: 2436465..2533405 Organism: Komagataeibacter xylinus strain xylinus Replicon: chromosome
Accession: NZ_CP024644 Location: 2436465..2533405 Organism: Komagataeibacter xylinus strain xylinus Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CT154_RS11010 () | 2432385..2433386 | - | 1002 | WP_007397924.1 | P-type conjugative transfer protein TrbG | - |
| CT154_RS11015 () | 2433383..2434066 | - | 684 | WP_007397923.1 | conjugal transfer protein TrbF | - |
| CT154_RS11020 () | 2434072..2435499 | - | 1428 | WP_034933517.1 | P-type conjugative transfer protein TrbL | - |
| CT154_RS11025 () | 2435505..2436308 | - | 804 | WP_007397921.1 | P-type conjugative transfer protein TrbJ | - |
| CT154_RS11030 () | 2436305..2438758 | - | 2454 | WP_007397920.1 | conjugal transfer protein TrbE | - |
| CT154_RS11035 () | 2438774..2439052 | - | 279 | WP_007397919.1 | VirB3 family type IV secretion system protein | - |
| CT154_RS11040 () | 2439052..2439420 | - | 369 | WP_034933525.1 | TrbC/VirB2 family protein | - |
| CT154_RS11045 () | 2439417..2440421 | - | 1005 | WP_082770880.1 | Type IV secretion system protein VirB11 | VF |
| CT154_RS11050 () | 2440567..2441013 | - | 447 | WP_007397916.1 | hypothetical protein | - |
| CT154_RS11055 () | 2441021..2443012 | - | 1992 | WP_039998716.1 | Conjugal transfer protein TraG | VF |
| CT154_RS11060 () | 2443301..2443555 | + | 255 | WP_010517990.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CT154_RS11065 () | 2443555..2443983 | + | 429 | WP_007397912.1 | type II toxin-antitoxin system VapC family toxin | - |
| CT154_RS11070 () | 2443997..2445736 | - | 1740 | WP_039998686.1 | VirD2 family relaxase/mobilization nuclease | - |
| CT154_RS11075 () | 2446019..2446723 | - | 705 | WP_007397909.1 | lytic transglycosylase domain-containing protein | - |
| CT154_RS11080 () | 2446728..2447066 | - | 339 | WP_007397908.1 | DUF736 domain-containing protein | - |
| CT154_RS11085 () | 2447068..2447625 | - | 558 | WP_007397907.1 | S26 family signal peptidase | - |
| CT154_RS11090 () | 2447622..2448119 | - | 498 | WP_007397906.1 | DUF2840 domain-containing protein | - |
| CT154_RS11095 () | 2448116..2449195 | - | 1080 | WP_039998715.1 | replication initiator protein A | - |
| CT154_RS11100 () | 2449209..2449460 | - | 252 | WP_007397904.1 | helix-turn-helix domain-containing protein | - |
| CT154_RS11105 () | 2449681..2450229 | - | 549 | WP_099963252.1 | DUF2285 domain-containing protein | - |
| CT154_RS11115 () | 2450606..2450869 | - | 264 | WP_007397900.1 | DUF2285 domain-containing protein | - |
| CT154_RS11120 () | 2451004..2451288 | - | 285 | WP_007397899.1 | helix-turn-helix domain-containing protein | - |
| CT154_RS16810 () | 2451471..2451608 | - | 138 | WP_007397898.1 | hypothetical protein | - |
| CT154_RS11130 () | 2451954..2452277 | - | 324 | WP_007397897.1 | DUF736 domain-containing protein | - |
| CT154_RS11140 () | 2453138..2453761 | + | 624 | WP_039998684.1 | plasmid pRiA4b ORF-3 family protein | - |
| CT154_RS11150 () | 2454808..2455743 | - | 936 | WP_007397892.1 | DUF2493 domain-containing protein | - |
| CT154_RS11155 () | 2456060..2457139 | - | 1080 | WP_010510556.1 | toprim domain-containing protein | - |
| CT154_RS11160 () | 2457211..2457504 | + | 294 | WP_157998287.1 | HU family DNA-binding protein | - |
| CT154_RS11165 () | 2457582..2458784 | - | 1203 | WP_007397889.1 | hypothetical protein | - |
| CT154_RS11170 () | 2458923..2461004 | - | 2082 | WP_039998683.1 | ParB/RepB/Spo0J family partition protein | - |
