MGE detailed information
MGE type: Genomic_island MGE length: 26521 bp
Accession: NZ_CP023662 Location: 2809374..2835894 Organism: Xanthomonas citri pv. citri strain Xcc49 Replicon: chromosome
Accession: NZ_CP023662 Location: 2809374..2835894 Organism: Xanthomonas citri pv. citri strain Xcc49 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA10_RS12855 () | 2806296..2806472 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| CPA10_RS12860 () | 2806692..2807093 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| CPA10_RS12870 () | 2807382..2808473 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| CPA10_RS12880 () | 2809374..2811545 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| CPA10_RS12885 () | 2811555..2812076 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| CPA10_RS23995 () | 2812941..2813897 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| CPA10_RS12900 () | 2813964..2815097 | - | 1134 | Protein_2391 | IS5 family transposase ISXo4 | Transposase |
| CPA10_RS12905 () | 2815137..2816224 | - | 1088 | Protein_2392 | IS3 family transposase ISXcd1 | Transposase |
| CPA10_RS12910 () | 2816437..2816616 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| CPA10_RS12915 () | 2816887..2817201 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| CPA10_RS12920 () | 2817204..2817494 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CPA10_RS12925 () | 2817482..2817760 | - | 279 | WP_040259533.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| CPA10_RS12930 () | 2817930..2819198 | - | 1269 | Protein_2397 | Tn3 family transposase ISPsy42 | Transposase |
| CPA10_RS12935 () | 2819247..2820472 | + | 1226 | Protein_2398 | IS3 family transposase ISJsp1 | Transposase |
| CPA10_RS12940 () | 2821091..2822047 | + | 957 | WP_015463313.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CPA10_RS12945 () | 2822237..2824345 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| CPA10_RS12950 () | 2824396..2824584 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| CPA10_RS12955 () | 2824581..2826167 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| CPA10_RS12960 () | 2826164..2827081 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| CPA10_RS12965 () | 2827090..2827419 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| CPA10_RS12970 () | 2827523..2827933 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| CPA10_RS12980 () | 2828324..2828524 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| CPA10_RS12985 () | 2829085..2829345 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| CPA10_RS12990 () | 2829744..2830745 | - | 1002 | WP_011051588.1 | replication protein | - |
| CPA10_RS12995 () | 2830978..2831211 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| CPA10_RS13000 () | 2831790..2833184 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| CPA10_RS13005 () | 2833181..2835298 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| CPA10_RS23865 () | 2835718..2835894 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| CPA10_RS13010 () | 2836177..2837283 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| CPA10_RS13015 () | 2837326..2837835 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| CPA10_RS13020 () | 2837847..2839505 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| CPA10_RS13025 () | 2839816..2840421 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |