MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP023541 Location: 483462..492812 Organism: Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 Replicon: chromosome
Accession: NZ_CP023541 Location: 483462..492812 Organism: Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR208_RS02210 () | 480193..480912 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| CR208_RS02215 () | 480909..482540 | - | 1632 | WP_032317150.1 | sensor histidine kinase | - |
| CR208_RS02220 () | 482721..482951 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| CR208_RS02225 () | 482963..483235 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CR208_RS02230 () | 483462..483758 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CR208_RS02235 () | 483786..483959 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CR208_RS02240 () | 484078..485595 | - | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| CR208_RS02245 () | 485832..487289 | - | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| CR208_RS02250 () | 487348..489495 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CR208_RS02255 () | 489575..490909 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CR208_RS02260 () | 491274..492812 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CR208_RS02270 () | 493611..494186 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| CR208_RS02275 () | 494223..495920 | - | 1698 | WP_000068907.1 | protein-disulfide reductase DsbD | - |
| CR208_RS02280 () | 495896..496234 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| CR208_RS02285 () | 496350..497651 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |