MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 145086 bp
Accession: NZ_CP024227 Location: 1..145086 Organism: Escherichia coli O169:H41 strain 2014EL-1345-2 Replicon: plasmid unnamed4
Accession: NZ_CP024227 Location: 1..145086 Organism: Escherichia coli O169:H41 strain 2014EL-1345-2 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJV63_RS26035 () | 177..959 | + | 783 | Protein_1 | IS21 family transposase IS100kyp | Transposase |
| CJV63_RS26045 () | 1024..1851 | + | 828 | Protein_2 | IS66 family transposase ISEc8 | Transposase |
| CJV63_RS26050 () | 1924..3133 | + | 1210 | Protein_3 | IS256 family transposase IS1414 | Transposase |
| CJV63_RS27290 () | 3169..3270 | + | 102 | Protein_4 | transposase domain-containing protein | - |
| CJV63_RS26055 () | 3309..4169 | + | 861 | Protein_5 | IS91 family transposase ISSbo1 | Transposase |
| CJV63_RS26060 () | 4359..4571 | + | 213 | Protein_6 | helix-turn-helix domain-containing protein | - |
| CJV63_RS26065 () | 4576..4815 | + | 240 | Protein_7 | IS21 family transposase | - |
| CJV63_RS26070 () | 4832..5587 | + | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| CJV63_RS26080 () | 5680..5832 | + | 153 | Protein_9 | IS3 family transposase | - |
| CJV63_RS26085 () | 5878..5997 | + | 120 | Protein_10 | IS200/IS605 family transposase | - |
| CJV63_RS26090 () | 6390..6578 | + | 189 | WP_001595165.1 | hypothetical protein | - |
| CJV63_RS26095 () | 6726..7937 | + | 1212 | WP_001717882.1 | biotin/lipoyl-binding protein | - |
| CJV63_RS26100 () | 7934..10030 | + | 2097 | WP_001717881.1 | ATP-binding cassette domain-containing protein | - |
| CJV63_RS27295 () | 10034..10924 | + | 891 | WP_001717880.1 | hypothetical protein | - |
| CJV63_RS26110 () | 11064..11483 | + | 420 | WP_001595160.1 | IS66 family transposase ISEc23 | Transposase |
| CJV63_RS26115 () | 11480..11830 | + | 351 | WP_001464094.1 | IS66 family transposase IS682 | Transposase |
| CJV63_RS26120 () | 11861..12829 | + | 969 | Protein_17 | IS66 family transposase ISEc47 | Transposase |
| CJV63_RS26125 () | 12861..13295 | + | 435 | WP_001595158.1 | DUF1380 family protein | - |
| CJV63_RS26130 () | 13340..13903 | + | 564 | Protein_19 | hypothetical protein | - |
| CJV63_RS26135 () | 13934..15547 | - | 1614 | WP_099490935.1 | IS66 family transposase ISEc23 | Transposase |
| CJV63_RS26140 () | 15578..15928 | - | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| CJV63_RS26145 () | 15925..16350 | - | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| CJV63_RS26150 () | 16447..17397 | - | 951 | WP_023486370.1 | virulence factor VirK | - |
| CJV63_RS26155 () | 17402..18490 | - | 1089 | WP_024171602.1 | putative hexosyltransferase CapU | - |
| CJV63_RS26160 () | 18493..19335 | - | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| CJV63_RS26170 () | 19578..20119 | - | 542 | Protein_26 | hypothetical protein | - |
| CJV63_RS26175 () | 20119..20376 | - | 258 | WP_001595062.1 | hypothetical protein | - |
| CJV63_RS26180 () | 20853..21266 | + | 414 | WP_001595064.1 | hypothetical protein | - |
| CJV63_RS26185 () | 21361..21567 | + | 207 | Protein_29 | tyrosine-type recombinase/integrase | - |
| CJV63_RS26190 () | 21616..21900 | + | 285 | Protein_30 | IS3 family transposase ISEcB1 | Transposase |
| CJV63_RS26195 () | 21946..22389 | + | 444 | Protein_31 | IS1 family transposase IS1N | Transposase |
| CJV63_RS26200 () | 22681..23553 | - | 873 | WP_001595072.1 | K88 fimbrial protein AB | VF |
| CJV63_RS26205 () | 23573..24403 | - | 831 | WP_001595073.1 | K88 fimbrial protein AC | VF |
| CJV63_RS26210 () | 24552..24851 | - | 300 | WP_032201317.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CJV63_RS26215 () | 24989..25732 | - | 744 | WP_001595074.1 | hypothetical protein | - |
