MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108710 bp
Accession: NZ_CP024150 Location: 1..108710 Organism: Escherichia coli strain 14EC033 Replicon: plasmid p14EC033c
Accession: NZ_CP024150 Location: 1..108710 Organism: Escherichia coli strain 14EC033 Replicon: plasmid p14EC033c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR539_RS24735 () | 90..332 | + | 243 | WP_021542659.1 | hypothetical protein | - |
| CR539_RS24745 () | 631..999 | + | 369 | WP_062864549.1 | hypothetical protein | - |
| CR539_RS24750 () | 1003..1218 | + | 216 | WP_000266543.1 | hypothetical protein | - |
| CR539_RS24760 () | 1416..2039 | - | 624 | WP_001155252.1 | DNA-binding protein | - |
| CR539_RS24765 () | 2204..2671 | + | 468 | WP_044789402.1 | thermonuclease family protein | - |
| CR539_RS24770 () | 2702..3399 | - | 698 | Protein_5 | IS1 family transposase IS1X3 | Transposase |
| CR539_RS28285 () | 3598..3774 | + | 177 | WP_001054907.1 | hypothetical protein | - |
| CR539_RS28105 () | 3985..4131 | - | 147 | WP_001346191.1 | hypothetical protein | - |
| CR539_RS28290 () | 4505..5305 | + | 801 | Protein_8 | hypothetical protein | VF |
| CR539_RS28295 () | 6176..7252 | + | 1077 | WP_172805379.1 | TraM recognition domain-containing protein | - |
| CR539_RS24785 () | 7473..10193 | - | 2721 | WP_101969575.1 | Protein TraI | Relaxase |
| CR539_RS24790 () | 10205..10537 | - | 333 | WP_001291057.1 | hypothetical protein | - |
| CR539_RS24795 () | 10770..11105 | + | 336 | WP_000157091.1 | hypothetical protein | - |
| CR539_RS24800 () | 11191..12039 | - | 849 | WP_001077048.1 | DUF4942 domain-containing protein | - |
| CR539_RS28300 () | 12388..12585 | + | 198 | WP_052974674.1 | hypothetical protein | - |
| CR539_RS24815 () | 12619..12870 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CR539_RS24820 () | 12901..13107 | - | 207 | WP_000150319.1 | hypothetical protein | VF |
| CR539_RS24825 () | 13166..14044 | - | 879 | WP_089655550.1 | Recombination-promoting nuclease RpnA | VF |
| CR539_RS24830 () | 14109..14375 | - | 267 | WP_001536681.1 | hypothetical protein | - |
| CR539_RS24835 () | 14466..14900 | - | 435 | WP_000218857.1 | hypothetical protein | - |
| CR539_RS24855 () | 15610..16110 | - | 501 | WP_044789608.1 | antirestriction protein ArdA | - |
| CR539_RS24865 () | 16576..17379 | - | 804 | WP_153060552.1 | plasmid SOS inhibition protein A | - |
| CR539_RS24870 () | 17376..17681 | - | 306 | Protein_22 | conjugation system SOS inhibitor PsiB | - |
| CR539_RS24875 () | 17867..18289 | + | 423 | WP_044789534.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CR539_RS24880 () | 18289..19249 | + | 961 | Protein_24 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CR539_RS24885 () | 19245..19397 | - | 153 | Protein_25 | IS481 family transposase ISErsp1 | Transposase |
| CR539_RS24895 () | 19830..20633 | - | 804 | WP_044789533.1 | 5-deoxy-glucuronate isomerase | - |
| CR539_RS24900 () | 20643..21533 | - | 891 | WP_044789531.1 | myo-inosose-2 dehydratase | - |
| CR539_RS24905 () | 21545..23449 | - | 1905 | WP_044789530.1 | 5-dehydro-2-deoxygluconokinase | - |
| CR539_RS24910 () | 23462..24595 | - | 1134 | WP_044789528.1 | Gfo/Idh/MocA family oxidoreductase | - |
| CR539_RS24915 () | 24604..25632 | - | 1029 | WP_013098254.1 | ABC transporter permease | - |
| CR539_RS24920 () | 25644..27191 | - | 1548 | WP_044789526.1 | Ribose import ATP-binding protein RbsA | VF |
| CR539_RS24925 () | 27240..28169 | - | 930 | WP_044789524.1 | sugar ABC transporter substrate-binding protein | - |
| CR539_RS24930 () | 28201..29187 | - | 987 | WP_013098257.1 | inositol 2-dehydrogenase | - |
| CR539_RS24935 () | 29446..31371 | - | 1926 | WP_044789523.1 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | - |
| CR539_RS24940 () | 31383..32888 | - | 1506 | WP_044789521.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| CR539_RS24945 () | 33181..34032 | + | 852 | WP_044789519.1 | MurR/RpiR family transcriptional regulator | - |
