MGE detailed information
MGE type: Mobilizable plasmid MGE length: 94817 bp
Accession: NZ_CP024259 Location: 1..94817 Organism: Escherichia coli O25:H16 strain F5505-C1 Replicon: plasmid unnamed2
Accession: NZ_CP024259 Location: 1..94817 Organism: Escherichia coli O25:H16 strain F5505-C1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG37_RS26170 () | 499..1099 | - | 601 | Protein_0 | DUF2913 family protein | - |
| COG37_RS26175 () | 1639..2812 | + | 1174 | Protein_1 | IS21 family transposase | - |
| COG37_RS26180 () | 2812..3609 | + | 798 | WP_001736034.1 | IS21-like element IS21 family helper ATPase IstB | - |
| COG37_RS26185 () | 3669..3890 | - | 222 | Protein_3 | transposase | - |
| COG37_RS26190 () | 4045..4395 | + | 351 | WP_071598273.1 | hypothetical protein | - |
| COG37_RS26195 () | 4677..5816 | + | 1140 | WP_001736036.1 | hypothetical protein | - |
| COG37_RS26200 () | 5813..7018 | + | 1206 | WP_001736038.1 | TolC family protein | - |
| COG37_RS26205 () | 6975..7748 | + | 774 | WP_050438176.1 | hypothetical protein | - |
| COG37_RS26210 () | 7741..8367 | + | 627 | WP_024169892.1 | ABC transporter ATP-binding protein | - |
| COG37_RS26215 () | 8620..8865 | + | 246 | Protein_9 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| COG37_RS26220 () | 9237..9386 | - | 150 | WP_001399277.1 | ATP-binding protein | - |
| COG37_RS26225 () | 9405..10649 | - | 1245 | WP_032200284.1 | hypothetical protein | - |
| COG37_RS26235 () | 11896..12678 | - | 783 | WP_014640011.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| COG37_RS26240 () | 12675..13697 | - | 1023 | WP_000255946.1 | IS21-like element IS100 family transposase | - |
| COG37_RS26250 () | 13796..14475 | + | 680 | Protein_14 | hypothetical protein | - |
| COG37_RS27230 () | 14671..14775 | + | 105 | Protein_15 | transposase | - |
| COG37_RS26260 () | 15107..15289 | - | 183 | WP_071598279.1 | mdtC domain protein | - |
| COG37_RS26265 () | 15345..15869 | - | 525 | WP_024169893.1 | recombinase family protein | - |
| COG37_RS26275 () | 15970..16647 | + | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| COG37_RS26280 () | 16647..16994 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| COG37_RS26285 () | 17014..17481 | + | 468 | Protein_20 | IS66 family transposase | - |
| COG37_RS26290 () | 17538..18332 | - | 795 | WP_000544809.1 | IS21-like element helper ATPase IstB | - |
| COG37_RS26295 () | 18332..19504 | - | 1173 | WP_000952428.1 | IS21-like element ISEc62 family transposase | - |
| COG37_RS26300 () | 19608..20714 | + | 1107 | Protein_23 | IS66 family transposase | - |
| COG37_RS26310 () | 20878..22091 | + | 1214 | WP_170866389.1 | IS3 family transposase | - |
| COG37_RS26315 () | 22134..22742 | + | 609 | Protein_25 | transposase | - |
| COG37_RS26320 () | 22756..23056 | + | 301 | Protein_26 | integrase core domain-containing protein | - |
| COG37_RS26325 () | 23276..24139 | - | 864 | WP_001734642.1 | helix-turn-helix domain-containing protein | - |
| COG37_RS26330 () | 24258..24786 | - | 529 | Protein_28 | IS1 family transposase | - |
| COG37_RS26335 () | 25657..25848 | - | 192 | WP_024169750.1 | ANR family transcriptional regulator | - |
| COG37_RS26345 () | 26051..26848 | + | 798 | WP_001734638.1 | response regulator transcription factor | - |
| COG37_RS26355 () | 27491..28597 | + | 1107 | WP_032200404.1 | glycosyltransferase family 4 protein | - |
| COG37_RS26360 () | 28739..31011 | - | 2273 | Protein_32 | Tn3-like element TnEc1 family transposase | - |
| COG37_RS26365 () | 31212..31852 | + | 641 | Protein_33 | recombinase family protein | - |
| COG37_RS26370 () | 32174..32548 | - | 375 | WP_013188479.1 | heat-labile enterotoxin LT subunit B | - |
| COG37_RS26375 () | 32545..33321 | - | 777 | WP_001734409.1 | heat-labile enterotoxin LT subunit A | - |
| COG37_RS26380 () | 33556..33759 | + | 204 | Protein_36 | IS91 family transposase | - |
| COG37_RS26395 () | 34842..35699 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| COG37_RS26400 () | 35692..35766 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| COG37_RS26410 () | 35991..36251 | - | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
| COG37_RS26420 () | 36775..38139 | + | 1365 | Protein_40 | IS21-like element ISEc12 family transposase | - |
| COG37_RS26430 () | 39450..40010 | + | 561 | Protein_42 | IS21-like element ISEc12 family helper ATPase IstB | - |
| COG37_RS26435 () | 40081..40260 | - | 180 | WP_032199711.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 40252..40308 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 40252..40308 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 40252..40308 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 40252..40308 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| COG37_RS26445 () | 40552..40734 | + | 183 | WP_001393357.1 | hypothetical protein | - |
| COG37_RS26450 () | 40958..41689 | - | 732 | WP_001734655.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| COG37_RS26455 () | 41686..42252 | - | 567 | WP_024169751.1 | DUF2726 domain-containing protein | - |
| COG37_RS26460 () | 42270..47252 | - | 4983 | Protein_47 | conjugative transfer relaxase/helicase TraI | - |
| COG37_RS26465 () | 47622..48608 | - | 987 | WP_001734652.1 | conjugal transfer pilus assembly protein TraU | - |
| COG37_RS26470 () | 48605..49240 | - | 636 | WP_000286241.1 | type-F conjugative transfer system protein TraW | - |
| COG37_RS26475 () | 49243..49703 | - | 461 | Protein_50 | type-F conjugative transfer system protein TrbI | - |
| COG37_RS26480 () | 49700..52290 | - | 2591 | Protein_51 | type IV secretion system protein TraC | - |
| COG37_RS26485 () | 52301..52900 | - | 600 | WP_001735611.1 | type IV conjugative transfer system lipoprotein TraV | - |
| COG37_RS26490 () | 53007..53231 | - | 225 | WP_001735612.1 | TraR/DksA C4-type zinc finger protein | - |
| COG37_RS26495 () | 53343..54707 | - | 1365 | WP_001735613.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| COG37_RS26500 () | 54694..55434 | - | 741 | WP_099554542.1 | type-F conjugative transfer system secretin TraK | - |
| COG37_RS26505 () | 55424..55986 | - | 563 | Protein_56 | type IV conjugative transfer system protein TraE | - |
| COG37_RS26510 () | 56006..56311 | - | 306 | WP_001735616.1 | type IV conjugative transfer system protein TraL | - |
| COG37_RS26515 () | 56313..56672 | - | 360 | WP_001735617.1 | type IV conjugative transfer system pilin TraA | - |
| COG37_RS27060 () | 56770..56937 | - | 168 | WP_157187929.1 | hypothetical protein | - |
| COG37_RS26520 () | 57153..57434 | - | 282 | WP_000974581.1 | hypothetical protein | - |
| COG37_RS26525 () | 57914..58300 | - | 387 | WP_024169848.1 | relaxosome protein TraM | - |
| COG37_RS26535 () | 58927..60089 | + | 1163 | WP_099554545.1 | IS3-like element IS3 family transposase | - |
| COG37_RS26540 () | 60127..60213 | + | 87 | WP_071594245.1 | IS3 family transposase | - |
| COG37_RS26545 () | 60245..60337 | + | 93 | Protein_64 | integrase core domain-containing protein | - |
