MGE detailed information
MGE type: Genomic_island MGE length: 23031 bp
Accession: NZ_CP024090 Location: 3601416..3624446 Organism: Escherichia coli strain WG5 Replicon: chromosome
Accession: NZ_CP024090 Location: 3601416..3624446 Organism: Escherichia coli strain WG5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSR56_RS18325 () | 3596731..3598239 | + | 1509 | WP_032206693.1 | group II intron reverse transcriptase/maturase | - |
| CSR56_RS18330 () | 3598320..3598807 | + | 488 | Protein_3353 | IS3 family transposase | - |
| CSR56_RS18335 () | 3598705..3600003 | - | 1299 | WP_000342159.1 | IS256 family transposase | - |
| CSR56_RS18345 () | 3600221..3600385 | - | 165 | Protein_3355 | transposase domain-containing protein | - |
| CSR56_RS23575 () | 3600330..3600593 | - | 264 | WP_001247776.1 | transposase | - |
| CSR56_RS23580 () | 3600608..3600871 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| CSR56_RS18355 () | 3601100..3601381 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| CSR56_RS18360 () | 3601416..3601985 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| CSR56_RS18365 () | 3602091..3604973 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| CSR56_RS18370 () | 3604973..3605164 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| CSR56_RS18375 () | 3605225..3606953 | + | 1729 | Protein_3362 | ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein | - |
| CSR56_RS18380 () | 3607041..3607499 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| CSR56_RS18385 () | 3607522..3608436 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| CSR56_RS18390 () | 3608539..3609426 | + | 888 | WP_081508864.1 | heat resistance protein YfdX2 | - |
| CSR56_RS18395 () | 3609516..3610127 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| CSR56_RS18400 () | 3610207..3611352 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| CSR56_RS18405 () | 3611342..3611782 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| CSR56_RS18410 () | 3611786..3613501 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| CSR56_RS18415 () | 3613498..3613995 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| CSR56_RS18420 () | 3613973..3614938 | + | 966 | WP_000196689.1 | M48 family metalloprotease | - |
| CSR56_RS18425 () | 3614963..3616114 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| CSR56_RS18430 () | 3616339..3616908 | - | 570 | Protein_3373 | IS5 family transposase ISThi1 | Transposase |
| CSR56_RS18435 () | 3616904..3617598 | - | 695 | Protein_3374 | IS5 family transposase ISThi1 | Transposase |
| CSR56_RS18440 () | 3618030..3618893 | + | 864 | WP_081508865.1 | GTPase family protein | - |
| CSR56_RS18445 () | 3618985..3619806 | + | 822 | WP_000197388.1 | DUF945 domain-containing protein | - |
| CSR56_RS18450 () | 3620023..3620724 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| CSR56_RS18455 () | 3620765..3621001 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| CSR56_RS18460 () | 3621001..3621444 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| CSR56_RS18465 () | 3621467..3621934 | + | 468 | WP_001385283.1 | hypothetical protein | - |
| CSR56_RS18470 () | 3622011..3622250 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| CSR56_RS18475 () | 3622348..3622806 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| CSR56_RS18480 () | 3622822..3623298 | + | 477 | WP_000811693.1 | RadC family protein | - |
| CSR56_RS18485 () | 3623307..3623528 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| CSR56_RS18490 () | 3623547..3623864 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| CSR56_RS18495 () | 3623885..3624226 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| CSR56_RS18505 () | 3624798..3626051 | - | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CSR56_RS18510 () | 3626063..3627166 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CSR56_RS18515 () | 3627454..3628509 | + | 1056 | WP_045145434.1 | phosphoporin PhoE | - |
| CSR56_RS18520 () | 3628548..3628949 | - | 402 | WP_047402959.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Genomic island | TA75076 | NZ_CP020543 | 3621751..3644781 | 0 |