| CR539_RS24950 () | 34007..34912 | - | 906 | Protein_37 | IS3 family transposase ISLad1 | Transposase |
| CR539_RS24960 () | 34977..36128 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| CR539_RS24965 () | 36141..36395 | - | 255 | Protein_39 | IS3 family transposase ISLad1 | Transposase |
| CR539_RS24970 () | 36607..36903 | - | 297 | Protein_40 | hypothetical protein | - |
| CR539_RS24975 () | 36938..37192 | - | 255 | WP_161953834.1 | DNA polymerase III subunit theta | - |
| CR539_RS24980 () | 37385..37576 | - | 192 | WP_008455403.1 | hypothetical protein | - |
| CR539_RS24985 () | 37619..38125 | - | 507 | WP_044789508.1 | antirestriction protein ArdA | - |
| CR539_RS24990 () | 38483..39154 | + | 672 | WP_089655564.1 | SOS response-associated peptidase family protein | - |
| CR539_RS24995 () | 39334..39756 | + | 423 | WP_044789503.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CR539_RS25000 () | 39756..41030 | + | 1275 | WP_101969576.1 | Y-family DNA polymerase | - |
| CR539_RS25005 () | 41112..42086 | - | 975 | WP_044789500.1 | ParB/RepB/Spo0J family partition protein | - |
| CR539_RS25010 () | 42086..43291 | - | 1206 | WP_044789499.1 | AAA family ATPase | - |
| CR539_RS25015 () | 43938..45100 | + | 1163 | WP_101969577.1 | IS3 family transposase ISEc17 | Transposase |
| CR539_RS25020 () | 45835..46362 | + | 528 | WP_044789347.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| CR539_RS25030 () | 46688..48436 | - | 1749 | WP_044789349.1 | NERD domain-containing protein | - |
| CR539_RS25035 () | 48591..48965 | - | 375 | Protein_52 | hypothetical protein | - |
| CR539_RS25040 () | 49218..49541 | + | 324 | WP_044789354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR539_RS25045 () | 49590..49886 | + | 297 | WP_044789356.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CR539_RS25050 () | 50327..50959 | - | 633 | WP_044789357.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CR539_RS25055 () | 51381..51905 | + | 525 | WP_044789358.1 | hypothetical protein | - |
| CR539_RS25060 () | 52178..52534 | + | 357 | WP_044789359.1 | hypothetical protein | - |
| CR539_RS25065 () | 52614..53433 | + | 820 | Protein_58 | hypothetical protein | - |
| CR539_RS25075 () | 54651..56153 | - | 1503 | WP_101969578.1 | hypothetical protein | - |
| CR539_RS25080 () | 56510..57674 | - | 1165 | Protein_60 | IS3 family transposase ISEc17 | Transposase |
| CR539_RS25090 () | 57995..58372 | + | 378 | Protein_61 | Cholera enterotoxin subunit B | VF |
| CR539_RS28305 () | 58785..59387 | - | 603 | WP_179292030.1 | hypothetical protein | VF |
| CR539_RS25100 () | 59812..60450 | + | 639 | WP_044789364.1 | response regulator transcription factor | - |
| CR539_RS25105 () | 60461..60886 | - | 426 | WP_052835305.1 | hypothetical protein | VF |
| CR539_RS25110 () | 60865..61596 | - | 732 | WP_044789366.1 | Leader peptidase PppA | VF |
| CR539_RS25115 () | 61601..62593 | - | 993 | WP_162841998.1 | ComG operon protein 1 | VF |
| CR539_RS25120 () | 62574..63644 | - | 1071 | WP_032256103.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CR539_RS25125 () | 63637..65256 | - | 1620 | WP_032279923.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CR539_RS25130 () | 65271..65657 | - | 387 | WP_129944522.1 | hypothetical protein | VF |
| CR539_RS25135 () | 65699..66964 | - | 1266 | WP_044789369.1 | hypothetical protein | VF |
| CR539_RS25140 () | 66966..68636 | - | 1671 | WP_044789371.1 | Outer membrane lipoprotein BfpB | VF |
| CR539_RS25145 () | 68649..69296 | - | 648 | WP_044789373.1 | hypothetical protein | VF |
| CR539_RS25150 () | 69345..69962 | - | 618 | WP_052835307.1 | Major structural subunit of bundle-forming pilus | VF |
| CR539_RS25155 () | 70171..70992 | + | 822 | WP_097680219.1 | hypothetical protein | - |
| CR539_RS25160 () | 70982..71512 | + | 531 | WP_044789377.1 | hypothetical protein | - |
| CR539_RS25165 () | 71518..71937 | + | 420 | WP_044789379.1 | hypothetical protein | - |
| CR539_RS25170 () | 71934..72455 | + | 522 | WP_044789380.1 | type II secretion system GspH family protein | - |
