MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 106324 bp
Accession: NZ_CP024158 Location: 1..106324 Organism: Escherichia coli strain 14EC047 Replicon: plasmid p14EC047c
Accession: NZ_CP024158 Location: 1..106324 Organism: Escherichia coli strain 14EC047 Replicon: plasmid p14EC047c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR540_RS26520 | 1094..1579 | + | 486 | Protein_1 | IS3 family transposase IS3 | Transposase |
| CR540_RS26525 (CR540_27905) | 2038..4695 | + | 2658 | Protein_2 | M66 family metalloprotease | - |
| CR540_RS26530 (CR540_27910) | 4779..5654 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| CR540_RS26535 (CR540_27915) | 5655..7624 | + | 1970 | Protein_4 | Type II secretion system protein D | VF |
| CR540_RS26540 (CR540_27920) | 7621..9122 | + | 1502 | Protein_5 | Type II secretion system protein E | VF |
| CR540_RS26545 (CR540_27925) | 9124..10347 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| CR540_RS26550 (CR540_27930) | 10378..10811 | + | 434 | Protein_7 | Type II secretion system protein G | VF |
| CR540_RS26555 (CR540_27935) | 10808..11358 | + | 551 | Protein_8 | type II secretion system minor pseudopilin GspH | - |
| CR540_RS26560 (CR540_27940) | 11373..11720 | + | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| CR540_RS26565 (CR540_27945) | 11717..12314 | + | 598 | Protein_10 | type II secretion system minor pseudopilin GspJ | - |
| CR540_RS26570 (CR540_27950) | 12311..13286 | + | 976 | Protein_11 | Putative type II secretion system protein K | VF |
| CR540_RS26575 (CR540_27955) | 13220..14497 | + | 1278 | WP_225877510.1 | Type II secretion system protein L | VF |
| CR540_RS26580 (CR540_27960) | 14484..14999 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| CR540_RS26585 (CR540_27965) | 15168..15883 | + | 716 | Protein_14 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CR540_RS26590 (CR540_27970) | 15977..16378 | + | 402 | WP_001222320.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| CR540_RS26595 | 16504..16668 | + | 165 | Protein_16 | IS3 family transposase IS1203 | Transposase |
| CR540_RS27965 (CR540_27975) | 16622..16846 | - | 225 | WP_001368889.1 | transposase | - |
| CR540_RS26605 (CR540_27980) | 16967..17260 | + | 294 | Protein_18 | hypothetical protein | - |
| CR540_RS26610 (CR540_27985) | 17489..17742 | + | 254 | Protein_19 | replication regulatory protein RepA | - |
| CR540_RS27970 | 17765..17872 | + | 108 | Protein_20 | incFII family plasmid replication initiator RepA | - |
| CR540_RS26640 (CR540_28010) | 20140..20391 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CR540_RS26645 (CR540_28015) | 20388..20675 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR540_RS26655 (CR540_28025) | 22791..26693 | + | 3903 | WP_134895005.1 | Serine protease EspP | VF |
| CR540_RS26660 (CR540_28030) | 26928..28466 | - | 1539 | WP_000099202.1 | IS66 family transposase ISEc22 | Transposase |
| CR540_RS26665 (CR540_28035) | 28515..28862 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| CR540_RS26670 (CR540_28040) | 28984..29262 | - | 279 | WP_001341328.1 | IS66 family transposase ISEc22 | Transposase |
| CR540_RS26675 (CR540_28050) | 29463..29723 | + | 261 | Protein_29 | IS3 family transposase ISEc31 | Transposase |
| CR540_RS26680 (CR540_28060) | 29779..30476 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| CR540_RS26685 (CR540_28065) | 30501..31522 | - | 1022 | Protein_31 | DNA helicase UvrD | - |
| CR540_RS26690 (CR540_28070) | 31507..33071 | - | 1565 | Protein_32 | AAA family ATPase | - |
| CR540_RS26695 (CR540_28075) | 33146..33562 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CR540_RS26700 (CR540_28080) | 33559..33789 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| CR540_RS26710 (CR540_28085) | 34393..34743 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| CR540_RS26715 (CR540_28090) | 34787..35476 | + | 690 | WP_089583722.1 | hypothetical protein | - |
