MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 45014 bp
Accession: NZ_CP023565 Location: 498063..543076 Organism: Ligilactobacillus murinus strain CR147 Replicon: chromosome
Accession: NZ_CP023565 Location: 498063..543076 Organism: Ligilactobacillus murinus strain CR147 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPS94_RS02460 () | 498063..498545 | + | 483 | WP_112195360.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CPS94_RS02465 () | 498860..499114 | + | 255 | WP_112195358.1 | hypothetical protein | - |
| CPS94_RS02470 () | 499155..499412 | + | 258 | WP_112195356.1 | hypothetical protein | - |
| CPS94_RS02475 () | 499665..499853 | + | 189 | WP_076150269.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CPS94_RS02480 () | 499932..500315 | + | 384 | WP_167397199.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CPS94_RS02485 () | 500607..500734 | - | 128 | Protein_487 | AraC family ligand binding domain-containing protein | - |
| CPS94_RS02490 () | 500811..501248 | - | 438 | WP_112195353.1 | Rrf2 family transcriptional regulator | - |
| CPS94_RS02495 () | 501510..502841 | + | 1332 | WP_112195351.1 | M20/M25/M40 family metallo-hydrolase | - |
| CPS94_RS02500 () | 502971..504665 | + | 1695 | WP_112195349.1 | oleate hydratase | - |
| CPS94_RS02505 () | 505087..506038 | + | 952 | Protein_491 | DUF871 domain-containing protein | - |
| CPS94_RS02510 () | 506094..506933 | + | 840 | WP_112195347.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CPS94_RS02515 () | 507082..507678 | + | 597 | WP_112195345.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CPS94_RS02520 () | 507782..508657 | + | 876 | WP_112195342.1 | restriction endonuclease | - |
| CPS94_RS02525 () | 508659..511892 | + | 3234 | WP_112195340.1 | DEAD/DEAH box helicase family protein | - |
| CPS94_RS02530 () | 511882..512946 | + | 1065 | WP_162626395.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| CPS94_RS02540 () | 513359..513826 | + | 468 | WP_004048046.1 | DNA starvation/stationary phase protection protein | - |
| CPS94_RS02545 () | 513964..514332 | + | 369 | WP_004048045.1 | ACT domain-containing protein | - |
| CPS94_RS02550 () | 514393..514890 | + | 498 | WP_112195336.1 | hypothetical protein | - |
| CPS94_RS02555 () | 514955..515152 | + | 198 | WP_004048043.1 | hypothetical protein | - |
| CPS94_RS02560 () | 515184..515366 | + | 183 | WP_112195334.1 | hypothetical protein | - |
| CPS94_RS02565 () | 515671..515943 | + | 273 | WP_112195331.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CPS94_RS02570 () | 515946..516218 | + | 273 | WP_112195329.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| CPS94_RS02575 () | 516533..517495 | - | 963 | WP_004048827.1 | IS30 family transposase IS1252 | Transposase |
| CPS94_RS02580 () | 517546..518394 | + | 849 | WP_112286358.1 | GIY-YIG nuclease family protein | - |
| CPS94_RS02585 () | 518536..519468 | + | 933 | WP_112195326.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CPS94_RS02590 () | 519550..520074 | - | 525 | WP_202863187.1 | restriction endonuclease subunit S | - |
| CPS94_RS02595 () | 520459..521700 | + | 1242 | WP_162626396.1 | restriction endonuclease subunit S | - |
| CPS94_RS02600 () | 521719..523338 | + | 1620 | WP_076150067.1 | type I restriction-modification system subunit M | - |
| CPS94_RS02605 () | 523436..523903 | + | 468 | WP_112286521.1 | restriction endonuclease subunit S | - |
| CPS94_RS02610 () | 524294..524815 | + | 522 | WP_162626397.1 | restriction endonuclease subunit S | - |
| CPS94_RS02615 () | 524965..525558 | + | 594 | WP_076150286.1 | restriction endonuclease subunit S | - |
| CPS94_RS02620 () | 525548..528607 | + | 3060 | WP_112195316.1 | type I restriction endonuclease subunit R | - |
| CPS94_RS11290 () | 528630..528803 | + | 174 | WP_162626398.1 | hypothetical protein | - |
| CPS94_RS02625 () | 529066..529601 | + | 536 | Protein_515 | IS30 family transposase IS1252 | Transposase |
| CPS94_RS02630 () | 530136..530501 | + | 366 | WP_004048026.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CPS94_RS02635 () | 530488..530769 | + | 282 | WP_004048025.1 | helix-turn-helix domain-containing protein | - |
| CPS94_RS02640 () | 531214..532179 | + | 966 | WP_112195314.1 | ADP-ribosylglycohydrolase family protein | - |
| CPS94_RS02645 () | 532535..535570 | + | 3036 | WP_112286361.1 | replication ATP-dependent helicase | - |
| CPS94_RS02650 () | 535894..536208 | + | 315 | WP_112286522.1 | hypothetical protein | - |
| CPS94_RS02655 () | 536201..537730 | + | 1530 | WP_112286362.1 | alpha/beta hydrolase | - |
| CPS94_RS02660 () | 537923..538231 | + | 309 | WP_056960100.1 | 50S ribosomal protein L21 | - |
| CPS94_RS02665 () | 538253..538579 | + | 327 | WP_112195305.1 | ribosomal-processing cysteine protease Prp | - |
| CPS94_RS02670 () | 538602..538883 | + | 282 | WP_004048016.1 | 50S ribosomal protein L27 | - |
| CPS94_RS02675 () | 539020..539898 | - | 879 | WP_112195303.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CPS94_RS02680 () | 540112..540834 | + | 723 | WP_004048013.1 | UMP kinase | - |
| CPS94_RS02685 () | 540843..541406 | + | 564 | WP_004048012.1 | ribosome recycling factor | - |
| CPS94_RS02690 () | 541512..542288 | + | 777 | WP_112195301.1 | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) | VF |
| CPS94_RS02695 () | 542288..543076 | + | 789 | WP_112195299.1 | hypothetical protein | VF |
| CPS94_RS02700 () | 543110..544384 | + | 1275 | WP_112195297.1 | RIP metalloprotease RseP | - |
| CPS94_RS02705 () | 544412..546133 | + | 1722 | WP_112195295.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|