MGE detailed information
MGE type: Conjugative plasmid MGE length: 140963 bp
Accession: NZ_CP023440 Location: 1..140963 Organism: Thauera sp. K11 Replicon: plasmid pTX1
Accession: NZ_CP023440 Location: 1..140963 Organism: Thauera sp. K11 Replicon: plasmid pTX1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCZ27_RS22470 () | 1..1071 | + | 1071 | WP_096452941.1 | tyrosine-type recombinase/integrase | - |
| CCZ27_RS22475 () | 1707..2486 | - | 780 | WP_096452943.1 | hypothetical protein | - |
| CCZ27_RS22480 () | 2540..2812 | - | 273 | WP_096452945.1 | hypothetical protein | - |
| CCZ27_RS22485 () | 2809..3129 | - | 321 | WP_096452947.1 | helix-turn-helix domain-containing protein | - |
| CCZ27_RS22490 () | 3126..3875 | - | 750 | WP_096452949.1 | hypothetical protein | - |
| CCZ27_RS22495 () | 4523..5155 | - | 633 | WP_096448561.1 | tyrosine-type recombinase/integrase | - |
| CCZ27_RS22500 () | 5301..6197 | - | 897 | WP_096448559.1 | HTH-type transcriptional regulator DmlR | VF |
| CCZ27_RS22505 () | 6302..7372 | + | 1071 | WP_096452501.1 | alkene reductase | - |
| CCZ27_RS22515 () | 7438..7638 | - | 201 | WP_003159550.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CCZ27_RS22520 () | 7821..10736 | - | 2916 | WP_003049965.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| CCZ27_RS22525 () | 10876..11208 | + | 333 | Protein_10 | MerR family DNA-binding protein | - |
| CCZ27_RS22530 () | 11253..12053 | + | 801 | WP_096448556.1 | pirin family protein | - |
| CCZ27_RS22535 () | 12123..12707 | + | 585 | WP_096448554.1 | isochorismatase family protein | - |
| CCZ27_RS22540 () | 12735..13340 | + | 606 | WP_096448552.1 | antibiotic biosynthesis monooxygenase | - |
| CCZ27_RS22550 () | 16617..17501 | - | 885 | Protein_14 | DUF1738 domain-containing protein | - |
| CCZ27_RS22555 () | 17557..17703 | - | 147 | Protein_15 | conjugal transfer protein TraD | - |
| CCZ27_RS22560 () | 17893..18429 | - | 537 | WP_096452951.1 | conjugative transfer signal peptidase TraF | - |
| CCZ27_RS22565 () | 18477..20381 | - | 1905 | WP_096452953.1 | Conjugal transfer protein TraG | VF |
| CCZ27_RS22570 () | 20378..22711 | - | 2334 | WP_096452955.1 | Protein TraI | Relaxase |
| CCZ27_RS22575 () | 22730..23191 | - | 462 | WP_096452957.1 | conjugal transfer transcriptional regulator TraJ | - |
| CCZ27_RS22580 () | 23585..23962 | + | 378 | WP_096452959.1 | TraK family protein | - |
| CCZ27_RS22585 () | 23962..24687 | + | 726 | WP_096452961.1 | conjugal transfer protein TraL | - |
| CCZ27_RS22590 () | 24684..25121 | + | 438 | WP_096452963.1 | conjugal transfer protein TraM | - |
| CCZ27_RS22595 () | 25569..25922 | - | 354 | WP_096452965.1 | conjugal transfer protein TraO | - |
| CCZ27_RS22600 () | 26316..26885 | - | 570 | WP_096452967.1 | DNA repair protein RadC | - |
| CCZ27_RS22605 () | 27681..28217 | + | 537 | WP_096452969.1 | phasin family protein | - |
| CCZ27_RS22610 () | 28355..28645 | - | 291 | WP_157748692.1 | hypothetical protein | - |
| CCZ27_RS23825 () | 29005..29433 | + | 429 | WP_157748693.1 | SUMF1/EgtB/PvdO family nonheme iron enzyme | - |
