MGE detailed information
MGE type: IScluster/Tn MGE length: 22873 bp
Accession: NZ_CP024151 Location: 15566..38438 Organism: Escherichia coli strain 14EC033 Replicon: plasmid p14EC033d
Accession: NZ_CP024151 Location: 15566..38438 Organism: Escherichia coli strain 14EC033 Replicon: plasmid p14EC033d
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR539_RS25480 () | 11275..12015 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| CR539_RS25485 () | 12136..12396 | - | 261 | Protein_13 | hypothetical protein | - |
| CR539_RS25490 () | 12772..14271 | - | 1500 | WP_063073405.1 | alpha/beta hydrolase | - |
| CR539_RS25495 () | 14364..15313 | - | 950 | Protein_15 | omptin family outer membrane protease OmpP | - |
| CR539_RS25500 () | 15566..16546 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| CR539_RS25510 () | 18367..22482 | + | 4116 | WP_063073392.1 | Outer membrane protein IcsA autotransporter | VF |
| CR539_RS25515 () | 22584..23564 | + | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| CR539_RS25520 () | 23830..24400 | - | 571 | Protein_20 | IS3 family transposase | - |
| CR539_RS25525 () | 24453..24953 | + | 501 | Protein_21 | IS21 family transposase IS100kyp | Transposase |
| CR539_RS25530 () | 24950..25645 | + | 696 | WP_074440817.1 | IS21 family transposase IS100kyp | Transposase |
| CR539_RS25540 () | 25864..26670 | - | 807 | WP_020219156.1 | site-specific integrase | - |
| CR539_RS25545 () | 26671..26976 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CR539_RS25550 () | 26978..27196 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CR539_RS25565 () | 28012..28302 | - | 291 | WP_032248853.1 | hypothetical protein | - |
| CR539_RS25575 () | 28601..29290 | - | 690 | Protein_27 | IS3 family transposase ISEhe3 | Transposase |
| CR539_RS25580 () | 29325..30059 | - | 735 | Protein_28 | IS66 family transposase ISEc8 | Transposase |
| CR539_RS25585 () | 30123..31237 | + | 1115 | WP_085947756.1 | IS3 family transposase IS3 | Transposase |
| CR539_RS25590 () | 31428..32125 | - | 698 | Protein_30 | IS1 family transposase IS1G | Transposase |
| CR539_RS25600 () | 32384..32641 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| CR539_RS25605 () | 32710..34407 | - | 1698 | WP_000401034.1 | sulfatase | - |
| CR539_RS25610 () | 34503..35639 | - | 1137 | WP_033804283.1 | Outer membrane porin protein OmpD | VF |
| CR539_RS25620 () | 36193..37421 | + | 1229 | WP_167654659.1 | IS3 family transposase IS2 | Transposase |
| CR539_RS25625 () | 37490..37802 | + | 313 | Protein_35 | IS66 family insertion sequence element accessory protein TnpB | - |
| CR539_RS25630 () | 37950..38438 | + | 489 | Protein_36 | IS91 family transposase ISSbo1 | Transposase |
| CR539_RS25635 () | 38705..38980 | - | 276 | WP_063073486.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR539_RS25640 () | 38980..39264 | - | 285 | WP_062894229.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CR539_RS25650 () | 40175..41032 | - | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| CR539_RS25655 () | 41025..41507 | - | 483 | WP_074149688.1 | hypothetical protein | - |
| CR539_RS25660 () | 41500..41574 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| CR539_RS25670 () | 41806..42063 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| CR539_RS25675 () | 42326..42529 | - | 204 | Protein_43 | Hok/Gef family protein | - |
| - () | 42516..42577 | + | 62 | NuclAT_1 | - | - |
| - () | 42516..42577 | + | 62 | NuclAT_1 | - | - |
| - () | 42516..42577 | + | 62 | NuclAT_1 | - | - |
| - () | 42516..42577 | + | 62 | NuclAT_1 | - | - |
| CR539_RS25685 () | 43160..43372 | - | 213 | WP_032084501.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|