MGE detailed information
MGE type: Mobilizable plasmid MGE length: 119846 bp
Accession: NZ_CP024262 Location: 1..119846 Organism: Escherichia coli strain F5656C1 Replicon: plasmid unnamed2
Accession: NZ_CP024262 Location: 1..119846 Organism: Escherichia coli strain F5656C1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4V61_RS25100 () | 758..949 | - | 192 | WP_122994480.1 | ANR family transcriptional regulator | - |
| A4V61_RS25110 () | 1135..2369 | + | 1235 | WP_164968891.1 | IS3 family transposase IS2 | Transposase |
| A4V61_RS25115 () | 2535..3229 | + | 695 | WP_085950855.1 | IS1 family transposase | - |
| A4V61_RS26215 () | 3318..3545 | - | 228 | WP_140159966.1 | hypothetical protein | - |
| A4V61_RS25120 () | 3586..4263 | + | 678 | WP_001704819.1 | IS66 family transposase ISCro1 | Transposase |
| A4V61_RS25125 () | 4263..4610 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| A4V61_RS25130 () | 4630..6201 | + | 1572 | WP_000381401.1 | IS66 family transposase ISCro1 | Transposase |
| A4V61_RS26405 () | 6248..6424 | - | 177 | Protein_8 | IS3 family transposase ISBope1 | Transposase |
| A4V61_RS25140 () | 6525..6886 | + | 362 | Protein_9 | Tn3 family transposase | - |
| A4V61_RS25145 () | 7652..11746 | + | 4095 | WP_001394776.1 | Serine protease EatA | VF |
| A4V61_RS25150 () | 12089..12792 | - | 704 | Protein_11 | helix-turn-helix domain-containing protein | - |
| A4V61_RS25155 () | 13040..13719 | + | 680 | Protein_12 | EAL domain-containing protein | - |
| A4V61_RS25165 () | 14159..14800 | - | 642 | WP_001705742.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| A4V61_RS25170 () | 15130..15843 | - | 714 | WP_000016957.1 | site-specific integrase | - |
| A4V61_RS25175 () | 15844..16149 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A4V61_RS25180 () | 16151..16369 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A4V61_RS25190 () | 16814..17071 | + | 258 | WP_000343092.1 | hypothetical protein | - |
| A4V61_RS25195 () | 17071..17601 | + | 531 | WP_011387704.1 | hypothetical protein | - |
| A4V61_RS25200 () | 17845..18687 | + | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| A4V61_RS25205 () | 18690..19778 | + | 1089 | WP_064734538.1 | putative hexosyltransferase CapU | - |
| A4V61_RS25210 () | 19783..20733 | + | 951 | WP_001699589.1 | virulence factor VirK | - |
| A4V61_RS25215 () | 20798..21742 | + | 945 | WP_001420717.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| A4V61_RS25220 () | 21804..22049 | - | 246 | Protein_23 | IS630 family transposase | - |
| A4V61_RS25225 () | 22136..22354 | + | 219 | Protein_24 | IS91 family transposase ISEc37 | Transposase |
| A4V61_RS25235 () | 22543..22644 | - | 102 | Protein_25 | methionyl-tRNA formyltransferase | - |
| A4V61_RS25240 () | 22659..23168 | - | 510 | WP_000115001.1 | peptide deformylase | - |
| A4V61_RS25245 () | 23545..23832 | - | 288 | WP_000865086.1 | helix-turn-helix transcriptional regulator | - |
| A4V61_RS25250 () | 23832..24143 | - | 312 | WP_000483538.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| A4V61_RS25265 () | 25115..25972 | - | 858 | WP_072328067.1 | incFII family plasmid replication initiator RepA | - |
| A4V61_RS25270 () | 25965..26039 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| A4V61_RS25280 () | 26276..26530 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| A4V61_RS25285 () | 26770..27360 | - | 591 | WP_001393319.1 | DUF2726 domain-containing protein | - |
| A4V61_RS25290 () | 27512..28138 | - | 627 | WP_001393151.1 | hypothetical protein | - |
| A4V61_RS25295 () | 28550..28759 | - | 210 | WP_001297500.1 | hypothetical protein | - |
