MGE detailed information
MGE type: Conjugative plasmid MGE length: 124142 bp
Accession: NZ_CP024287 Location: 1..124142 Organism: Escherichia albertii strain 2014C-4356 Replicon: plasmid unnamed5
Accession: NZ_CP024287 Location: 1..124142 Organism: Escherichia albertii strain 2014C-4356 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCF14_RS27125 () | 835..1344 | - | 510 | WP_137445725.1 | hypothetical protein | VF |
| CCF14_RS27130 () | 1759..2142 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| CCF14_RS27135 () | 2332..3018 | + | 687 | WP_000332496.1 | PAS domain-containing protein | - |
| CCF14_RS27140 () | 3112..3339 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| CCF14_RS27145 () | 3373..3738 | + | 366 | WP_089634697.1 | type IV conjugative transfer system pilin TraA | - |
| CCF14_RS27150 () | 3753..4064 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CCF14_RS27155 () | 4086..4652 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| CCF14_RS27160 () | 4663..5367 | + | 705 | WP_149001176.1 | type-F conjugative transfer system secretin TraK | - |
| CCF14_RS27165 () | 5367..6796 | + | 1430 | Protein_9 | conjugal transfer protein TraB | - |
| CCF14_RS27170 () | 6786..7376 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| CCF14_RS27175 () | 7330..7560 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| CCF14_RS27180 () | 7572..7823 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| CCF14_RS27185 () | 7820..8335 | + | 516 | WP_089634700.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CCF14_RS27190 () | 8470..8691 | + | 222 | WP_099588274.1 | conjugal transfer protein TraR | - |
| CCF14_RS27195 () | 8851..9837 | + | 987 | Protein_15 | TraC family protein | - |
| CCF14_RS27200 () | 9869..11440 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS27205 () | 11460..11807 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS27210 () | 11807..12484 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS27215 () | 12539..14185 | + | 1647 | Protein_19 | type IV secretion system protein TraC | - |
| CCF14_RS27220 () | 14182..14568 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| CCF14_RS27225 () | 14565..15197 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| CCF14_RS27230 () | 15194..16186 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| CCF14_RS27235 () | 16195..16833 | + | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CCF14_RS27240 () | 16830..18638 | + | 1809 | WP_000821844.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CCF14_RS27245 () | 18665..18922 | + | 258 | WP_122988881.1 | conjugal transfer protein TrbE | - |
| CCF14_RS27250 () | 18915..19658 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CCF14_RS27255 () | 19774..20055 | + | 282 | WP_000549795.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CCF14_RS27260 () | 20042..20587 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CCF14_RS27265 () | 20517..20879 | + | 363 | WP_002430925.1 | P-type conjugative transfer protein TrbJ | - |
| CCF14_RS27270 () | 20879..22252 | + | 1374 | WP_170981808.1 | conjugal transfer protein TraH | - |
| CCF14_RS27275 () | 22249..25071 | + | 2823 | WP_099588275.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CCF14_RS27280 () | 25086..25589 | + | 504 | WP_099588276.1 | surface exclusion protein | - |
| CCF14_RS27285 () | 25621..26352 | + | 732 | WP_001447147.1 | complement resistance protein TraT | - |
| CCF14_RS27290 () | 26604..28793 | + | 2190 | WP_001360340.1 | type IV conjugative transfer system coupling protein TraD | - |
| CCF14_RS27295 () | 28793..34063 | + | 5271 | WP_099588277.1 | Multifunctional conjugation protein TraI | Relaxase |
| CCF14_RS27300 () | 34083..34829 | + | 747 | WP_000205759.1 | conjugal transfer pilus acetylase TraX | - |
| CCF14_RS27305 () | 34884..35444 | + | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| CCF14_RS27310 () | 35582..35794 | + | 213 | WP_001311693.1 | hypothetical protein | - |
| CCF14_RS27315 () | 36037..36498 | + | 462 | WP_001233871.1 | thermonuclease family protein | - |
| CCF14_RS27320 () | 36544..36753 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| CCF14_RS27325 () | 36791..37364 | + | 574 | Protein_41 | DUF2726 domain-containing protein | - |
| CCF14_RS27330 () | 37603..37863 | + | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| CCF14_RS27340 () | 38089..38163 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CCF14_RS27345 () | 38156..39013 | + | 858 | WP_157760426.1 | incFII family plasmid replication initiator RepA | - |