| CCZ27_RS22615 () | 29518..29790 | + | 273 | WP_096452973.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| CCZ27_RS22620 () | 29778..30071 | + | 294 | WP_096452975.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCZ27_RS22625 () | 30177..31784 | + | 1608 | WP_096452977.1 | type I restriction-modification system subunit M | - |
| CCZ27_RS23830 () | 31781..32056 | + | 276 | WP_157748694.1 | hypothetical protein | - |
| CCZ27_RS22630 () | 32185..32937 | - | 753 | WP_096452979.1 | IS21 family transposase ISBmu3 | Transposase |
| CCZ27_RS22635 () | 32934..34475 | - | 1542 | WP_096452981.1 | IS21 family transposase ISPpu7 | Transposase |
| CCZ27_RS22645 () | 35200..35850 | + | 651 | WP_002943440.1 | hypothetical protein | - |
| CCZ27_RS22650 () | 36276..37691 | - | 1416 | WP_096452983.1 | ISL3 family transposase ISPst9 | Transposase |
| CCZ27_RS23835 () | 37694..38059 | - | 366 | WP_157748695.1 | hypothetical protein | - |
| CCZ27_RS22655 () | 38062..38256 | - | 195 | WP_096452985.1 | hypothetical protein | - |
| CCZ27_RS22660 () | 38253..38573 | - | 321 | WP_096452987.1 | hypothetical protein | - |
| CCZ27_RS22665 () | 38570..38914 | - | 345 | WP_157748696.1 | hypothetical protein | - |
| CCZ27_RS22670 () | 38904..39164 | - | 261 | WP_157748697.1 | hypothetical protein | - |
| CCZ27_RS22675 () | 39157..39723 | - | 567 | WP_096452993.1 | DUF551 domain-containing protein | - |
| CCZ27_RS22680 () | 39726..40526 | - | 801 | WP_096453144.1 | Fic family protein | - |
| CCZ27_RS22685 () | 40705..41742 | + | 1038 | WP_096452995.1 | IS5 family transposase ISAzo11 | Transposase |
| CCZ27_RS22690 () | 41876..42241 | - | 366 | WP_096452997.1 | substrate-binding domain-containing protein | - |
| CCZ27_RS22695 () | 43036..44055 | + | 1020 | WP_157748698.1 | GGDEF domain-containing protein | - |
| CCZ27_RS22700 () | 44074..46026 | + | 1953 | WP_096453001.1 | Diguanylate cyclase DosC | VF |
| CCZ27_RS22705 () | 46318..47115 | + | 798 | WP_096453003.1 | flagellar brake protein | - |
| CCZ27_RS22710 () | 47942..48943 | + | 1002 | WP_096453005.1 | restriction endonuclease subunit S | - |
| CCZ27_RS22715 () | 48956..51798 | + | 2843 | Protein_49 | type I restriction endonuclease subunit R | - |
| CCZ27_RS22720 () | 52125..52421 | + | 297 | WP_096453007.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCZ27_RS22725 () | 52437..53555 | + | 1119 | WP_096453009.1 | HigA family addiction module antidote protein | - |
| CCZ27_RS22730 () | 53571..53793 | + | 223 | Protein_52 | hypothetical protein | - |
| CCZ27_RS22735 () | 53840..55099 | + | 1260 | WP_096453011.1 | hypothetical protein | - |
| CCZ27_RS22740 () | 55547..58270 | - | 2724 | WP_157748699.1 | DUF4062 domain-containing protein | - |
| CCZ27_RS23840 () | 58406..58672 | - | 267 | WP_157748700.1 | hypothetical protein | - |
| CCZ27_RS22745 () | 58797..59882 | - | 1086 | WP_096453015.1 | IS5 family transposase ISPst12 | Transposase |
| CCZ27_RS22750 () | 60075..61025 | + | 951 | WP_096453017.1 | restriction endonuclease | - |