| CT154_RS11175 () | 2461297..2462517 | - | 1221 | WP_039998682.1 | chromate efflux transporter | - |
| CT154_RS11180 () | 2462681..2463286 | - | 606 | WP_007397886.1 | cytochrome b | - |
| CT154_RS11185 () | 2463444..2464139 | + | 696 | WP_007397885.1 | VIT family protein | - |
| CT154_RS11190 () | 2464217..2464570 | + | 354 | WP_007397884.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| CT154_RS11195 () | 2464567..2464989 | + | 423 | WP_007397883.1 | arsenate reductase (glutaredoxin) | - |
| CT154_RS11200 () | 2464986..2466284 | + | 1299 | WP_192810407.1 | arsenic transporter | - |
| CT154_RS11205 () | 2466308..2467006 | + | 699 | WP_039998713.1 | arsenical resistance protein ArsH | - |
| CT154_RS11210 () | 2467015..2468070 | + | 1056 | WP_007397880.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CT154_RS11215 () | 2468285..2468968 | - | 684 | WP_007397879.1 | DUF1275 domain-containing protein | - |
| CT154_RS11220 () | 2468968..2470230 | - | 1263 | WP_007397878.1 | sodium:proton antiporter | - |
| CT154_RS11225 () | 2470362..2470655 | - | 294 | WP_003618711.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| CT154_RS11230 () | 2470652..2470912 | - | 261 | WP_003618686.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CT154_RS11235 () | 2471232..2472059 | - | 828 | WP_010510580.1 | S-formylglutathione hydrolase | - |
| CT154_RS11240 () | 2472084..2472485 | - | 402 | WP_099963253.1 | VOC family protein | - |
| CT154_RS11245 () | 2472545..2473654 | - | 1110 | WP_010510585.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| CT154_RS11250 () | 2473696..2473971 | - | 276 | WP_010510587.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| CT154_RS11255 () | 2474329..2474691 | - | 363 | WP_010510588.1 | helix-turn-helix transcriptional regulator | - |
| CT154_RS11260 () | 2474807..2475931 | + | 1125 | WP_099963254.1 | alkene reductase | - |
| CT154_RS11265 () | 2475948..2477318 | + | 1371 | WP_010510594.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| CT154_RS11270 () | 2477481..2478560 | + | 1080 | WP_099963255.1 | IS5 family transposase ISMex35 | Transposase |
| CT154_RS11275 () | 2478695..2479306 | + | 612 | Protein_2216 | MSMEG_0569 family flavin-dependent oxidoreductase | - |
| CT154_RS11280 () | 2479321..2481093 | + | 1773 | WP_007397861.1 | AMP-binding protein | - |
| CT154_RS11285 () | 2481372..2482805 | + | 1434 | WP_007397860.1 | cytochrome ubiquinol oxidase subunit I | - |
| CT154_RS11290 () | 2482808..2483827 | + | 1020 | WP_007397859.1 | cytochrome d ubiquinol oxidase subunit II | - |
| CT154_RS11295 () | 2483814..2483963 | + | 150 | WP_007397858.1 | DUF2474 domain-containing protein | - |
| CT154_RS11305 () | 2485351..2486697 | - | 1347 | Protein_2222 | AAA family ATPase | - |
| CT154_RS11310 () | 2487306..2487548 | + | 243 | WP_039998678.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| CT154_RS11315 () | 2487545..2487847 | + | 303 | WP_202795781.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CT154_RS11320 () | 2488711..2493921 | + | 5211 | WP_007397850.1 | DUF4011 domain-containing protein | - |
| CT154_RS11325 () | 2493923..2494753 | - | 831 | WP_039998273.1 | IS5 family transposase IS1032 | Transposase |
| CT154_RS11330 () | 2495030..2495653 | + | 624 | WP_083824408.1 | DUF3320 domain-containing protein | - |
| CT154_RS11335 () | 2495755..2495991 | + | 237 | Protein_2228 | transposase | - |
| CT154_RS11340 () | 2496202..2496738 | + | 537 | WP_007397847.1 | putative ECF RNA polymerase sigma factor SigI | VF |
