MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85864 bp
Accession: NZ_CP024226 Location: 1..85864 Organism: Escherichia coli O169:H41 strain 2014EL-1345-2 Replicon: plasmid unnamed3
Accession: NZ_CP024226 Location: 1..85864 Organism: Escherichia coli O169:H41 strain 2014EL-1345-2 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJV63_RS25490 () | 1..215 | - | 215 | Protein_0 | hypothetical protein | - |
| CJV63_RS25495 () | 274..507 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| CJV63_RS25500 () | 565..1092 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| CJV63_RS25510 () | 1476..1790 | - | 315 | WP_005112260.1 | hypothetical protein | - |
| CJV63_RS25515 () | 1861..2052 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| CJV63_RS25520 () | 2049..2471 | - | 423 | WP_086200713.1 | DUF1380 family protein | - |
| CJV63_RS25525 () | 2518..2820 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| CJV63_RS27470 () | 3356..4132 | - | 777 | WP_001005022.1 | hypothetical protein | - |
| CJV63_RS25540 () | 4178..4612 | - | 435 | WP_000274412.1 | DUF1380 family protein | - |
| CJV63_RS25545 () | 4626..4847 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| CJV63_RS25550 () | 4848..5531 | - | 684 | WP_000086153.1 | DNA methylase | - |
| CJV63_RS25555 () | 5608..5919 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| CJV63_RS25560 () | 5916..6818 | - | 903 | WP_023383827.1 | DUF1281 domain-containing protein | - |
| CJV63_RS25575 () | 7237..7485 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CJV63_RS25580 () | 7482..7919 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CJV63_RS25585 () | 7919..9190 | + | 1272 | WP_000457515.1 | Y-family DNA polymerase | - |
| CJV63_RS25590 () | 9394..10020 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CJV63_RS27475 () | 10017..10319 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| CJV63_RS25600 () | 10540..10707 | - | 168 | Protein_18 | serine hydrolase | - |
| CJV63_RS25605 () | 10856..11731 | + | 876 | WP_000239590.1 | Group II intron-encoded protein LtrA | ARG |
| CJV63_RS25610 () | 11778..12110 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CJV63_RS25615 () | 12124..14919 | + | 2796 | Protein_21 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CJV63_RS25620 () | 14962..15977 | - | 1016 | Protein_22 | IS3 family transposase ISEc36 | Transposase |
| CJV63_RS25625 () | 16372..17028 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| CJV63_RS25630 () | 17347..17775 | - | 429 | Protein_24 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| CJV63_RS25635 () | 17808..19199 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| CJV63_RS25640 () | 19236..19808 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| CJV63_RS25645 () | 19945..20535 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| CJV63_RS25650 () | 20649..21080 | - | 432 | Protein_28 | IS6-like element IS26 family transposase | - |
| CJV63_RS25655 () | 21176..22177 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| CJV63_RS25660 () | 22353..22697 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| CJV63_RS25670 () | 23283..23987 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CJV63_RS25680 () | 24180..24527 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| CJV63_RS25685 () | 24545..26425 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| CJV63_RS25690 () | 26704..28050 | - | 1347 | WP_001132032.1 | hypothetical protein | - |
| CJV63_RS25700 () | 28404..29006 | + | 603 | WP_000517695.1 | hypothetical protein | - |
| CJV63_RS25705 () | 29062..29556 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| CJV63_RS27480 () | 29556..29822 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| CJV63_RS25720 () | 30299..30772 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| CJV63_RS25725 () | 30889..31737 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| CJV63_RS25730 () | 31777..32058 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CJV63_RS25735 () | 32055..32324 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| CJV63_RS27485 () | 32379..32537 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| CJV63_RS25750 () | 33234..34265 | - | 1032 | WP_000907882.1 | replication initiation protein | - |
| CJV63_RS25765 () | 34968..35609 | + | 642 | WP_000335851.1 | transcription termination factor NusG | - |
| CJV63_RS25770 () | 35750..36415 | + | 666 | WP_000154140.1 | hypothetical protein | - |
| CJV63_RS25780 () | 36686..36916 | + | 231 | WP_071596634.1 | PilI type IV pilus biogenesis protein | - |
| CJV63_RS25785 () | 37032..37367 | + | 336 | WP_024168261.1 | hypothetical protein | - |
| CJV63_RS25790 () | 37594..38664 | + | 1071 | WP_000730432.1 | hypothetical protein | VF |
| CJV63_RS25795 () | 38668..39105 | + | 438 | WP_000539951.1 | hypothetical protein | VF |