| CJV63_RS26220 () | 25743..26507 | - | 765 | WP_001595075.1 | hypothetical protein | VF |
| CJV63_RS26225 () | 26524..27291 | - | 768 | WP_024171421.1 | hypothetical protein | VF |
| CJV63_RS26230 () | 27436..27939 | - | 504 | WP_001595078.1 | hypothetical protein | VF |
| CJV63_RS26235 () | 27981..28664 | - | 684 | WP_050437387.1 | Chaperone protein FaeE | VF |
| CJV63_RS26240 () | 28708..31107 | - | 2400 | WP_023486680.1 | Outer membrane usher protein YraJ | VF |
| CJV63_RS26245 () | 31117..31635 | - | 519 | WP_001595081.1 | hypothetical protein | VF |
| CJV63_RS26250 () | 31728..32003 | - | 276 | WP_001595082.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CJV63_RS27300 () | 32486..32587 | + | 102 | Protein_43 | transposase | - |
| CJV63_RS26265 () | 33066..33431 | - | 366 | Protein_44 | IS1 family transposase IS1N | Transposase |
| CJV63_RS26275 () | 33585..34736 | + | 1152 | WP_001702847.1 | IS30 family transposase IS30D | Transposase |
| CJV63_RS26280 () | 34768..36289 | - | 1522 | Protein_46 | IS3 family transposase | - |
| CJV63_RS26290 () | 37946..38263 | - | 318 | Protein_47 | ISL3 family transposase ISEc38 | Transposase |
| CJV63_RS26295 () | 38324..38500 | - | 177 | Protein_48 | IS21 family transposase IS21 | Transposase |
| CJV63_RS26300 () | 38617..38829 | + | 213 | WP_001717486.1 | hypothetical protein | - |
| CJV63_RS26310 () | 39515..40123 | + | 609 | WP_099490937.1 | proQ/FINO family protein | - |
| CJV63_RS26315 () | 40344..40709 | + | 366 | Protein_51 | transposase | - |
| CJV63_RS26320 () | 40703..40924 | + | 222 | Protein_52 | IS91 family transposase | - |
| CJV63_RS26325 () | 41283..42107 | - | 825 | WP_001595093.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CJV63_RS26330 () | 42113..43177 | - | 1065 | WP_001595094.1 | hypothetical protein | - |
| CJV63_RS26335 () | 43192..44217 | - | 1026 | WP_001595096.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CJV63_RS26340 () | 44204..45535 | - | 1332 | WP_024171392.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CJV63_RS26345 () | 45733..46221 | - | 489 | WP_001595098.1 | hypothetical protein | - |
| CJV63_RS26350 () | 46209..47036 | - | 828 | WP_001595099.1 | hypothetical protein | - |
| CJV63_RS26355 () | 47038..47598 | - | 561 | WP_001595100.1 | hypothetical protein | - |
| CJV63_RS26360 () | 47601..49058 | - | 1458 | WP_001717441.1 | type II/III secretion system protein | - |
| CJV63_RS26365 () | 49075..49494 | - | 420 | WP_024171393.1 | hypothetical protein | VF |
| CJV63_RS26370 () | 49513..51081 | - | 1569 | WP_024171394.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CJV63_RS26375 () | 51142..51852 | - | 711 | WP_149007421.1 | Toxin coregulated pilin | VF |
| CJV63_RS26380 () | 52156..52599 | - | 444 | WP_001595106.1 | hypothetical protein | VF |
| CJV63_RS26385 () | 52607..53449 | - | 843 | WP_001595107.1 | helix-turn-helix domain-containing protein | - |
| CJV63_RS26390 () | 53724..54023 | - | 300 | WP_024171395.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CJV63_RS26395 () | 54512..54640 | + | 129 | Protein_67 | transcriptional regulator | - |
| CJV63_RS26400 () | 54761..55501 | + | 741 | WP_001717448.1 | IS91 family transposase ISMno23 | Transposase |
| CJV63_RS26405 () | 55591..57112 | + | 1522 | Protein_69 | IS3 family transposase | - |
| CJV63_RS26410 () | 57470..58447 | - | 978 | WP_023486339.1 | RepB family plasmid replication initiator protein | - |
| CJV63_RS26425 () | 59320..60497 | - | 1178 | Protein_71 | IS91 family transposase ISEc37 | Transposase |
| CJV63_RS26430 () | 60497..60793 | - | 297 | WP_000766063.1 | hypothetical protein | - |