| CR540_RS26720 (CR540_28095) | 35473..36264 | + | 792 | WP_000016493.1 | site-specific integrase | - |
| CR540_RS26725 (CR540_28100) | 36442..36795 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| CR540_RS26730 (CR540_28105) | 36845..37660 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| CR540_RS26740 (CR540_28115) | 37904..38431 | + | 528 | WP_000203272.1 | colicin B immunity protein | - |
| CR540_RS26745 (CR540_28120) | 38449..38616 | - | 168 | Protein_41 | colicin-B | - |
| CR540_RS26750 (CR540_28130) | 38789..38992 | + | 204 | Protein_42 | hypothetical protein | - |
| CR540_RS26755 (CR540_28135) | 39616..40727 | - | 1112 | Protein_43 | IS4 family transposase IS186B | Transposase |
| CR540_RS26760 | 40883..41119 | + | 237 | WP_014640552.1 | colicin V immunity protein | - |
| CR540_RS26765 (CR540_28145) | 41097..41408 | + | 312 | WP_001259758.1 | colicin V | - |
| CR540_RS26770 (CR540_28150) | 41578..43673 | - | 2096 | Protein_46 | Toxin RTX-I translocation ATP-binding protein | VF |
| CR540_RS26775 (CR540_28155) | 43666..44469 | - | 804 | Protein_47 | HlyD family secretion protein | - |
| CR540_RS26780 (CR540_28160) | 44568..45728 | + | 1161 | Protein_48 | IS3 family transposase IS1203 | Transposase |
| CR540_RS26800 (CR540_28180) | 46609..46829 | + | 221 | Protein_50 | integrase core domain-containing protein | - |
| CR540_RS26810 (CR540_28190) | 47588..47977 | - | 390 | WP_001332050.1 | IS110 family transposase ISEc20 | Transposase |
| CR540_RS26815 (CR540_28195) | 48081..49033 | + | 953 | Protein_52 | Protease 7 | VF |
| CR540_RS26825 (CR540_28205) | 49466..50575 | + | 1110 | WP_096896842.1 | SDR family oxidoreductase | - |
| CR540_RS26830 (CR540_28210) | 50644..51546 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| CR540_RS26835 (CR540_28215) | 51920..52108 | + | 189 | WP_134895006.1 | serine/threonine protein kinase | - |
| CR540_RS26840 (CR540_28220) | 52229..52969 | + | 741 | WP_096094376.1 | tyrosine-type recombinase/integrase | - |
| CR540_RS26845 (CR540_28225) | 53254..54231 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| CR540_RS26855 (CR540_28235) | 54974..55297 | + | 324 | Protein_58 | IS21 family transposase IS21 | Transposase |
| CR540_RS26860 (CR540_28240) | 55299..55403 | + | 105 | Protein_59 | AAA family ATPase | - |
| CR540_RS26865 (CR540_28245) | 55464..55976 | + | 513 | Protein_60 | DUF4113 domain-containing protein | - |
| CR540_RS26880 (CR540_28265) | 57209..58121 | + | 913 | Protein_62 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| CR540_RS26885 (CR540_28270) | 58121..58948 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| CR540_RS26890 (CR540_28275) | 58945..59801 | + | 857 | Protein_64 | Manganese transport system membrane protein MntB | ARG |
| CR540_RS26895 (CR540_28280) | 59798..60655 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| CR540_RS26900 (CR540_28285) | 60888..61145 | - | 258 | Protein_66 | Tn3 family transposase | - |
| CR540_RS26905 (CR540_28290) | 61143..61274 | + | 132 | Protein_67 | phosphopyruvate hydratase | - |
| CR540_RS26910 (CR540_28295) | 61247..61498 | - | 252 | WP_000163248.1 | hypothetical protein | - |
| CR540_RS26920 (CR540_28305) | 61938..62417 | - | 480 | WP_000190053.1 | hypothetical protein | - |
| CR540_RS26925 (CR540_28310) | 62559..62984 | + | 426 | WP_012300440.1 | hypothetical protein | - |
| CR540_RS26930 (CR540_28315) | 63609..65111 | + | 1503 | WP_000715078.1 | hypothetical protein | - |
| CR540_RS26935 (CR540_28325) | 65267..65964 | + | 698 | WP_223369285.1 | IS1-like element IS1A family transposase | - |