| CT154_RS11345 () | 2496817..2497815 | + | 999 | WP_007397846.1 | FecR domain-containing protein | - |
| CT154_RS11350 () | 2497988..2500543 | + | 2556 | WP_099963315.1 | TonB-dependent siderophore receptor | - |
| CT154_RS11355 () | 2500661..2502379 | + | 1719 | WP_099963237.1 | ISL3 family transposase ISAzba9 | Transposase |
| CT154_RS11360 () | 2502486..2503265 | - | 780 | WP_003630803.1 | IS21 family transposase ISGdi17 | Transposase |
| CT154_RS11365 () | 2503255..2503455 | - | 201 | Protein_2234 | IS21 family transposase | - |
| CT154_RS11375 () | 2503522..2504367 | - | 846 | WP_007396167.1 | IS21 family transposase ISRel3 | Transposase |
| CT154_RS11380 () | 2504364..2505614 | - | 1251 | WP_007396168.1 | IS21 family transposase ISAzs30 | Transposase |
| CT154_RS11385 () | 2505759..2507699 | - | 1941 | Protein_2237 | FAD-dependent oxidoreductase | - |
| CT154_RS11390 () | 2507729..2509369 | - | 1641 | WP_007399407.1 | alginate export family protein | - |
| CT154_RS11395 () | 2509393..2510613 | - | 1221 | WP_039999532.1 | NarK/NasA family nitrate transporter | - |
| CT154_RS11400 () | 2510909..2511718 | - | 810 | WP_007399403.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| CT154_RS11405 () | 2511940..2512563 | - | 624 | WP_039999484.1 | NTP transferase domain-containing protein | - |
| CT154_RS11415 () | 2512917..2515220 | - | 2304 | WP_007399398.1 | FdhF/YdeP family oxidoreductase | - |
| CT154_RS11420 () | 2515244..2515777 | - | 534 | WP_007399397.1 | nitrate reductase associated protein | - |
| CT154_RS11430 () | 2515969..2516988 | - | 1020 | WP_007399395.1 | cytochrome d ubiquinol oxidase subunit II | - |
| CT154_RS11435 () | 2516992..2518425 | - | 1434 | WP_039999480.1 | cytochrome ubiquinol oxidase subunit I | - |
| CT154_RS11440 () | 2518782..2519060 | - | 279 | Protein_2246 | transposase | - |
| CT154_RS11445 () | 2519339..2520169 | + | 831 | WP_039998273.1 | IS5 family transposase IS1032 | Transposase |
| CT154_RS11450 () | 2520098..2521693 | - | 1596 | WP_007399390.1 | DNA-directed RNA polymerase | - |
| CT154_RS11455 () | 2522396..2523193 | + | 798 | WP_039999474.1 | hypothetical protein | - |
| CT154_RS11460 () | 2523323..2523505 | + | 183 | Protein_2250 | IS21 family transposase | - |
| CT154_RS11465 () | 2523602..2524122 | + | 521 | Protein_2251 | ATP-binding cassette domain-containing protein | - |
| CT154_RS11470 () | 2524173..2525093 | - | 921 | Protein_2252 | ParB/RepB/Spo0J family partition protein | - |
| CT154_RS16585 () | 2525322..2525645 | - | 324 | WP_139064305.1 | hypothetical protein | - |
| CT154_RS16815 () | 2525775..2526215 | - | 441 | WP_168175562.1 | hypothetical protein | - |
| CT154_RS11475 () | 2526100..2526895 | + | 796 | WP_206052617.1 | IS5 family transposase | - |
| CT154_RS11490 () | 2528068..2528169 | + | 102 | Protein_2257 | IS5/IS1182 family transposase | - |
| CT154_RS16590 () | 2528211..2528924 | - | 714 | WP_146750217.1 | hypothetical protein | - |
| CT154_RS11495 () | 2528921..2529577 | - | 657 | WP_157772013.1 | hypothetical protein | - |
| CT154_RS11500 () | 2529707..2530537 | + | 831 | WP_039998273.1 | IS5 family transposase IS1032 | Transposase |
| CT154_RS16595 () | 2530809..2531093 | - | 285 | WP_139064303.1 | hypothetical protein | - |
| CT154_RS11510 () | 2531996..2533099 | - | 1104 | WP_007399377.1 | hypothetical protein | - |
| CT154_RS11515 () | 2533156..2536923 | - | 3768 | WP_007399376.1 | ATP-binding protein | - |
| CT154_RS11530 () | 2537840..2538397 | - | 558 | WP_039999417.1 | TetR/AcrR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|