MGE detailed information
MGE type: Mobilizable plasmid MGE length: 75566 bp
Accession: NZ_CP023533 Location: 1..75566 Organism: Escherichia coli strain FDAARGOS_403 Replicon: plasmid unnamed2
Accession: NZ_CP023533 Location: 1..75566 Organism: Escherichia coli strain FDAARGOS_403 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO706_RS00110 () | 103..264 | + | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CO706_RS00115 () | 387..512 | + | 126 | WP_032159539.1 | hypothetical protein | - |
| CO706_RS00120 () | 633..1373 | + | 741 | WP_001066951.1 | tyrosine-type recombinase/integrase | - |
| CO706_RS00125 () | 1652..2629 | - | 978 | WP_001387465.1 | RepB family plasmid replication initiator protein | - |
| CO706_RS00135 () | 3715..3870 | + | 156 | WP_000332512.1 | transposase domain-containing protein | - |
| CO706_RS00140 () | 3953..4354 | - | 402 | WP_001392130.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CO706_RS00145 () | 4378..4608 | - | 231 | WP_001261288.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CO706_RS00150 () | 5203..5421 | + | 219 | WP_000813638.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CO706_RS00155 () | 5423..5728 | + | 306 | WP_001159872.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CO706_RS00160 () | 5729..6535 | + | 807 | WP_000016961.1 | site-specific integrase | - |
| CO706_RS00165 () | 6714..7358 | + | 645 | WP_001144032.1 | ParA family protein | - |
| CO706_RS00170 () | 7445..7753 | + | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| CO706_RS00175 () | 8167..9147 | + | 981 | WP_000688504.1 | plasmid segregation protein ParM | - |
| CO706_RS00180 () | 9140..9556 | + | 417 | WP_001278815.1 | plasmid partitioning/stability family protein | - |
| CO706_RS00190 () | 9558..10831 | - | 1274 | Protein_14 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CO706_RS00195 () | 10831..11208 | - | 378 | WP_000457137.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CO706_RS00200 () | 11210..11335 | + | 126 | Protein_16 | 3'-5' exonuclease | - |
| CO706_RS00205 () | 11340..11906 | + | 567 | WP_032159540.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CO706_RS00210 () | 11913..12092 | - | 180 | WP_001390505.1 | IS91 family transposase ISSbo1 | Transposase |
| CO706_RS00215 () | 12073..12307 | - | 235 | Protein_19 | hypothetical protein | - |
| CO706_RS00230 () | 12755..13513 | + | 759 | WP_000702455.1 | Chaperone protein caf1M | VF |
| CO706_RS00235 () | 13527..16055 | + | 2529 | WP_000858405.1 | F1 capsule-anchoring protein | VF |
| CO706_RS00240 () | 16069..16505 | + | 437 | Protein_22 | Protein AggB | VF |
| CO706_RS00245 () | 16607..17110 | + | 504 | WP_001390509.1 | hypothetical protein | VF |
| CO706_RS00250 () | 17247..17486 | + | 240 | Protein_24 | IS21 family transposase ISSso4 | Transposase |
| CO706_RS00255 () | 17536..17805 | - | 270 | Protein_25 | ISL3 family transposase | - |
| CO706_RS00260 () | 17904..18284 | + | 381 | WP_001401984.1 | IS66 family transposase ISEc8 | Transposase |
| CO706_RS00265 () | 18281..18628 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CO706_RS00270 () | 18678..20216 | + | 1539 | WP_000997981.1 | IS66 family transposase ISEc8 | Transposase |
| CO706_RS00275 () | 20352..20483 | - | 132 | Protein_29 | IS3 family transposase | - |
| CO706_RS00280 () | 20483..20776 | + | 294 | Protein_30 | integrase core domain-containing protein | - |
| CO706_RS00290 () | 21232..21732 | - | 501 | WP_000033204.1 | IS3 family transposase ISEcB1 | Transposase |
| CO706_RS00295 () | 21853..22026 | + | 174 | Protein_32 | integrase core domain-containing protein | - |
| CO706_RS00300 () | 22168..23196 | + | 1029 | WP_000869859.1 | class 1 isoprenoid biosynthesis enzyme | - |
| CO706_RS00305 () | 23200..23739 | + | 540 | WP_001387337.1 | isopentenyl-diphosphate Delta-isomerase | - |
| CO706_RS29665 () | 24242..24394 | - | 153 | WP_000565591.1 | hypothetical protein | - |
| CO706_RS00310 () | 24554..25534 | + | 981 | WP_000019427.1 | IS5 family transposase ISKpn26 | Transposase |
| CO706_RS00315 () | 25717..26720 | + | 1004 | Protein_37 | IS110 family transposase ISPlu13 | Transposase |
| CO706_RS00320 () | 26996..27184 | - | 189 | Protein_38 | IS1 family transposase ISEc30 | Transposase |
| CO706_RS00325 () | 27185..27367 | - | 183 | Protein_39 | IS1 family transposase ISEc30 | Transposase |
| CO706_RS00330 () | 27468..28265 | - | 798 | WP_000769457.1 | CFA/I fimbrial subunit D | VF |
| CO706_RS00335 () | 28481..28803 | - | 323 | Protein_41 | IS3 family transposase | - |
| CO706_RS00340 () | 28793..28993 | + | 201 | Protein_42 | IS3 family transposase | - |
| CO706_RS00345 () | 28999..29738 | + | 740 | Protein_43 | IS3 family transposase IS1203 | Transposase |
| CO706_RS00355 () | 30396..30551 | + | 156 | WP_000587091.1 | hypothetical protein | - |
