MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71104 bp
Accession: NZ_CP024490 Location: 1..71104 Organism: Klebsiella pneumoniae strain INF249 Replicon: plasmid unnamed1
Accession: NZ_CP024490 Location: 1..71104 Organism: Klebsiella pneumoniae strain INF249 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CTI54_RS28215 () | 1..858 | + | 858 | WP_020316930.1 | incFII family plasmid replication initiator RepA | - |
| CTI54_RS28230 () | 1902..2237 | - | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| CTI54_RS28235 () | 2410..2691 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| CTI54_RS28240 () | 2745..3356 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
| CTI54_RS29655 () | 3353..3514 | - | 162 | WP_001326844.1 | hypothetical protein | VF |
| CTI54_RS28250 () | 3541..4533 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| CTI54_RS29660 () | 4582..4737 | - | 156 | WP_000075580.1 | hypothetical protein | - |
| CTI54_RS28255 () | 4878..5582 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CTI54_RS28265 () | 5772..6212 | - | 441 | WP_048270277.1 | hypothetical protein | - |
| CTI54_RS28270 () | 6299..9445 | - | 3147 | WP_009309899.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| CTI54_RS28275 () | 9456..10748 | - | 1293 | WP_048270279.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| CTI54_RS28280 () | 10862..11224 | - | 363 | WP_004213578.1 | cation efflux system protein CusF | - |
| CTI54_RS28285 () | 11253..12638 | - | 1386 | WP_023280925.1 | Cation efflux system protein CusC | VF |
| CTI54_RS28290 () | 12828..13508 | + | 681 | WP_001572351.1 | Transcriptional regulatory protein CusR | VF |
| CTI54_RS28295 () | 13501..14976 | + | 1476 | WP_003032875.1 | copper/silver sensor histidine kinase SilS | - |
| CTI54_RS28300 () | 15227..15658 | + | 432 | WP_020803533.1 | silver-binding protein SilE | - |
| CTI54_RS28305 () | 15806..16156 | + | 351 | WP_004187110.1 | DUF305 domain-containing protein | - |
| CTI54_RS28310 () | 16342..17250 | - | 909 | WP_032425603.1 | HNH endonuclease | - |
| CTI54_RS28315 () | 17794..18816 | - | 1023 | WP_000361404.1 | helicase UvrD | - |
| CTI54_RS28320 () | 18801..20363 | - | 1563 | WP_009309907.1 | AAA family ATPase | - |
| CTI54_RS28325 () | 20437..20853 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CTI54_RS28330 () | 20850..21080 | - | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CTI54_RS29665 () | 21037..21498 | + | 462 | WP_160866775.1 | hypothetical protein | - |
| CTI54_RS28345 () | 21668..21886 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CTI54_RS28350 () | 21888..22193 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CTI54_RS28355 () | 22380..23384 | + | 1005 | WP_029497484.1 | hypothetical protein | - |
| CTI54_RS28360 () | 23582..24361 | + | 780 | WP_029497485.1 | site-specific integrase | - |
| CTI54_RS28365 () | 24419..24676 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| CTI54_RS29670 () | 24805..24918 | - | 114 | WP_012540012.1 | hypothetical protein | - |
| CTI54_RS28370 () | 25552..26307 | + | 756 | WP_012539983.1 | replication initiation protein RepE | - |
| CTI54_RS28385 () | 27073..28278 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| CTI54_RS28390 () | 28278..29252 | + | 975 | WP_011977819.1 | ParB/RepB/Spo0J family partition protein | - |
| CTI54_RS28395 () | 29334..30605 | - | 1272 | WP_029497486.1 | Y-family DNA polymerase | - |
| CTI54_RS28400 () | 30605..31036 | - | 432 | WP_015632467.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CTI54_RS28410 () | 31442..32929 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| CTI54_RS28415 () | 33178..34149 | + | 972 | WP_001568038.1 | hypothetical protein | - |
| CTI54_RS28420 () | 34152..34823 | + | 672 | WP_050888056.1 | plasmid partitioning/stability family protein | - |
| CTI54_RS28425 () | 34885..35115 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| CTI54_RS28430 () | 35552..36253 | + | 702 | WP_001568041.1 | DNA methylase | - |
| CTI54_RS28435 () | 36253..36474 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| CTI54_RS28440 () | 36484..36903 | + | 420 | WP_004144453.1 | DUF1380 domain-containing protein | - |