| A4V61_RS25300 () | 28890..29450 | - | 561 | WP_000840475.1 | fertility inhibition protein FinO | - |
| A4V61_RS25305 () | 29553..30413 | - | 861 | WP_000704511.1 | putative protein YcjY | VF |
| A4V61_RS25310 () | 30472..30954 | - | 483 | Protein_37 | type-F conjugative transfer system pilin acetylase TraX | - |
| A4V61_RS25315 () | 30957..32162 | - | 1206 | Protein_38 | conjugal transfer protein TraH | - |
| A4V61_RS25320 () | 32149..32541 | - | 393 | WP_000138370.1 | F-type conjugal transfer protein TrbF | - |
| A4V61_RS25325 () | 32495..32869 | - | 375 | WP_071594518.1 | P-type conjugative transfer protein TrbJ | - |
| A4V61_RS25330 () | 32799..33128 | - | 330 | Protein_41 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A4V61_RS25335 () | 33281..34009 | - | 729 | WP_001230775.1 | type-F conjugative transfer system secretin TraK | - |
| A4V61_RS25340 () | 33996..34562 | - | 567 | WP_000399782.1 | type IV conjugative transfer system protein TraE | - |
| A4V61_RS25345 () | 34584..34895 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| A4V61_RS25350 () | 34900..35262 | - | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| A4V61_RS25355 () | 35295..35522 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| A4V61_RS25360 () | 35659..36330 | - | 672 | WP_072328069.1 | conjugal transfer transcriptional regulator TraJ | - |
| A4V61_RS25370 () | 36452..37432 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| A4V61_RS25380 () | 37723..38106 | - | 384 | WP_000124827.1 | relaxosome protein TraM | - |
| A4V61_RS25390 () | 38429..39031 | + | 603 | WP_013188482.1 | hypothetical protein | VF |
| A4V61_RS25395 () | 39327..40148 | - | 822 | WP_001393327.1 | DUF945 domain-containing protein | - |
| A4V61_RS25400 () | 40265..40552 | - | 288 | WP_000107522.1 | hypothetical protein | - |
| A4V61_RS25410 () | 40708..41010 | - | 303 | WP_001272235.1 | hypothetical protein | - |
| A4V61_RS26410 () | 41327..41687 | + | 361 | Protein_54 | hypothetical protein | - |
| A4V61_RS25430 () | 41925..42083 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 42148..42342 | - | 195 | NuclAT_0 | - | - |
| - () | 42148..42342 | - | 195 | NuclAT_0 | - | - |
| - () | 42148..42342 | - | 195 | NuclAT_0 | - | - |
| - () | 42148..42342 | - | 195 | NuclAT_0 | - | - |
| A4V61_RS25435 () | 42354..43073 | - | 720 | WP_001276221.1 | plasmid SOS inhibition protein A | - |
| A4V61_RS25440 () | 43070..43504 | - | 435 | WP_000845954.1 | conjugation system SOS inhibitor PsiB | - |
| A4V61_RS26415 () | 43559..45526 | - | 1968 | Protein_58 | ParB/RepB/Spo0J family partition protein | - |
| A4V61_RS25455 () | 45601..45957 | - | 357 | Protein_59 | IS3 family transposase IS911 | Transposase |
| A4V61_RS25460 () | 46022..47173 | + | 1152 | WP_001254933.1 | IS30 family transposase IS30D | Transposase |
| A4V61_RS25465 () | 47180..48076 | + | 897 | Protein_61 | IS3 family transposase ISSd1 | Transposase |
| A4V61_RS25470 () | 48397..48771 | - | 375 | WP_013188479.1 | Heat-labile enterotoxin B chain | VF |
| A4V61_RS25475 () | 48768..49544 | - | 777 | WP_001378495.1 | Heat-labile enterotoxin A chain | VF |
| A4V61_RS25485 () | 49860..50132 | + | 273 | WP_000019162.1 | hypothetical protein | - |
| A4V61_RS25490 () | 50113..50604 | + | 492 | Protein_65 | IS91 family transposase ISSbo1 | Transposase |
| A4V61_RS25495 () | 50754..51049 | + | 296 | Protein_66 | IS3 family transposase ISCARN101 | Transposase |
| A4V61_RS25500 () | 51154..51893 | + | 740 | Protein_67 | IS3 family transposase IS629 | Transposase |
| A4V61_RS25510 () | 52566..54074 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| A4V61_RS25515 () | 54158..54637 | + | 480 | Protein_69 | IS3 family transposase IS629 | Transposase |
