MGE detailed information
MGE type: Genomic_island MGE length: 24473 bp
Accession: NZ_CP024090 Location: 3637559..3662031 Organism: Escherichia coli strain WG5 Replicon: chromosome
Accession: NZ_CP024090 Location: 3637559..3662031 Organism: Escherichia coli strain WG5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSR56_RS18540 () | 3632576..3632928 | - | 353 | Protein_3394 | peptide chain release factor H | - |
| CSR56_RS18545 () | 3632924..3633130 | - | 207 | Protein_3395 | RtcB family protein | - |
| CSR56_RS18555 () | 3633447..3633899 | - | 453 | WP_071780660.1 | GNAT family N-acetyltransferase | - |
| CSR56_RS18560 () | 3633896..3634951 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| CSR56_RS18565 () | 3635022..3635807 | - | 786 | WP_000207555.1 | putative lateral flagellar export/assembly protein LafU | - |
| CSR56_RS18570 () | 3635779..3637501 | + | 1723 | Protein_3399 | flagellar biosynthesis protein FlhA | - |
| CSR56_RS18575 () | 3637580..3637936 | + | 357 | WP_047402977.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CSR56_RS18580 () | 3637993..3638766 | - | 774 | WP_122990173.1 | Murein DD-endopeptidase MepH | VF |
| CSR56_RS18585 () | 3638952..3639212 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| CSR56_RS18590 () | 3639215..3639493 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| CSR56_RS18595 () | 3639649..3640389 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| CSR56_RS18600 () | 3640360..3641127 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| CSR56_RS18605 () | 3641336..3641914 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| CSR56_RS18610 () | 3642154..3644598 | + | 2445 | WP_047402958.1 | Acyl-coenzyme A dehydrogenase | VF |
| CSR56_RS18615 () | 3644641..3645087 | - | 447 | WP_047402973.1 | Ivy family C-type lysozyme inhibitor | - |
| CSR56_RS18620 () | 3645268..3646038 | + | 771 | WP_001118041.1 | 2-oxoglutaramate amidase | - |
| CSR56_RS18625 () | 3646090..3646464 | - | 375 | Protein_3410 | ISAs1 family transposase | - |
| CSR56_RS18630 () | 3646510..3647646 | - | 1137 | Protein_3411 | ISAs1 family transposase ISEc1 | Transposase |
| CSR56_RS18645 () | 3648392..3648901 | - | 510 | WP_001419315.1 | sel1 repeat family protein | - |
| CSR56_RS18650 () | 3648970..3650454 | - | 1485 | Protein_3413 | Protein RhsD | VF |
| CSR56_RS18655 () | 3650660..3651397 | - | 738 | WP_001625207.1 | hypothetical protein | VF |
| CSR56_RS18660 () | 3651501..3652106 | - | 606 | Protein_3415 | RHS repeat-associated core domain-containing protein | - |
| CSR56_RS18665 () | 3652119..3653255 | - | 1137 | WP_053889911.1 | ISAs1 family transposase ISEc1 | Transposase |
| CSR56_RS18670 () | 3653604..3654041 | - | 438 | WP_001350058.1 | hypothetical protein | - |
| CSR56_RS18675 () | 3654001..3655291 | - | 1291 | Protein_3418 | Protein RhsD | VF |
| CSR56_RS18680 () | 3655345..3655848 | + | 504 | Protein_3419 | hypothetical protein | VF |
| CSR56_RS18685 () | 3655872..3656354 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| CSR56_RS18690 () | 3656398..3657312 | + | 915 | WP_000908057.1 | hypothetical protein | - |
| CSR56_RS18695 () | 3657322..3657801 | + | 480 | WP_001236652.1 | hypothetical protein | - |
| CSR56_RS18700 () | 3657938..3658723 | - | 786 | WP_001086142.1 | aminopeptidase | - |
| CSR56_RS18715 () | 3659260..3659991 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| CSR56_RS18720 () | 3660056..3660523 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| CSR56_RS18725 () | 3660520..3661242 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| CSR56_RS18730 () | 3661276..3662031 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| CSR56_RS18735 () | 3662103..3663461 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| CSR56_RS18740 () | 3663509..3664279 | - | 771 | WP_000211686.1 | class I SAM-dependent methyltransferase | - |
| CSR56_RS18745 () | 3664357..3665157 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CSR56_RS18750 () | 3665398..3666312 | + | 915 | WP_000648583.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Genomic island | TA75077 | NZ_CP020543 | 3657894..3682366 | 0 |