| CCZ27_RS23845 () | 61406..61561 | + | 156 | WP_157748701.1 | hypothetical protein | - |
| CCZ27_RS22755 () | 61573..62277 | + | 705 | WP_096453019.1 | PEP-CTERM sorting domain-containing protein | - |
| CCZ27_RS22760 () | 63043..63633 | - | 591 | WP_096453146.1 | cyclin-dependent kinase inhibitor 3 family protein | - |
| CCZ27_RS22765 () | 63706..64095 | + | 390 | WP_096453021.1 | IS66 family transposase ISPre3 | Transposase |
| CCZ27_RS22770 () | 64092..64436 | + | 345 | WP_096453023.1 | IS66 family transposase ISPre3 | Transposase |
| CCZ27_RS22775 () | 64493..66013 | + | 1521 | WP_096453025.1 | IS66 family transposase ISPre3 | Transposase |
| CCZ27_RS22780 () | 66013..66270 | + | 258 | WP_096453027.1 | hypothetical protein | - |
| CCZ27_RS22785 () | 66359..66547 | - | 189 | WP_198363387.1 | hypothetical protein | - |
| CCZ27_RS23850 () | 66579..66800 | - | 222 | WP_157748702.1 | hypothetical protein | - |
| CCZ27_RS22790 () | 66843..67736 | - | 894 | WP_096453029.1 | DNA-binding protein | - |
| CCZ27_RS22795 () | 67952..68620 | - | 669 | WP_096453031.1 | SOS response-associated peptidase | - |
| CCZ27_RS22800 () | 68709..69041 | + | 333 | WP_096453033.1 | hypothetical protein | - |
| CCZ27_RS22805 () | 69045..69266 | - | 222 | Protein_70 | hypothetical protein | - |
| CCZ27_RS22815 () | 70094..70237 | - | 144 | WP_198363388.1 | hypothetical protein | - |
| CCZ27_RS22820 () | 70452..70946 | + | 495 | WP_096453037.1 | H-NS histone family protein | - |
| CCZ27_RS22825 () | 71171..71719 | - | 549 | WP_096453038.1 | TIGR02281 family clan AA aspartic protease | - |
| CCZ27_RS22830 () | 71985..72221 | + | 237 | WP_096453148.1 | AbrB family transcriptional regulator | Antitoxin Detail |
| CCZ27_RS22835 () | 72221..72637 | + | 417 | WP_096453040.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CCZ27_RS22840 () | 73120..73737 | + | 618 | WP_096453042.1 | DNA-binding protein | - |
| CCZ27_RS22845 () | 73968..74363 | - | 396 | WP_096453044.1 | type II toxin-antitoxin system VapC family toxin | - |
| CCZ27_RS22850 () | 74360..74611 | - | 252 | WP_096453046.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| CCZ27_RS22855 () | 74788..77754 | - | 2967 | WP_096453049.1 | Tn3 family transposase TnpA_TnShfr1 | Transposase |
| CCZ27_RS22860 () | 77757..78314 | - | 558 | WP_034928705.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| CCZ27_RS22865 () | 78476..79459 | + | 984 | WP_034928702.1 | arsenic resistance protein | - |
| CCZ27_RS22870 () | 79550..80623 | - | 1074 | WP_096453053.1 | Alpha-D-kanosaminyltransferase | VF |
| CCZ27_RS22875 () | 80900..81286 | - | 387 | WP_034928700.1 | hypothetical protein | - |
| CCZ27_RS22880 () | 81377..84538 | - | 3162 | WP_096453055.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| CCZ27_RS22885 () | 84549..84890 | - | 342 | WP_034928697.1 | P-II family nitrogen regulator | - |
| CCZ27_RS22890 () | 84906..86495 | - | 1590 | WP_034928694.1 | efflux RND transporter periplasmic adaptor subunit | - |
| CCZ27_RS22895 () | 86497..87816 | - | 1320 | WP_138677526.1 | TolC family protein | - |