| A4V61_RS25520 () | 54681..55547 | - | 867 | Protein_70 | IS110 family transposase ISEc45 | Transposase |
| A4V61_RS25525 () | 55608..55802 | + | 195 | Protein_71 | transposase domain-containing protein | - |
| A4V61_RS25530 () | 56068..56274 | - | 207 | Protein_72 | IS5 family transposase IS903B | Transposase |
| A4V61_RS25535 () | 56425..56643 | - | 219 | WP_013188501.1 | Heat-stable enterotoxin A3/A4 | VF |
| A4V61_RS25540 () | 57021..57440 | + | 420 | Protein_74 | IS3 family transposase ISBmu11 | Transposase |
| A4V61_RS25545 () | 57633..57962 | + | 330 | WP_000471255.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| A4V61_RS25550 () | 57943..58224 | + | 282 | WP_000780221.1 | helix-turn-helix transcriptional regulator | - |
| A4V61_RS25560 () | 58547..59491 | + | 945 | WP_000710536.1 | hypothetical protein | - |
| A4V61_RS25565 () | 59558..59908 | - | 351 | WP_001393279.1 | plasmid partitioning/stability family protein | - |
| A4V61_RS25570 () | 59911..60873 | - | 963 | WP_000959870.1 | plasmid segregation protein ParM | - |
| A4V61_RS25575 () | 60888..61236 | + | 349 | Protein_80 | hypothetical protein | - |
| A4V61_RS25580 () | 61340..62356 | + | 1017 | WP_000219392.1 | IS110 family transposase ISShdy1 | Transposase |
| A4V61_RS25585 () | 62472..63680 | + | 1209 | WP_000343720.1 | IS256 family transposase IS1414 | Transposase |
| A4V61_RS25590 () | 63677..63850 | + | 174 | WP_044307862.1 | transposase domain-containing protein | - |
| A4V61_RS25595 () | 63947..64174 | + | 228 | Protein_84 | IS21 family transposase | - |
| A4V61_RS25600 () | 64243..64737 | - | 495 | WP_001203081.1 | DUF2919 family protein | - |
| A4V61_RS25605 () | 64734..66647 | - | 1914 | WP_001393184.1 | UDP-glucose:protein N-beta-glucosyltransferase | VF |
| A4V61_RS25610 () | 66719..66904 | - | 186 | WP_000894830.1 | hypothetical protein | - |
| A4V61_RS25615 () | 66929..71557 | - | 4629 | WP_013188499.1 | filamentous hemagglutinin N-terminal domain-containing protein | - |
| A4V61_RS25620 () | 71647..73458 | - | 1812 | WP_001393122.1 | Heme/hemopexin transporter protein HuxB | VF |
| A4V61_RS25625 () | 73661..74269 | - | 609 | Protein_90 | IS3 family transposase IS2 | Transposase |
| A4V61_RS25630 () | 74351..74716 | + | 366 | WP_000124092.1 | hypothetical protein | - |
| A4V61_RS25635 () | 74716..75899 | + | 1184 | Protein_92 | IS91 family transposase ISEc37 | Transposase |
| A4V61_RS25640 () | 75927..77090 | + | 1164 | Protein_93 | IS3 family transposase ISEc17 | Transposase |
| A4V61_RS25645 () | 77143..77517 | + | 375 | Protein_94 | IS1 family transposase | - |
| A4V61_RS25650 () | 77589..78833 | - | 1245 | WP_001416764.1 | hypothetical protein | - |
| A4V61_RS25655 () | 79102..80265 | - | 1164 | Protein_96 | IS3 family transposase ISEc17 | Transposase |
| A4V61_RS25660 () | 80332..80577 | - | 246 | Protein_97 | IS256 family transposase IS1414 | Transposase |
| A4V61_RS25665 () | 80739..81095 | - | 357 | WP_013188496.1 | hypothetical protein | - |
| A4V61_RS25680 () | 82974..84136 | - | 1163 | Protein_100 | IS3 family transposase ISEc17 | Transposase |
| A4V61_RS25685 () | 84319..84945 | - | 627 | WP_000593828.1 | ABC transporter ATP-binding protein | - |
| A4V61_RS25690 () | 84938..85705 | - | 768 | WP_001394312.1 | hypothetical protein | - |
| A4V61_RS25695 () | 85668..86870 | - | 1203 | WP_000836404.1 | TolC family protein | - |
| A4V61_RS25700 () | 86867..87997 | - | 1131 | WP_001394310.1 | hypothetical protein | - |
| A4V61_RS25705 () | 88556..89374 | - | 819 | Protein_105 | IS630 family transposase | - |
| A4V61_RS25710 () | 89421..89786 | + | 366 | WP_000124138.1 | hypothetical protein | - |
