MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88839 bp
Accession: NZ_CP024055 Location: 1..88839 Organism: Escherichia coli strain SMN197SH3 Replicon: plasmid pO177A3
Accession: NZ_CP024055 Location: 1..88839 Organism: Escherichia coli strain SMN197SH3 Replicon: plasmid pO177A3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRT55_RS00390 () | 1..1440 | + | 1440 | WP_032204690.1 | Hemolysin secretion protein D, chromosomal | VF |
| CRT55_RS29685 () | 1632..1793 | + | 162 | Protein_1 | lipid II-degrading bacteriocin | - |
| CRT55_RS00400 () | 1843..2196 | - | 354 | WP_000864811.1 | colicin M immunity protein | - |
| CRT55_RS00405 () | 2368..3151 | - | 784 | Protein_3 | site-specific integrase | - |
| CRT55_RS00410 () | 3153..3566 | - | 414 | WP_062882354.1 | hypothetical protein | - |
| CRT55_RS00415 () | 3624..5162 | - | 1539 | WP_101974169.1 | IS66 family transposase ISEc8 | Transposase |
| CRT55_RS00420 () | 5212..5559 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CRT55_RS00425 () | 5556..5936 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CRT55_RS00430 () | 6170..6535 | - | 366 | WP_032205206.1 | hypothetical protein | - |
| CRT55_RS00435 () | 6546..6737 | - | 192 | WP_000789660.1 | hypothetical protein | - |
| CRT55_RS00440 () | 7042..10944 | - | 3903 | WP_062881749.1 | Serine protease EspP | VF |
| CRT55_RS00445 () | 11387..12925 | - | 1539 | WP_101974169.1 | IS66 family transposase ISEc8 | Transposase |
| CRT55_RS00450 () | 12975..13322 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CRT55_RS00455 () | 13582..13962 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CRT55_RS00460 () | 13959..14306 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CRT55_RS00465 () | 14356..15894 | + | 1539 | WP_101974169.1 | IS66 family transposase ISEc8 | Transposase |
| CRT55_RS00470 () | 15931..16170 | - | 240 | Protein_16 | transposase | - |
| CRT55_RS00475 () | 16488..17486 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CRT55_RS00480 () | 17560..19281 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| CRT55_RS00485 () | 19371..20477 | - | 1107 | WP_064769442.1 | glycosyltransferase family 4 protein | - |
| CRT55_RS00490 () | 20477..21298 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| CRT55_RS00495 () | 21565..21786 | - | 222 | WP_001364581.1 | hypothetical protein | - |
| CRT55_RS00510 () | 24021..24350 | - | 330 | Protein_23 | conjugal transfer protein TraD | - |
| CRT55_RS00515 () | 24602..25333 | - | 732 | WP_000850423.1 | complement resistance protein TraT | - |
| CRT55_RS00520 () | 25347..25790 | - | 444 | Protein_25 | conjugal transfer entry exclusion protein TraS | - |
| CRT55_RS00525 () | 25856..27018 | + | 1163 | WP_096851682.1 | IS3 family transposase ISEc17 | Transposase |
| CRT55_RS00530 () | 27032..29809 | - | 2778 | WP_096851683.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CRT55_RS00535 () | 29806..31179 | - | 1374 | WP_062881573.1 | conjugal transfer protein TraH | - |
| CRT55_RS00540 () | 31166..31591 | - | 426 | WP_074433934.1 | F-type conjugal transfer protein TrbF | - |
| CRT55_RS00545 () | 31545..31886 | - | 342 | WP_074433933.1 | P-type conjugative transfer protein TrbJ | - |
| CRT55_RS00550 () | 31816..32361 | - | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CRT55_RS00555 () | 32348..32632 | - | 285 | WP_062881570.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CRT55_RS00565 () | 32990..33337 | - | 348 | WP_001287908.1 | conjugal transfer protein TrbA | - |
| CRT55_RS00570 () | 33353..34096 | - | 744 | WP_062881569.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CRT55_RS00575 () | 34089..34346 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| CRT55_RS00580 () | 34373..35764 | - | 1392 | WP_074433935.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CRT55_RS00585 () | 35757..36056 | - | 300 | Protein_37 | DUF932 domain-containing protein | - |
| CRT55_RS00590 () | 36175..36462 | - | 288 | WP_062881567.1 | hypothetical protein | - |
| CRT55_RS30275 () | 36487..36645 | - | 159 | WP_062881566.1 | hypothetical protein | - |
| CRT55_RS00610 () | 37208..37399 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| CRT55_RS00615 () | 37396..37818 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| CRT55_RS00620 () | 37865..38167 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| CRT55_RS00625 () | 38495..39241 | - | 747 | Protein_43 | hypothetical protein | - |