| CCZ27_RS22900 () | 87984..88343 | - | 360 | WP_034928692.1 | hypothetical protein | - |
| CCZ27_RS22905 () | 88413..88745 | - | 333 | WP_034928689.1 | DUF4148 domain-containing protein | - |
| CCZ27_RS22910 () | 88914..89603 | + | 690 | WP_034928687.1 | Transcriptional activator protein CzcR | VF |
| CCZ27_RS22915 () | 89600..90943 | + | 1344 | WP_096453057.1 | heavy metal sensor histidine kinase | - |
| CCZ27_RS22920 () | 91015..93123 | - | 2109 | WP_034928709.1 | heavy metal translocating P-type ATPase | - |
| CCZ27_RS22925 () | 93441..93953 | - | 513 | WP_034928684.1 | hypothetical protein | - |
| CCZ27_RS22930 () | 94072..94542 | + | 471 | WP_043743675.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| CCZ27_RS22935 () | 94618..95016 | + | 399 | WP_034928677.1 | hypothetical protein | - |
| CCZ27_RS22940 () | 95013..95225 | + | 213 | WP_034928676.1 | hypothetical protein | - |
| CCZ27_RS22945 () | 95453..97240 | + | 1788 | WP_096453059.1 | tyrosine-type recombinase/integrase | - |
| CCZ27_RS23855 () | 97535..97684 | - | 150 | WP_153167942.1 | hypothetical protein | - |
| CCZ27_RS22950 () | 98139..99086 | - | 948 | WP_096453061.1 | hypothetical protein | - |
| CCZ27_RS22955 () | 99668..100726 | - | 1059 | WP_096453063.1 | ParB/RepB/Spo0J family partition protein | - |
| CCZ27_RS22960 () | 100729..101805 | - | 1077 | WP_096453065.1 | ParA family protein | - |
| CCZ27_RS24095 () | 102040..102657 | - | 618 | WP_194270374.1 | TetR/AcrR family transcriptional regulator | - |
| CCZ27_RS22970 () | 102791..104929 | + | 2139 | WP_194270375.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CCZ27_RS22975 () | 104953..105240 | - | 288 | WP_096453069.1 | RES family NAD+ phosphorylase | - |
| CCZ27_RS22980 () | 105291..105587 | + | 297 | WP_052484392.1 | IS66 family transposase ISAeh1 | Transposase |
| CCZ27_RS22985 () | 105659..107212 | + | 1554 | WP_198363386.1 | IS66 family transposase ISPpu19 | Transposase |
| CCZ27_RS22990 () | 107212..107721 | + | 510 | WP_096453071.1 | hypothetical protein | - |
| CCZ27_RS22995 () | 108083..109513 | - | 1431 | WP_096453073.1 | IS1182 family transposase ISPa7 | Transposase |
| CCZ27_RS23000 () | 109864..110145 | + | 282 | WP_096453075.1 | hypothetical protein | - |
| CCZ27_RS23005 () | 110854..111882 | - | 1029 | WP_096453152.1 | ParB/RepB/Spo0J family partition protein | - |
| CCZ27_RS23010 () | 112310..112672 | + | 363 | WP_096453077.1 | transcriptional regulator | - |
| CCZ27_RS23015 () | 112972..113931 | + | 960 | WP_096453079.1 | Type IV secretion system protein PtlH | VF |
| CCZ27_RS23020 () | 113945..114391 | + | 447 | WP_096453081.1 | conjugal transfer system pilin TrbC | - |
| CCZ27_RS23025 () | 114393..114704 | + | 312 | WP_096453083.1 | conjugal transfer protein TrbD | - |
| CCZ27_RS23030 () | 114701..117268 | + | 2568 | WP_096453085.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| CCZ27_RS23035 () | 117265..118065 | + | 801 | WP_096453087.1 | conjugal transfer protein TrbF | - |