| CO706_RS00360 () | 30718..31830 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CO706_RS00365 () | 31887..33269 | + | 1383 | Protein_46 | group II intron reverse transcriptase/maturase | - |
| CO706_RS00370 () | 33353..33832 | + | 480 | Protein_47 | IS3 family transposase IS629 | Transposase |
| CO706_RS29065 () | 34036..34386 | - | 351 | WP_000721276.1 | hypothetical protein | VF |
| CO706_RS00380 () | 34743..35723 | + | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| CO706_RS00385 () | 35895..36210 | + | 316 | Protein_50 | hypothetical protein | - |
| CO706_RS00390 () | 36316..36516 | + | 201 | WP_000643555.1 | AggR-activated transcriptional regulator Aar | - |
| CO706_RS00395 () | 36734..37727 | + | 994 | Protein_52 | IS630 family transposase | - |
| CO706_RS29670 () | 38038..39769 | + | 1732 | Protein_53 | Serine protease SepA autotransporter | VF |
| CO706_RS00410 () | 39804..40040 | - | 237 | WP_000239755.1 | IS66 family transposase IS682 | Transposase |
| CO706_RS29070 () | 40261..40431 | - | 171 | Protein_55 | IS3 family transposase | - |
| CO706_RS00420 () | 40811..41941 | + | 1131 | WP_000209219.1 | dispersin export ABC transporter permease subunit AatP | - |
| CO706_RS00425 () | 41938..43176 | + | 1239 | WP_001216021.1 | dispersin export ABC transporter outer membrane protein AatA | - |
| CO706_RS00430 () | 43073..43894 | + | 822 | WP_000810824.1 | dispersin export-associated protein AatB | - |
| CO706_RS00435 () | 43887..44516 | + | 630 | WP_000621743.1 | dispersin export ABC transporter ATP-binding protein AatC | - |
| CO706_RS00440 () | 44533..45744 | + | 1212 | WP_000673201.1 | dispersin export-associated protein AatD | - |
| CO706_RS00445 () | 46719..47852 | + | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| CO706_RS00450 () | 48106..49529 | - | 1424 | Protein_62 | IS66 family transposase ISEc43 | Transposase |
| CO706_RS00455 () | 49560..49910 | - | 351 | WP_000624736.1 | IS66 family transposase ISEc47 | Transposase |
| CO706_RS00460 () | 49907..50341 | - | 435 | WP_001387845.1 | IS66 family transposase ISEc43 | Transposase |
| CO706_RS00465 () | 50452..50640 | + | 189 | Protein_65 | IS66 family transposase IS682 | Transposase |
| CO706_RS00470 () | 50935..55029 | - | 4095 | WP_001034126.1 | Serine protease SepA autotransporter | VF |
| CO706_RS00475 () | 55338..55976 | - | 639 | Protein_67 | recombinase family protein | - |
| CO706_RS00480 () | 56106..56394 | + | 289 | Protein_68 | DUF4158 domain-containing protein | - |
| CO706_RS00485 () | 56603..57403 | + | 801 | WP_001234427.1 | DUF945 domain-containing protein | - |
| CO706_RS00490 () | 57721..58368 | - | 648 | WP_000614287.1 | hypothetical protein | VF |
| CO706_RS00495 () | 58654..59037 | + | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| CO706_RS00500 () | 59231..59689 | + | 459 | Protein_72 | PAS domain-containing protein | - |
| CO706_RS00505 () | 59695..60381 | - | 687 | Protein_73 | IS1 family transposase | - |
| CO706_RS00515 () | 60443..65108 | + | 4666 | Protein_74 | Multifunctional conjugation protein TraI | Relaxase |
| CO706_RS00525 () | 65128..65874 | + | 747 | WP_000205736.1 | conjugal transfer pilus acetylase TraX | - |
| CO706_RS00530 () | 65929..66489 | + | 561 | WP_000139330.1 | fertility inhibition protein FinO | - |
| CO706_RS00535 () | 66718..67152 | + | 435 | WP_001387845.1 | IS66 family transposase ISEc43 | Transposase |
| CO706_RS00540 () | 67149..67445 | + | 297 | WP_000624689.1 | IS66 family transposase ISEc47 | Transposase |
| CO706_RS00545 () | 67426..67704 | + | 279 | Protein_79 | transposase domain-containing protein | - |
| CO706_RS00550 () | 67758..69329 | - | 1572 | WP_000381397.1 | IS66 family transposase ISCro1 | Transposase |
| CO706_RS00555 () | 69349..69696 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CO706_RS00560 () | 69696..70373 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CO706_RS00565 () | 70438..70650 | + | 213 | Protein_83 | ANR family transcriptional regulator | - |
| CO706_RS00580 () | 71101..72081 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| CO706_RS00585 () | 72362..72616 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| CO706_RS29955 () | 72723..72857 | + | 135 | Protein_86 | protein CopA/IncA | - |
| CO706_RS00595 () | 72854..72928 | + | 75 | WP_014966221.1 | RepA leader peptide Tap | - |
| CO706_RS00600 () | 72921..73749 | + | 829 | Protein_88 | incFII family plasmid replication initiator RepA | - |
| CO706_RS00615 () | 74657..74941 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | - |
| CO706_RS00620 () | 74941..75216 | + | 276 | WP_000421273.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CO706_RS00625 () | 75222..75553 | + | 332 | Protein_91 | type II toxin-antitoxin system ParD family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|