| CJV63_RS25800 () | 39137..40756 | + | 1620 | WP_001035559.1 | Outer membrane lipoprotein BfpB | VF |
| CJV63_RS25805 () | 40777..42072 | + | 1296 | WP_000129884.1 | type 4b pilus protein PilO2 | - |
| CJV63_RS25810 () | 42062..42520 | + | 459 | WP_000095887.1 | hypothetical protein | VF |
| CJV63_RS25815 () | 42623..44131 | + | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CJV63_RS25820 () | 44133..45227 | + | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CJV63_RS25825 () | 45289..45825 | + | 537 | WP_000111522.1 | hypothetical protein | VF |
| CJV63_RS25830 () | 45870..46355 | + | 486 | WP_001080767.1 | hypothetical protein | VF |
| CJV63_RS25835 () | 46371..46996 | + | 626 | Protein_57 | prepilin peptidase | - |
| CJV63_RS25840 () | 47014..48207 | + | 1194 | WP_086200649.1 | hypothetical protein | VF |
| CJV63_RS25845 () | 48264..48527 | - | 264 | Protein_59 | transposase | - |
| CJV63_RS25850 () | 48465..48617 | + | 153 | WP_001399803.1 | hypothetical protein | - |
| CJV63_RS25855 () | 48768..49592 | + | 825 | WP_001238934.1 | hypothetical protein | - |
| CJV63_RS25860 () | 49678..50880 | + | 1203 | WP_000976355.1 | conjugal transfer protein TraF | - |
| CJV63_RS25865 () | 50940..51524 | + | 585 | WP_086200648.1 | histidine phosphatase family protein | - |
| CJV63_RS25870 () | 51919..52376 | + | 458 | Protein_64 | hypothetical protein | VF |
| CJV63_RS25875 () | 52373..53191 | + | 819 | WP_000646093.1 | hypothetical protein | VF |
| CJV63_RS25880 () | 53188..54336 | + | 1149 | WP_001024968.1 | putative protein YggR | VF |
| CJV63_RS25885 () | 54333..54623 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| CJV63_RS25890 () | 54638..55189 | + | 552 | WP_000014585.1 | Phospholipase D | VF |
| CJV63_RS25895 () | 55278..59044 | + | 3767 | Protein_69 | DNA primase | - |
| CJV63_RS25900 () | 59062..59409 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CJV63_RS25905 () | 59406..60098 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CJV63_RS25910 () | 60109..61092 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| CJV63_RS25915 () | 61095..62384 | + | 1290 | WP_001271993.1 | conjugal transfer protein TraO | - |
| CJV63_RS25920 () | 62384..63088 | + | 705 | WP_001295718.1 | IncI1-type conjugal transfer protein TraP | - |
| CJV63_RS25925 () | 63088..63615 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CJV63_RS25930 () | 63666..64069 | + | 404 | Protein_76 | IncI1-type conjugal transfer protein TraR | - |
| CJV63_RS25935 () | 64133..64321 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CJV63_RS25940 () | 64305..65105 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CJV63_RS25945 () | 65195..68239 | + | 3045 | WP_001024771.1 | IncI1-type conjugal transfer protein TraU | - |
| CJV63_RS25950 () | 68239..68853 | + | 615 | WP_032174792.1 | IncI1-type conjugal transfer protein TraV | - |
| CJV63_RS25955 () | 68820..70022 | + | 1203 | WP_001189157.1 | IncI1-type conjugal transfer protein TraW | - |
| CJV63_RS25960 () | 70051..70635 | + | 585 | WP_001037992.1 | IncI1-type conjugal transfer protein TraX | - |
| CJV63_RS25965 () | 70732..72900 | + | 2169 | WP_000698356.1 | DotA/TraY family protein | - |
| CJV63_RS25970 () | 72971..73633 | + | 663 | WP_000644795.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CJV63_RS25975 () | 73705..73914 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CJV63_RS27490 () | 74316..74492 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| CJV63_RS25980 () | 74557..74853 | - | 297 | WP_001275298.1 | hypothetical protein | - |
| CJV63_RS25985 () | 75153..75404 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| CJV63_RS25990 () | 75476..75628 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 75678..75740 | + | 63 | NuclAT_0 | - | - |
| - () | 75678..75740 | + | 63 | NuclAT_0 | - | - |
| - () | 75678..75740 | + | 63 | NuclAT_0 | - | - |
| - () | 75678..75740 | + | 63 | NuclAT_0 | - | - |
| CJV63_RS25995 () | 75943..77034 | + | 1092 | WP_001756226.1 | hypothetical protein | - |
| - () | 77104..77162 | + | 59 | NuclAT_1 | - | - |
| - () | 77104..77162 | + | 59 | NuclAT_1 | - | - |
| - () | 77104..77162 | + | 59 | NuclAT_1 | - | - |
| - () | 77104..77162 | + | 59 | NuclAT_1 | - | - |
| CJV63_RS26000 () | 77342..78550 | + | 1209 | WP_001295719.1 | IncI1-type conjugal transfer protein TrbA | - |
| CJV63_RS26005 () | 78569..79639 | + | 1071 | WP_000151590.1 | IncI1-type conjugal transfer protein TrbB | - |
| CJV63_RS26010 () | 79632..81922 | + | 2291 | Protein_93 | conjugal transfer protein TrbC | - |
| CJV63_RS26015 () | 81994..82812 | - | 819 | WP_000106194.1 | DUF2971 domain-containing protein | - |
| CJV63_RS26020 () | 82934..85636 | - | 2703 | WP_024190603.1 | Protein TraI | Relaxase |
| CJV63_RS26025 () | 85647..85864 | - | 218 | Protein_96 | IncI1-type relaxosome accessory protein NikA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|