| CCZ27_RS23040 () | 118082..118978 | + | 897 | WP_096453090.1 | P-type conjugative transfer protein TrbG | - |
| CCZ27_RS23045 () | 118981..119457 | + | 477 | WP_096453092.1 | conjugal transfer protein TrbH | - |
| CCZ27_RS23050 () | 119463..120866 | + | 1404 | WP_096453094.1 | TrbI/VirB10 family protein | - |
| CCZ27_RS23055 () | 120885..121646 | + | 762 | WP_096453096.1 | P-type conjugative transfer protein TrbJ | - |
| CCZ27_RS23060 () | 121661..121891 | + | 231 | WP_096453098.1 | entry exclusion lipoprotein TrbK | - |
| CCZ27_RS23065 () | 121902..123503 | + | 1602 | WP_096453100.1 | P-type conjugative transfer protein TrbL | - |
| CCZ27_RS23070 () | 123615..124193 | + | 579 | WP_096453102.1 | conjugal transfer protein TrbM | - |
| CCZ27_RS23075 () | 124196..124717 | + | 522 | WP_096453104.1 | hypothetical protein | VF |
| CCZ27_RS23080 () | 125092..125817 | - | 726 | WP_096453106.1 | CBASS effector endonuclease NucC | - |
| CCZ27_RS23085 () | 125818..126765 | - | 948 | WP_096453108.1 | AAA family ATPase | - |
| CCZ27_RS23090 () | 126765..127280 | - | 516 | WP_096453154.1 | hypothetical protein | - |
| CCZ27_RS23095 () | 127286..128251 | - | 966 | WP_096453110.1 | nucleotidyltransferase | - |
| CCZ27_RS23100 () | 128451..128774 | + | 324 | WP_096453112.1 | helix-turn-helix domain-containing protein | - |
| CCZ27_RS23105 () | 128771..129640 | + | 870 | WP_096453114.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CCZ27_RS23110 () | 130244..130531 | + | 288 | WP_096453116.1 | transcriptional regulator | - |
| CCZ27_RS23115 () | 130635..131432 | + | 798 | WP_096453118.1 | endonuclease | - |
| CCZ27_RS23120 () | 131437..132438 | - | 1002 | WP_096453120.1 | DNA polymerase III subunit epsilon | - |
| CCZ27_RS23125 () | 132435..133022 | - | 588 | WP_096453122.1 | integration host factor subunit beta | - |
| CCZ27_RS23130 () | 133304..133774 | + | 471 | WP_153167885.1 | hypothetical protein | - |
| CCZ27_RS23860 () | 133810..133959 | - | 150 | WP_157748705.1 | hypothetical protein | - |
| CCZ27_RS23135 () | 134308..134571 | - | 264 | WP_096453126.1 | hypothetical protein | - |
| CCZ27_RS23870 () | 134955..135425 | + | 471 | WP_157748707.1 | hypothetical protein | - |
| CCZ27_RS23140 () | 135431..136294 | + | 864 | WP_096453128.1 | hypothetical protein | - |
| CCZ27_RS23145 () | 136752..137150 | - | 399 | WP_096453130.1 | type II toxin-antitoxin system VapC family toxin | - |
| CCZ27_RS23150 () | 137147..137383 | - | 237 | WP_096453132.1 | ribbon-helix-helix domain-containing protein | - |
| CCZ27_RS23155 () | 137571..137837 | - | 267 | WP_096453134.1 | RHS repeat protein | - |
| CCZ27_RS23160 () | 137955..138236 | + | 282 | WP_096453136.1 | DUF1778 domain-containing protein | - |
| CCZ27_RS23165 () | 138233..138754 | + | 522 | WP_096453138.1 | GNAT family N-acetyltransferase | - |
| CCZ27_RS23170 () | 139179..139418 | + | 240 | WP_096453140.1 | helix-turn-helix domain-containing protein | - |
| CCZ27_RS23175 () | 139421..140749 | + | 1329 | WP_096453142.1 | type II toxin-antitoxin system HipA family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|