| CJV63_RS26435 () | 60897..61223 | - | 327 | WP_001595119.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CJV63_RS26440 () | 61220..61471 | - | 252 | WP_001595120.1 | hypothetical protein | Antitoxin Detail |
| CJV63_RS26445 () | 62025..62891 | + | 867 | WP_001595122.1 | AAA family ATPase | - |
| CJV63_RS26450 () | 62891..63922 | + | 1032 | WP_001595123.1 | ParB/RepB/Spo0J family partition protein | - |
| CJV63_RS26455 () | 63946..64359 | + | 414 | WP_032159708.1 | hypothetical protein | - |
| CJV63_RS27495 () | 64356..64679 | + | 324 | WP_000143877.1 | hypothetical protein | - |
| CJV63_RS26465 () | 64718..65992 | - | 1275 | WP_001595125.1 | Y-family DNA polymerase | - |
| CJV63_RS26470 () | 65992..66414 | - | 423 | WP_001595126.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CJV63_RS26475 () | 66717..67670 | + | 954 | Protein_81 | ISL3 family transposase ISEc38 | Transposase |
| CJV63_RS26480 () | 67675..68082 | - | 408 | Protein_82 | ISL3 family transposase ISEc38 | Transposase |
| CJV63_RS26485 () | 68132..68479 | - | 348 | WP_001595131.1 | IS66 family transposase ISEc8 | Transposase |
| CJV63_RS27500 () | 68476..68856 | - | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| CJV63_RS26495 () | 68950..69360 | + | 411 | Protein_85 | IS3 family transposase ISSfl10 | Transposase |
| CJV63_RS26500 () | 69404..70546 | + | 1143 | Protein_86 | IS4 family transposase IS186B | Transposase |
| CJV63_RS26505 () | 70784..71059 | + | 276 | Protein_87 | incFII family plasmid replication initiator RepA | - |
| CJV63_RS26510 () | 71091..71258 | + | 168 | Protein_88 | IS91 family transposase | - |
| CJV63_RS26515 () | 71574..71771 | - | 198 | WP_001413878.1 | ANR family transcriptional regulator | - |
| CJV63_RS26520 () | 71969..72766 | + | 798 | WP_001595134.1 | CFA/I fimbrial subunit D | VF |
| CJV63_RS26525 () | 73134..73370 | - | 237 | Protein_91 | IS91 family transposase | - |
| CJV63_RS26530 () | 73366..74886 | - | 1521 | Protein_92 | DUF4158 domain-containing protein | - |
| CJV63_RS26535 () | 75016..75645 | - | 630 | WP_001717585.1 | hypothetical protein | - |
| CJV63_RS26540 () | 75699..76368 | - | 670 | Protein_94 | AAA family ATPase | - |
| CJV63_RS26545 () | 76638..76760 | + | 123 | Protein_95 | IS1 family transposase IS1N | Transposase |
| CJV63_RS26550 () | 77040..77600 | + | 561 | WP_001595151.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| CJV63_RS26555 () | 77603..80572 | + | 2970 | WP_001717584.1 | Tn3 family transposase TnpA_TnShfr1 | Transposase |
| CJV63_RS26565 () | 80786..81082 | + | 297 | WP_000766063.1 | hypothetical protein | - |
| CJV63_RS26570 () | 81082..82259 | + | 1178 | Protein_99 | IS91 family transposase ISEc37 | Transposase |
| CJV63_RS26575 () | 82448..83010 | + | 563 | Protein_100 | IS1 family transposase | - |
| CJV63_RS26580 () | 83024..85459 | - | 2436 | WP_157757767.1 | CS6 fimbrial usher CssD | - |
| CJV63_RS26585 () | 85416..86114 | - | 699 | WP_001595139.1 | Chaperone protein caf1M | VF |
| CJV63_RS26590 () | 86163..86666 | - | 504 | WP_001595140.1 | CS6 fimbrial subunit CssB | - |
| CJV63_RS26595 () | 86684..87148 | - | 465 | WP_024171410.1 | CS6 fimbrial subunit A | VF |
| CJV63_RS26600 () | 87303..87527 | - | 225 | Protein_105 | IS66 family transposase ISEc43 | Transposase |
| CJV63_RS27310 () | 87746..87919 | - | 174 | WP_001717498.1 | hypothetical protein | - |
| CJV63_RS26610 () | 88287..89002 | - | 716 | Protein_107 | IS91 family transposase ISEc37 | Transposase |
| CJV63_RS26615 () | 89045..89317 | - | 273 | WP_000566440.1 | hypothetical protein | - |
| CJV63_RS26620 () | 89310..89888 | - | 579 | WP_001400936.1 | Tn3 family transposase ISPsy39 | Transposase |
