MGE detailed information
MGE type: Prophage MGE length: 29419 bp
Accession: NZ_CP023583 Location: 3547414..3576832 Organism: Mycobacterium tuberculosis strain MDRDM260 Replicon: chromosome
Accession: NZ_CP023583 Location: 3547414..3576832 Organism: Mycobacterium tuberculosis strain MDRDM260 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP439_RS17365 () | 3542656..3544143 | + | 1488 | WP_003416624.1 | amidase | - |
| CP439_RS17370 () | 3544140..3545096 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CP439_RS17375 () | 3545243..3546103 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP439_RS17380 () | 3546078..3546593 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP439_RS17390 () | 3546833..3547126 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP439_RS17395 () | 3547414..3548703 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CP439_RS17400 () | 3549050..3549484 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP439_RS17405 () | 3549487..3549939 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP439_RS17410 () | 3550170..3550514 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP439_RS17415 () | 3550511..3550840 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP439_RS17420 () | 3551077..3552338 | + | 1262 | WP_096868035.1 | IS3 family transposase IS987 | Transposase |
| CP439_RS17425 () | 3552560..3553821 | + | 1262 | WP_096868035.1 | IS3 family transposase IS987 | Transposase |
| CP439_RS17430 () | 3554094..3554441 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP439_RS17435 () | 3554438..3555058 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP439_RS17440 () | 3555218..3556483 | - | 1266 | WP_003912135.1 | hypothetical protein | - |
| CP439_RS17445 () | 3556651..3556860 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP439_RS17455 () | 3557107..3558141 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP439_RS17460 () | 3558425..3558649 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP439_RS17475 () | 3559359..3559820 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| CP439_RS17480 () | 3559990..3562968 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP439_RS17485 () | 3563060..3564082 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP439_RS17490 () | 3564160..3565578 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CP439_RS17495 () | 3565617..3566483 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP439_RS17500 () | 3566492..3566665 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP439_RS17505 () | 3566820..3568163 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP439_RS17510 () | 3568197..3568475 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP439_RS17515 () | 3568905..3571007 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP439_RS17520 () | 3571131..3571385 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP439_RS17525 () | 3571398..3572339 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP439_RS17530 () | 3572398..3573465 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP439_RS17535 () | 3573527..3576832 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP439_RS17540 () | 3576829..3579996 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP439_RS17545 () | 3580082..3580291 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP439_RS17550 () | 3580322..3581107 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP439_RS17555 () | 3581110..3581415 | + | 306 | WP_003416847.1 | MGMT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.003 |