| CTI54_RS28445 () | 36957..37724 | + | 768 | WP_032435768.1 | hypothetical protein | - |
| CTI54_RS28455 () | 38405..38833 | + | 429 | WP_032435770.1 | antirestriction protein | - |
| CTI54_RS28460 () | 38876..39382 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| CTI54_RS28465 () | 39425..39616 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| CTI54_RS28470 () | 39804..40058 | + | 255 | WP_029497568.1 | DNA polymerase III subunit theta | - |
| CTI54_RS28475 () | 40093..40413 | + | 321 | WP_032431403.1 | hypothetical protein | - |
| CTI54_RS28495 () | 41132..41674 | + | 543 | WP_063445496.1 | single-stranded DNA-binding protein | - |
| CTI54_RS28500 () | 41723..41971 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| CTI54_RS28505 () | 42041..44098 | + | 2058 | WP_020277924.1 | ParB/RepB/Spo0J family partition protein | - |
| CTI54_RS28510 () | 44143..44574 | + | 432 | WP_004194235.1 | conjugation system SOS inhibitor PsiB | - |
| CTI54_RS28515 () | 44571..45299 | + | 729 | WP_015065618.1 | plasmid SOS inhibition protein A | - |
| CTI54_RS28520 () | 45296..45622 | + | 327 | WP_004194231.1 | hypothetical protein | - |
| CTI54_RS28525 () | 45678..46052 | + | 375 | WP_004182064.1 | hypothetical protein | - |
| CTI54_RS28530 () | 46252..47621 | + | 1370 | WP_094645257.1 | IS3 family transposase ISKpn8 | Transposase |
| CTI54_RS28535 () | 47760..48182 | - | 423 | WP_032072095.1 | nickel resistance OB fold protein NcrY | - |
| CTI54_RS28540 () | 48344..49474 | - | 1131 | WP_004196366.1 | Ni(II)/Co(II) efflux transporter permease subunit NcrC | - |
| CTI54_RS28545 () | 49487..49756 | - | 270 | WP_004196355.1 | nickel-sensing transcriptional repressor NcrB | - |
| CTI54_RS28550 () | 49862..51160 | - | 1299 | WP_004196314.1 | nickel resistance membrane nickel efflux protein NirA | - |
| CTI54_RS28555 () | 51394..52152 | - | 759 | WP_004196325.1 | hypothetical protein | - |
| CTI54_RS28560 () | 52206..53126 | - | 921 | WP_004196315.1 | hypothetical protein | - |
| CTI54_RS28565 () | 53189..53560 | - | 372 | WP_004196359.1 | hypothetical protein | - |
| CTI54_RS28570 () | 53685..53877 | - | 193 | Protein_62 | MFS transporter | - |
| CTI54_RS28575 () | 53907..54884 | + | 978 | WP_004196334.1 | chromate resistance protein | - |
| CTI54_RS28580 () | 54841..56217 | + | 1377 | WP_004196363.1 | chromate efflux transporter | - |
| CTI54_RS28585 () | 56248..56937 | - | 690 | WP_004196322.1 | hypothetical protein | - |
| CTI54_RS28590 () | 56951..57688 | - | 738 | WP_008460272.1 | HupE/UreJ family protein | - |
| CTI54_RS28595 () | 57732..58097 | - | 366 | WP_009651956.1 | hypothetical protein | - |
| CTI54_RS28600 () | 58322..58609 | + | 288 | WP_094645258.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CTI54_RS28605 () | 58597..59079 | + | 483 | WP_029497408.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CTI54_RS28610 () | 59476..60168 | - | 693 | Protein_70 | IS3 family transposase ISKpn38 | Transposase |
| CTI54_RS28615 () | 60198..60554 | - | 357 | Protein_71 | transposase | - |
| CTI54_RS28620 () | 60588..62126 | - | 1539 | WP_004196907.1 | IS66 family transposase ISEc22 | Transposase |
| CTI54_RS28625 () | 62175..62522 | - | 348 | WP_004196919.1 | IS66 family transposase ISKpn24 | Transposase |
| CTI54_RS28630 () | 62519..62923 | - | 405 | WP_004196883.1 | IS66 family transposase ISEc22 | Transposase |
| CTI54_RS28635 () | 63005..63853 | - | 849 | Protein_75 | IS3 family transposase ISKpn38 | Transposase |
| CTI54_RS28640 () | 63942..65282 | + | 1341 | WP_000589001.1 | ISNCY family transposase ISCARN112 | Transposase |
| CTI54_RS28645 () | 65703..66941 | + | 1239 | WP_029497477.1 | IS110 family transposase ISCps4 | Transposase |
| CTI54_RS28650 () | 67417..67989 | + | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| CTI54_RS28655 () | 68189..69112 | + | 924 | WP_020277922.1 | cation diffusion facilitator family transporter | - |
| CTI54_RS28665 () | 69375..69614 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | - |
| CTI54_RS28670 () | 69614..69901 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | - |
| CTI54_RS28675 () | 69968..71002 | - | 1035 | Protein_82 | IS481 family transposase ISKpn28 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|