| CJV63_RS26625 () | 90038..93085 | + | 3048 | WP_001717496.1 | Tn3 family transposase ISPsy42 | Transposase |
| CJV63_RS27315 () | 93094..93258 | - | 165 | Protein_111 | IS91 family transposase | - |
| CJV63_RS27320 () | 93251..93463 | + | 213 | WP_148717951.1 | hypothetical protein | - |
| CJV63_RS26635 () | 93874..95061 | + | 1188 | WP_024191434.1 | peptide antibiotic transporter SbmA | - |
| CJV63_RS26640 () | 95359..96447 | - | 1089 | Protein_114 | IS3 family transposase | - |
| CJV63_RS26645 () | 96628..97254 | - | 627 | WP_001595210.1 | ABC transporter ATP-binding protein | - |
| CJV63_RS26650 () | 97247..98020 | - | 774 | WP_050437394.1 | hypothetical protein | - |
| CJV63_RS26655 () | 97977..99179 | - | 1203 | WP_001595205.1 | TolC family protein | - |
| CJV63_RS26660 () | 99176..100306 | - | 1131 | WP_001718764.1 | ABC transporter permease | - |
| CJV63_RS26665 () | 100865..101511 | - | 647 | Protein_119 | IS630 family transposase | - |
| CJV63_RS26670 () | 101512..101913 | + | 402 | Protein_120 | IS91 family transposase | - |
| CJV63_RS26685 () | 102776..103633 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| CJV63_RS26690 () | 103626..103700 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CJV63_RS26700 () | 103926..104186 | - | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
| CJV63_RS26705 () | 104470..104676 | - | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 104668..104724 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 104668..104724 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 104668..104724 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 104668..104724 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| CJV63_RS26715 () | 104968..105150 | + | 183 | WP_001393357.1 | hypothetical protein | - |
| CJV63_RS26720 () | 105374..106105 | - | 732 | WP_001717613.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CJV63_RS26725 () | 106102..106648 | - | 547 | Protein_127 | DUF2726 domain-containing protein | - |
| CJV63_RS26730 () | 106666..109503 | - | 2838 | Protein_128 | Multifunctional conjugation protein TraI | Relaxase |
| CJV63_RS26735 () | 109565..109825 | + | 261 | Protein_129 | IS3 family transposase ISSfl10 | Transposase |
| CJV63_RS26740 () | 109890..111041 | + | 1152 | WP_001702847.1 | IS30 family transposase IS30D | Transposase |
| CJV63_RS27505 () | 111122..111277 | + | 156 | WP_000074142.1 | hypothetical protein | - |
| CJV63_RS26750 () | 111525..113117 | - | 1593 | WP_099490891.1 | IS66 family transposase ISEc23 | Transposase |
| CJV63_RS26755 () | 113148..113498 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| CJV63_RS26760 () | 113495..113920 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CJV63_RS26765 () | 114006..114302 | + | 297 | Protein_135 | IS21 family transposase | - |
| CJV63_RS26775 () | 114412..114828 | - | 417 | Protein_136 | IS66 family transposase ISCro1 | Transposase |
| CJV63_RS26785 () | 115122..115340 | - | 219 | WP_001595189.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| CJV63_RS26790 () | 115848..115997 | + | 150 | Protein_138 | IS3 family transposase ISKpn37 | Transposase |
| CJV63_RS26795 () | 116121..116623 | + | 503 | Protein_139 | IS3 family transposase ISBope1 | Transposase |
| CJV63_RS26800 () | 116683..117138 | + | 456 | WP_157757766.1 | IS3 family transposase ISEcB1 | Transposase |
| CJV63_RS26805 () | 117153..117587 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| CJV63_RS26810 () | 117584..117934 | + | 351 | WP_024171399.1 | IS66 family transposase ISEc47 | Transposase |