| CR539_RS25175 () | 72409..72975 | + | 567 | WP_044789382.1 | hypothetical protein | - |
| CR539_RS28120 () | 73271..73423 | + | 153 | WP_157896665.1 | IS3 family transposase IS3H | Transposase |
| CR539_RS25180 () | 73643..73831 | + | 189 | WP_101969580.1 | transposase | - |
| CR539_RS25185 () | 74761..75558 | - | 798 | Protein_81 | IS21 family transposase IS21 | Transposase |
| CR539_RS25190 () | 75687..76915 | + | 1229 | WP_116315299.1 | IS3 family transposase IS2 | Transposase |
| CR539_RS25195 () | 76927..78066 | - | 1140 | Protein_83 | IS21 family transposase IS21 | Transposase |
| CR539_RS25200 () | 78424..78678 | + | 255 | Protein_84 | IS3 family transposase IS2 | Transposase |
| CR539_RS25205 () | 78689..78926 | - | 238 | Protein_85 | colicin V | - |
| CR539_RS28125 () | 78904..79140 | - | 237 | WP_032257624.1 | colicin V immunity protein | - |
| CR539_RS25215 () | 79603..79878 | - | 276 | WP_044789386.1 | hypothetical protein | - |
| CR539_RS25220 () | 79984..80259 | - | 276 | WP_044789388.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR539_RS25225 () | 80259..80543 | - | 285 | WP_044789390.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CR539_RS25240 () | 81455..82312 | - | 858 | WP_153071841.1 | incFII family plasmid replication initiator RepA | - |
| CR539_RS25245 () | 82305..82379 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| CR539_RS25255 () | 82615..82872 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| CR539_RS25260 () | 83112..83702 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| CR539_RS25265 () | 83740..83949 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| CR539_RS25270 () | 83995..84456 | - | 462 | WP_153071840.1 | thermonuclease family protein | - |
| CR539_RS25275 () | 84701..84913 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| CR539_RS25280 () | 85042..85602 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| CR539_RS25285 () | 85705..86565 | - | 861 | WP_101969583.1 | putative protein YcjY | VF |
| CR539_RS25290 () | 86624..87370 | - | 747 | WP_000205736.1 | conjugal transfer pilus acetylase TraX | - |
| CR539_RS25295 () | 87390..92660 | - | 5271 | WP_101969584.1 | Multifunctional conjugation protein TraI | Relaxase |
| CR539_RS25300 () | 92660..93772 | - | 1113 | Protein_101 | Coupling protein TraD | VF |
| CR539_RS25305 () | 93898..94191 | - | 294 | WP_002430945.1 | hypothetical protein | - |
| CR539_RS25310 () | 94339..95301 | + | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| CR539_RS25315 () | 95304..95654 | + | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| CR539_RS25325 () | 96057..96509 | - | 453 | WP_000670962.1 | N-acetyltransferase | - |
| CR539_RS25330 () | 97039..97248 | + | 210 | WP_001535752.1 | microcin B17 | - |
| CR539_RS25335 () | 97387..98615 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| CR539_RS25340 () | 98626..99426 | + | 801 | Protein_108 | YcaO-like family protein | - |
| CR539_RS25345 () | 99436..100161 | + | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| CR539_RS25350 () | 100158..100889 | + | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| CR539_RS25355 () | 100893..101456 | + | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| CR539_RS25360 () | 102026..102565 | + | 540 | Protein_112 | hypothetical protein | - |
| CR539_RS25370 () | 104026..104331 | + | 306 | Protein_114 | IS110 family transposase IS1663 | Transposase |
| CR539_RS25375 () | 104427..104627 | - | 201 | Protein_115 | transposase | - |
| CR539_RS25380 () | 104680..105787 | - | 1108 | Protein_116 | IS3 family transposase | - |
| CR539_RS25385 () | 105854..106066 | + | 213 | Protein_117 | IS21 family transposase IS100kyp | Transposase |
| CR539_RS25390 () | 106253..106630 | - | 378 | WP_071829605.1 | Cholera enterotoxin subunit B | VF |
| CR539_RS25395 () | 106678..107535 | - | 858 | WP_071829606.1 | hypothetical protein | - |
| CR539_RS25400 () | 108148..108473 | + | 326 | Protein_120 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|