| CR540_RS26940 (CR540_28330) | 66262..67428 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| CR540_RS26945 (CR540_28335) | 67428..68399 | + | 972 | WP_134895008.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CR540_RS26955 (CR540_28345) | 68663..69876 | + | 1214 | WP_167586639.1 | IS3 family transposase IS629 | Transposase |
| CR540_RS26960 (CR540_28350) | 70392..70561 | + | 170 | Protein_76 | hypothetical protein | - |
| CR540_RS27975 | 70558..70905 | + | 348 | WP_001350917.1 | hypothetical protein | - |
| CR540_RS27980 | 71114..71308 | + | 195 | WP_249929354.1 | hypothetical protein | - |
| CR540_RS26975 (CR540_28370) | 71359..72056 | + | 698 | WP_236917611.1 | IS1-like element IS1A family transposase | - |
| CR540_RS26985 (CR540_28380) | 72499..73230 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| CR540_RS26990 (CR540_28385) | 73484..75734 | + | 2251 | Protein_81 | type IV conjugative transfer system coupling protein TraD | - |
| CR540_RS26995 (CR540_28390) | 75734..81005 | + | 5272 | Protein_82 | Multifunctional conjugation protein TraI | Relaxase |
| CR540_RS27000 (CR540_28395) | 81025..81771 | + | 747 | WP_000205711.1 | Multifunctional conjugation protein TraI | Relaxase |
| CR540_RS27005 (CR540_28400) | 81830..82686 | + | 857 | Protein_84 | putative protein YcjY | VF |
| CR540_RS27010 (CR540_28405) | 82801..83362 | + | 562 | Protein_85 | fertility inhibition protein FinO | - |
| CR540_RS27015 (CR540_28410) | 83491..83892 | + | 402 | WP_000536902.1 | IS66 family transposase ISEc8 | Transposase |
| CR540_RS27020 (CR540_28415) | 83889..84236 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CR540_RS27025 (CR540_28420) | 84286..85353 | + | 1068 | Protein_88 | IS66 family transposase ISEc8 | Transposase |
| CR540_RS27030 (CR540_28425) | 85440..85865 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CR540_RS27035 (CR540_28430) | 85862..86212 | + | 351 | WP_101979831.1 | IS66 family transposase ISEc23 | Transposase |
| CR540_RS27040 (CR540_28435) | 86243..87855 | + | 1613 | Protein_91 | IS66 family transposase ISEc23 | Transposase |
| CR540_RS27045 (CR540_28440) | 87887..88363 | + | 477 | Protein_92 | IS66 family transposase ISEc8 | Transposase |
| CR540_RS27050 (CR540_28445) | 88426..88563 | - | 138 | Protein_93 | IS3 family transposase | - |
| CR540_RS27055 (CR540_28450) | 88667..89665 | - | 999 | WP_077629919.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CR540_RS27060 (CR540_28455) | 89739..91461 | - | 1723 | Protein_95 | phosphoethanolamine transferase CptA | - |
| CR540_RS27985 | 91555..92658 | - | 1104 | Protein_96 | glycosyltransferase family 4 protein | - |
| CR540_RS27070 (CR540_28470) | 92658..93479 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| CR540_RS27390 | 93664..93978 | + | 315 | WP_167586643.1 | hypothetical protein | - |
| CR540_RS27080 (CR540_28475) | 94950..96162 | + | 1213 | Protein_99 | IS3 family transposase IS629 | Transposase |
| CR540_RS27090 (CR540_28485) | 96717..97000 | - | 284 | Protein_100 | YkgJ family cysteine cluster protein | - |
| CR540_RS27095 (CR540_28490) | 97149..98474 | - | 1326 | WP_024227774.1 | hypothetical protein | VF |
| CR540_RS27100 (CR540_28500) | 99167..99826 | - | 660 | Protein_102 | tyrosine-type recombinase/integrase | - |
| CR540_RS27105 (CR540_28505) | 99963..100706 | - | 744 | Protein_103 | IS21 family transposase IS100kyp | Transposase |
| CR540_RS27990 | 100747..101256 | - | 510 | WP_249929357.1 | DUF4158 domain-containing protein | - |
| CR540_RS27995 | 101187..101498 | - | 312 | WP_249929355.1 | Tn3 family transposase TnpA_ISAzs29 | Transposase |
| CR540_RS28000 | 101661..101960 | - | 300 | WP_249929356.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| CR540_RS27125 (CR540_28525) | 103350..103670 | - | 321 | WP_000796978.1 | cytochrome b562 | - |
| CR540_RS27130 (CR540_28530) | 103782..105991 | - | 2210 | Protein_109 | Catalase-peroxidase | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|