| CJV63_RS26815 () | 117965..118579 | + | 615 | Protein_143 | IS66 family transposase ISEc47 | Transposase |
| CJV63_RS26820 () | 118750..119862 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CJV63_RS26825 () | 119917..120927 | + | 1011 | Protein_145 | IS66 family transposase ISEc43 | Transposase |
| CJV63_RS26830 () | 121125..121550 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CJV63_RS26835 () | 121547..121897 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| CJV63_RS26840 () | 121928..123520 | + | 1593 | WP_099490891.1 | IS66 family transposase ISEc23 | Transposase |
| CJV63_RS26845 () | 123550..124312 | - | 763 | Protein_149 | IS21 family transposase ISSso4 | Transposase |
| CJV63_RS26850 () | 124497..125065 | - | 569 | Protein_150 | IS91 family transposase IS91 | Transposase |
| CJV63_RS26855 () | 125065..125361 | - | 297 | WP_001717536.1 | hypothetical protein | - |
| CJV63_RS26870 () | 125855..126211 | + | 357 | WP_099490940.1 | Protein CexE | VF |
| CJV63_RS26880 () | 126485..127383 | + | 899 | Protein_153 | IS3 family transposase ISEc48 | Transposase |
| CJV63_RS27510 () | 127385..128750 | + | 1366 | Protein_154 | IS66 family transposase ISCro1 | Transposase |
| CJV63_RS26890 () | 128892..129557 | - | 666 | Protein_155 | IS66 family transposase ISEc43 | Transposase |
| CJV63_RS26895 () | 129469..129699 | - | 231 | WP_099490941.1 | IS66 family transposase ISEc43 | Transposase |
| CJV63_RS26900 () | 129788..129985 | - | 198 | Protein_157 | IS3 family transposase IS2 | Transposase |
| CJV63_RS26905 () | 130237..130878 | + | 642 | WP_001719375.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CJV63_RS26910 () | 130928..131067 | + | 140 | Protein_159 | IS91 family transposase | - |
| CJV63_RS27515 () | 131263..131412 | - | 150 | WP_001424616.1 | hypothetical protein | - |
| CJV63_RS26915 () | 131782..133026 | - | 1245 | WP_024171601.1 | hypothetical protein | - |
| CJV63_RS26920 () | 133234..133726 | + | 493 | Protein_162 | IS3 family transposase IS1203 | Transposase |
| - () | 133825..133971 | - | 147 | NuclAT_0 | - | - |
| - () | 133825..133971 | - | 147 | NuclAT_0 | - | - |
| - () | 133825..133971 | - | 147 | NuclAT_0 | - | - |
| - () | 133825..133971 | - | 147 | NuclAT_0 | - | - |
| CJV63_RS26925 () | 133928..134242 | - | 315 | WP_000872086.1 | hypothetical protein | - |
| CJV63_RS26930 () | 134239..134913 | - | 675 | WP_001719371.1 | plasmid SOS inhibition protein A | - |
| CJV63_RS26935 () | 134910..135344 | - | 435 | WP_001719370.1 | conjugation system SOS inhibitor PsiB | - |
| CJV63_RS26940 () | 135399..137366 | - | 1968 | WP_099490942.1 | ParB/RepB/Spo0J family partition protein | - |
| CJV63_RS26945 () | 137427..137660 | - | 234 | WP_001297827.1 | DUF905 domain-containing protein | - |
| CJV63_RS26950 () | 137717..138238 | - | 522 | WP_032201449.1 | single-stranded DNA-binding protein | - |
| CJV63_RS26970 () | 139085..139648 | - | 564 | WP_032201448.1 | class I SAM-dependent methyltransferase | - |
| CJV63_RS26975 () | 139694..141055 | - | 1362 | WP_032201446.1 | DUF3560 domain-containing protein | - |
| CJV63_RS26980 () | 141107..141337 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| CJV63_RS27520 () | 142017..142249 | + | 233 | Protein_172 | hypothetical protein | - |
| CJV63_RS26995 () | 142236..142412 | - | 177 | Protein_173 | antirestriction protein | - |
| CJV63_RS27000 () | 142508..142933 | + | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| CJV63_RS27005 () | 142930..143280 | + | 351 | WP_001404526.1 | IS66 family transposase ISEc47 | Transposase |
| CJV63_RS27010 () | 143311..144924 | + | 1614 | WP_099490935.1 | IS66 family transposase ISEc23 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|