| CCF14_RS27355 () | 39928..40197 | + | 270 | WP_000079943.1 | hypothetical protein | Antitoxin Detail |
| CCF14_RS27360 () | 40194..40475 | + | 282 | WP_000969983.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCF14_RS27365 () | 40521..41369 | + | 849 | WP_001058012.1 | 3'-5' exonuclease | - |
| CCF14_RS27370 () | 41486..41968 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| CCF14_RS27375 () | 42090..42326 | + | 237 | Protein_49 | transposase | - |
| CCF14_RS27385 () | 42649..43346 | - | 698 | Protein_50 | IS1 family transposase IS1G | Transposase |
| CCF14_RS27395 () | 43448..43771 | - | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| CCF14_RS27400 () | 43877..45010 | + | 1134 | WP_001089730.1 | permease | - |
| CCF14_RS27405 () | 45138..45542 | - | 405 | Protein_53 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CCF14_RS27410 () | 45710..48697 | + | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| CCF14_RS27415 () | 48671..49459 | - | 789 | WP_052943198.1 | hypothetical protein | ARG |
| CCF14_RS27420 () | 49459..50262 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CCF14_RS27425 () | 50662..52098 | - | 1437 | WP_000105382.1 | glutathione synthase | - |
| CCF14_RS27430 () | 52203..52343 | + | 141 | Protein_58 | helix-turn-helix transcriptional regulator | - |
| CCF14_RS27435 () | 52407..53111 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CCF14_RS27440 () | 53166..55685 | + | 2520 | Protein_60 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| CCF14_RS27445 () | 55717..56291 | - | 575 | Protein_61 | IS3 family transposase IS2 | Transposase |
| CCF14_RS27450 () | 56287..58038 | + | 1752 | WP_049884581.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| CCF14_RS27455 () | 58087..59376 | + | 1290 | WP_044502556.1 | arsenite efflux transporter membrane subunit ArsB | - |
| CCF14_RS27460 () | 59389..59814 | + | 426 | WP_011117598.1 | glutaredoxin-dependent arsenate reductase | - |
| CCF14_RS27465 () | 59849..60385 | - | 537 | WP_011117599.1 | L-amino acid N-acyltransferase MnaT | VF |
| CCF14_RS27470 () | 60597..61409 | + | 813 | WP_011117600.1 | sulfite exporter TauE/SafE family protein | - |
| CCF14_RS27475 () | 61472..61840 | + | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| CCF14_RS27480 () | 61914..63665 | - | 1752 | WP_023171140.1 | Arsenical pump-driving ATPase | VF |
| CCF14_RS27485 () | 63692..64054 | - | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| CCF14_RS27490 () | 64130..64675 | - | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| CCF14_RS27495 () | 64684..65394 | - | 711 | WP_024159726.1 | arsenical resistance protein ArsH | - |
| CCF14_RS27500 () | 65495..65818 | - | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| CCF14_RS27505 () | 65923..66960 | + | 1038 | WP_044502555.1 | permease | - |
| CCF14_RS27510 () | 67253..67870 | - | 618 | WP_000521603.1 | hypothetical protein | - |
| CCF14_RS27515 () | 68062..69618 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| CCF14_RS27520 () | 69881..70471 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| CCF14_RS27525 () | 70471..70728 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| CCF14_RS27530 () | 71082..73220 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| CCF14_RS27535 () | 73382..73798 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CCF14_RS27540 () | 73795..74025 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CCF14_RS27550 () | 74321..74611 | + | 291 | WP_000111771.1 | hypothetical protein | - |
| CCF14_RS27555 () | 74601..75500 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| CCF14_RS27560 () | 75550..77775 | - | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| CCF14_RS27565 () | 77777..78865 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| CCF14_RS27580 () | 79443..79661 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CCF14_RS27585 () | 79663..79968 | + | 306 | WP_097492536.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CCF14_RS27590 () | 79969..80775 | + | 807 | WP_024197775.1 | site-specific integrase | - |
| CCF14_RS27600 () | 81462..82193 | - | 732 | WP_000504263.1 | replication initiation protein | - |
| CCF14_RS27605 () | 82814..84019 | + | 1206 | WP_001401628.1 | Plasmid partition protein A | VF |
| CCF14_RS27610 () | 84016..84987 | + | 972 | WP_001233384.1 | ParB/RepB/Spo0J family partition protein | - |
