MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP024158 Location: 17996..29750 Organism: Escherichia coli strain 14EC047 Replicon: plasmid p14EC047c
Accession: NZ_CP024158 Location: 17996..29750 Organism: Escherichia coli strain 14EC047 Replicon: plasmid p14EC047c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR540_RS26575 (CR540_27955) | 13220..14497 | + | 1278 | WP_225877510.1 | type II secretion system protein GspL | - |
| CR540_RS26580 (CR540_27960) | 14484..14999 | + | 516 | WP_000998852.1 | type II secretion system protein M | - |
| CR540_RS26585 (CR540_27965) | 15168..15883 | + | 716 | Protein_14 | A24 family peptidase | - |
| CR540_RS26590 (CR540_27970) | 15977..16378 | + | 402 | WP_001222320.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| CR540_RS26595 | 16504..16668 | + | 165 | Protein_16 | IS3 family transposase | - |
| CR540_RS27965 (CR540_27975) | 16622..16846 | - | 225 | WP_001368889.1 | transposase | - |
| CR540_RS26605 (CR540_27980) | 16967..17260 | + | 294 | Protein_18 | hypothetical protein | - |
| CR540_RS26610 (CR540_27985) | 17489..17742 | + | 254 | Protein_19 | replication regulatory protein RepA | - |
| CR540_RS27970 | 17765..17872 | + | 108 | Protein_20 | incFII family plasmid replication initiator RepA | - |
| CR540_RS26640 (CR540_28010) | 20140..20391 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CR540_RS26645 (CR540_28015) | 20388..20675 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR540_RS26655 (CR540_28025) | 22791..26693 | + | 3903 | WP_134895005.1 | Serine protease EspP | VF |
| CR540_RS26660 (CR540_28030) | 26928..28466 | - | 1539 | WP_000099202.1 | IS66 family transposase ISEc22 | Transposase |
| CR540_RS26665 (CR540_28035) | 28515..28862 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| CR540_RS26670 (CR540_28040) | 28984..29262 | - | 279 | WP_001341328.1 | IS66 family transposase ISEc22 | Transposase |
| CR540_RS26675 (CR540_28050) | 29463..29723 | + | 261 | Protein_29 | IS3 family transposase ISEc31 | Transposase |
| CR540_RS26680 (CR540_28060) | 29779..30476 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| CR540_RS26685 (CR540_28065) | 30501..31522 | - | 1022 | Protein_31 | DNA helicase UvrD | - |
| CR540_RS26690 (CR540_28070) | 31507..33071 | - | 1565 | Protein_32 | AAA family ATPase | - |
| CR540_RS26695 (CR540_28075) | 33146..33562 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CR540_RS26700 (CR540_28080) | 33559..33789 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| CR540_RS26710 (CR540_28085) | 34393..34743 | + | 351 | WP_000493379.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|