| A4V61_RS25715 () | 89786..90618 | + | 833 | Protein_107 | IS91 family transposase IS91 | Transposase |
| A4V61_RS25725 () | 90892..91589 | + | 698 | Protein_108 | IS1 family transposase IS1R | Transposase |
| A4V61_RS25730 () | 91712..91905 | - | 194 | Protein_109 | ANR family transcriptional regulator | - |
| A4V61_RS25735 () | 92104..92901 | + | 798 | WP_001530271.1 | CFA/I fimbrial subunit D | VF |
| A4V61_RS25740 () | 93270..94102 | - | 833 | Protein_111 | IS91 family transposase IS91 | Transposase |
| A4V61_RS25745 () | 94102..94467 | - | 366 | WP_032328454.1 | hypothetical protein | - |
| A4V61_RS25750 () | 94635..94889 | - | 255 | WP_001342360.1 | IS3 family transposase ISPa31 | Transposase |
| A4V61_RS26420 () | 95280..95786 | - | 507 | WP_013188494.1 | CS3 fimbrial subunit A | VF |
| A4V61_RS25760 () | 95808..96296 | - | 489 | WP_001704935.1 | hypothetical protein | - |
| A4V61_RS25765 () | 96416..98869 | - | 2454 | WP_001391303.1 | F1 capsule-anchoring protein | VF |
| A4V61_RS25770 () | 98835..99560 | - | 726 | WP_001391304.1 | Chaperone protein caf1M | VF |
| A4V61_RS25775 () | 99641..100621 | + | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| A4V61_RS25780 () | 101238..101490 | - | 253 | Protein_119 | integrase core domain-containing protein | - |
| A4V61_RS25785 () | 101617..102414 | - | 798 | WP_000544814.1 | IS21 family transposase IS21 | Transposase |
| A4V61_RS25790 () | 102414..103579 | - | 1166 | Protein_121 | IS21 family transposase IS21 | Transposase |
| A4V61_RS25795 () | 103661..103837 | - | 177 | Protein_122 | transposase domain-containing protein | - |
| A4V61_RS25800 () | 103898..105027 | + | 1130 | Protein_123 | IS110 family transposase ISEc45 | Transposase |
| A4V61_RS25805 () | 105280..106510 | - | 1231 | Protein_124 | IS66 family transposase | - |
| A4V61_RS25810 () | 106720..107028 | - | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| A4V61_RS25815 () | 107115..107759 | - | 645 | WP_001144037.1 | ParA family protein | - |
| A4V61_RS25820 () | 107937..108743 | - | 807 | WP_000016960.1 | site-specific integrase | - |
| A4V61_RS25825 () | 108744..109049 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A4V61_RS25830 () | 109051..109269 | - | 219 | WP_072328065.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A4V61_RS25845 () | 109791..110048 | + | 258 | WP_000343095.1 | hypothetical protein | - |
| A4V61_RS25850 () | 110048..110590 | + | 543 | WP_032328642.1 | hypothetical protein | - |
| A4V61_RS25855 () | 110834..111676 | + | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| A4V61_RS25860 () | 111679..112767 | + | 1089 | WP_064734538.1 | putative hexosyltransferase CapU | - |
| A4V61_RS25865 () | 112772..113722 | + | 951 | WP_001699589.1 | virulence factor VirK | - |
| A4V61_RS25870 () | 113787..114730 | + | 944 | Protein_135 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| A4V61_RS25875 () | 114792..115037 | - | 246 | Protein_136 | transposase | - |
| A4V61_RS25880 () | 115119..116305 | + | 1187 | Protein_137 | IS3 family transposase ISKpn38 | Transposase |
| A4V61_RS25885 () | 116367..116534 | - | 168 | Protein_138 | IS91 family transposase ISSbo1 | Transposase |
| A4V61_RS25890 () | 116582..118120 | - | 1539 | WP_000998103.1 | IS66 family transposase ISEc8 | Transposase |
| A4V61_RS25895 () | 118170..118517 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| A4V61_RS25900 () | 118514..118903 | - | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| A4V61_RS26425 () | 118942..119127 | - | 186 | Protein_142 | hypothetical protein | - |
| A4V61_RS25095 () | 119187..119846 | + | 660 | WP_095033723.1 | IS3-like element IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|