| CCF14_RS27620 () | 85124..86269 | - | 1146 | Protein_91 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CCF14_RS27625 () | 86332..87330 | + | 999 | WP_000549075.1 | IS91 family transposase ISMno24 | Transposase |
| CCF14_RS27630 () | 87327..88238 | + | 912 | WP_024210471.1 | hypothetical protein | - |
| CCF14_RS27635 () | 88315..89538 | + | 1224 | WP_099588280.1 | tyrosine-type recombinase/integrase | - |
| CCF14_RS27640 () | 89585..90103 | - | 519 | WP_000993248.1 | hypothetical protein | - |
| CCF14_RS27645 () | 90116..90970 | - | 855 | WP_001280973.1 | WYL domain-containing protein | - |
| CCF14_RS27650 () | 91105..92286 | + | 1182 | WP_000729190.1 | hypothetical protein | - |
| CCF14_RS27655 () | 92283..94511 | + | 2229 | WP_000575188.1 | ThiF family adenylyltransferase | - |
| CCF14_RS27660 () | 94556..94684 | - | 129 | Protein_99 | protein ImpB | - |
| CCF14_RS27665 () | 94684..95121 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CCF14_RS27670 () | 95118..95366 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CCF14_RS27680 () | 95784..96686 | + | 903 | WP_137445743.1 | DUF1281 domain-containing protein | - |
| CCF14_RS27685 () | 96690..96995 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| CCF14_RS27690 () | 97072..97755 | + | 684 | WP_099588282.1 | DNA methylase | - |
| CCF14_RS27695 () | 97756..97977 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| CCF14_RS27700 () | 97871..98425 | + | 555 | WP_099588283.1 | DUF1380 family protein | - |
| CCF14_RS27705 () | 98471..99247 | + | 777 | WP_099588284.1 | hypothetical protein | - |
| CCF14_RS27710 () | 99324..100436 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CCF14_RS27720 () | 101137..101439 | + | 303 | WP_072128676.1 | antirestriction protein | - |
| CCF14_RS27725 () | 101439..101900 | + | 462 | WP_137445756.1 | DUF1380 family protein | - |
| CCF14_RS27730 () | 101900..102091 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CCF14_RS27735 () | 102453..102704 | + | 252 | WP_157760427.1 | hypothetical protein | - |
| CCF14_RS27745 () | 103130..103360 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CCF14_RS27750 () | 103412..104773 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| CCF14_RS27755 () | 104821..105384 | + | 564 | WP_099588285.1 | class I SAM-dependent methyltransferase | - |
| CCF14_RS28565 () | 105762..106097 | + | 336 | WP_014106969.1 | hypothetical protein | - |
| CCF14_RS28570 () | 106010..106234 | + | 225 | WP_089571171.1 | single-stranded DNA-binding protein | - |
| CCF14_RS27780 () | 106702..107271 | - | 570 | WP_099588286.1 | hypothetical protein | - |
| CCF14_RS27785 () | 107256..108473 | - | 1218 | Protein_119 | IS3 family transposase IS2 | Transposase |
| CCF14_RS27795 () | 108537..109331 | + | 795 | WP_099588287.1 | site-specific integrase | - |
| CCF14_RS27800 () | 109489..110499 | + | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| CCF14_RS27805 () | 110595..112721 | + | 2127 | WP_099588288.1 | alpha-galactosidase | - |
| CCF14_RS27810 () | 112784..114061 | + | 1278 | WP_001083369.1 | MFS transporter | - |
| CCF14_RS27815 () | 114058..115491 | + | 1434 | WP_024170639.1 | glycoside hydrolase family 32 protein | - |
| CCF14_RS27820 () | 115685..117079 | + | 1395 | WP_099588289.1 | carbohydrate porin | - |
| CCF14_RS27830 () | 117325..118101 | - | 777 | WP_099588290.1 | thiosulfate reductase cytochrome B subunit | - |
| CCF14_RS27835 () | 118162..118809 | + | 648 | WP_001295212.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS27840 () | 118809..119156 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS27845 () | 119176..120747 | + | 1572 | WP_099588291.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS27850 () | 120811..121086 | + | 276 | WP_077631319.1 | hypothetical protein | - |
| - () | 121062..121210 | + | 149 | NuclAT_0 | - | - |
| - () | 121062..121210 | + | 149 | NuclAT_0 | - | - |
| - () | 121062..121210 | + | 149 | NuclAT_0 | - | - |
| - () | 121062..121210 | + | 149 | NuclAT_0 | - | - |
| CCF14_RS27860 () | 121218..122291 | - | 1074 | WP_099588292.1 | IS481 family transposase ISKpn28 | Transposase |
| CCF14_RS27865 () | 122363..122521 | + | 159 | WP_012817833.1 | type I toxin-antitoxin system Hok family toxin | - |
| CCF14_RS28340 () | 122540..122707 | + | 168 | WP_012817834.1 | hypothetical protein | - |
| CCF14_RS28345 () | 122979..123224 | + | 246 | WP_198406519.1 | hypothetical protein | - |
| CCF14_RS27880 () | 123456..123752 | + | 297 | WP_089634695.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|