| COG37_RS26550 () | 60375..60461 | + | 87 | WP_071594245.1 | IS3 family transposase | - |
| COG37_RS26555 () | 60599..61063 | + | 465 | WP_001735678.1 | CS6 fimbrial subunit CssA | - |
| COG37_RS26560 () | 61081..61584 | + | 504 | WP_001297627.1 | CS6 fimbrial subunit CssB | - |
| COG37_RS26565 () | 61637..62335 | + | 699 | WP_024169853.1 | CS6 fimbrial biogenesis chaperone CssC | - |
| COG37_RS26570 () | 62292..64751 | + | 2460 | WP_157195932.1 | CS6 fimbrial usher CssD | - |
| COG37_RS26580 () | 65066..65626 | - | 561 | Protein_70 | IS3 family transposase | - |
| COG37_RS26585 () | 65688..67651 | + | 1964 | Protein_71 | ParB/RepB/Spo0J family partition protein | - |
| COG37_RS26590 () | 67706..68140 | + | 435 | WP_000845954.1 | conjugation system SOS inhibitor PsiB | - |
| COG37_RS26595 () | 68137..68856 | + | 720 | WP_001734594.1 | plasmid SOS inhibition protein A | - |
| - () | 68868..69062 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68868..69062 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68868..69062 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68868..69062 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| COG37_RS26605 () | 69127..69285 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| COG37_RS26610 () | 69579..71150 | - | 1572 | WP_099554548.1 | IS66 family transposase | - |
| COG37_RS26615 () | 71170..71517 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| COG37_RS26620 () | 71517..72194 | - | 678 | WP_099554551.1 | IS66-like element accessory protein TnpA | - |
| COG37_RS27235 () | 72504..72695 | + | 192 | Protein_78 | hypothetical protein | - |
| COG37_RS26635 () | 72748..73425 | + | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| COG37_RS26640 () | 73425..73772 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| COG37_RS26645 () | 73792..75363 | + | 1572 | WP_000381395.1 | IS66 family transposase | - |
| COG37_RS26650 () | 75549..79649 | - | 4101 | WP_099558425.1 | serine protease autotransporter toxin EatA | - |
| COG37_RS26655 () | 79928..80622 | + | 695 | WP_088563528.1 | IS1 family transposase | - |
| COG37_RS26665 () | 81140..82353 | + | 1214 | WP_164997627.1 | IS3 family transposase | - |
| COG37_RS26670 () | 82398..83434 | + | 1037 | Protein_85 | IS3-like element IS3 family transposase | - |
| COG37_RS26675 () | 83579..83995 | - | 417 | WP_001735279.1 | plasmid partitioning/stability family protein | - |
| COG37_RS26680 () | 83988..84968 | - | 981 | WP_001735280.1 | plasmid segregation protein ParM | - |
| COG37_RS26685 () | 85380..85688 | - | 309 | WP_001735282.1 | hypothetical protein | - |
| COG37_RS26690 () | 85778..86419 | - | 642 | WP_001735283.1 | ParA family protein | - |
| COG37_RS26695 () | 86599..86799 | - | 201 | Protein_90 | tyrosine-type recombinase/integrase | - |
| COG37_RS26710 () | 88304..89380 | + | 1077 | WP_001734574.1 | IS110-like element ISEc21 family transposase | - |
| COG37_RS26715 () | 89397..89705 | + | 309 | Protein_93 | DDE-type integrase/transposase/recombinase | - |
| COG37_RS26720 () | 90438..90629 | + | 192 | WP_001736027.1 | hypothetical protein | - |
| COG37_RS26725 () | 90680..91366 | + | 687 | WP_024169890.1 | molecular chaperone | - |
| COG37_RS26730 () | 91378..93810 | + | 2433 | WP_001736029.1 | fimbrial biogenesis outer membrane usher protein | - |
| COG37_RS26735 () | 94015..94392 | - | 378 | WP_024169891.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|