| CRT55_RS00630 () | 39287..39846 | - | 560 | Protein_44 | DUF1380 family protein | - |
| CRT55_RS00640 () | 39956..40639 | - | 684 | WP_000085939.1 | DNA methylase | - |
| CRT55_RS00645 () | 40716..41021 | - | 306 | WP_062881562.1 | hypothetical protein | - |
| CRT55_RS00650 () | 41025..41927 | - | 903 | WP_096851684.1 | DUF1281 domain-containing protein | - |
| CRT55_RS00660 () | 42579..43550 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CRT55_RS00665 () | 43550..44716 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| CRT55_RS00680 () | 47364..48341 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| CRT55_RS00685 () | 48626..49366 | - | 741 | WP_062882567.1 | tyrosine-type recombinase/integrase | - |
| CRT55_RS00690 () | 49490..49707 | - | 218 | Protein_53 | serine/threonine protein kinase | - |
| CRT55_RS30280 () | 49839..50304 | - | 466 | Protein_54 | Transcriptional repressor MprA | VF |
| CRT55_RS00710 () | 50258..51153 | - | 896 | Protein_55 | IS3 family transposase IS1203 | Transposase |
| CRT55_RS00715 () | 51262..51651 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| CRT55_RS00720 () | 51695..53905 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| CRT55_RS00725 () | 54081..55294 | + | 1214 | WP_199770264.1 | IS3 family transposase IS629 | Transposase |
| CRT55_RS00730 () | 55336..55509 | - | 174 | Protein_59 | IS3 family transposase ISEc17 | Transposase |
| CRT55_RS29690 () | 55964..56017 | + | 54 | WP_106879220.1 | helix-turn-helix domain-containing protein | - |
| CRT55_RS00735 () | 56099..56481 | + | 383 | Protein_61 | IS200-IS605 family transposase ISEc46 | Transposase |
| CRT55_RS00740 () | 56506..57535 | - | 1030 | Protein_62 | IS630 family transposase | - |
| CRT55_RS00745 () | 57637..57855 | + | 219 | Protein_63 | transposase | - |
| CRT55_RS30285 () | 58157..60361 | + | 2205 | Protein_64 | glycosyl transferase | - |
| CRT55_RS00755 () | 61355..67102 | + | 5748 | WP_197733157.1 | DUF3491 domain-containing protein | - |
| CRT55_RS00760 () | 67205..68418 | + | 1214 | WP_162829200.1 | IS3 family transposase IS629 | Transposase |
| CRT55_RS00765 () | 68635..68910 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CRT55_RS00770 () | 68910..69194 | - | 285 | WP_062881718.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CRT55_RS00780 () | 70106..70963 | - | 858 | WP_096851680.1 | incFII family plasmid replication initiator RepA | - |
| CRT55_RS00785 () | 70956..71438 | - | 483 | WP_001523473.1 | hypothetical protein | - |
| CRT55_RS00790 () | 71431..71505 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| CRT55_RS00800 () | 71737..71994 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| CRT55_RS00805 () | 72278..72484 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 72471..72532 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 72471..72532 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 72471..72532 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 72471..72532 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| CRT55_RS30290 () | 72788..72862 | - | 75 | Protein_74 | endonuclease | - |
| CRT55_RS00815 () | 73108..73320 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| CRT55_RS00820 () | 73456..74016 | - | 561 | WP_062881716.1 | fertility inhibition protein FinO | - |
| CRT55_RS00825 () | 74071..74817 | - | 747 | WP_062881715.1 | conjugal transfer pilus acetylase TraX | - |
| CRT55_RS00830 () | 74837..80107 | - | 5271 | WP_096851681.1 | Multifunctional conjugation protein TraI | Relaxase |
| CRT55_RS00835 () | 80189..80416 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| CRT55_RS00840 () | 80416..80814 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CRT55_RS00845 () | 80823..82694 | - | 1872 | Protein_81 | type IV conjugative transfer system coupling protein TraD | - |
| CRT55_RS00855 () | 83153..83668 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| CRT55_RS00860 () | 83670..86666 | + | 2997 | WP_062882355.1 | Hemolysin, chromosomal | VF |
| CRT55_RS00865 () | 86716..88836 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|