MGE detailed information
MGE type: Prophage MGE length: 46896 bp
Accession: NZ_CP023390 Location: 316295..363190 Organism: Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman Replicon: chromosome
Accession: NZ_CP023390 Location: 316295..363190 Organism: Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNH35_RS01455 () | 311606..313138 | - | 1533 | WP_000665736.1 | sodium:solute symporter | - |
| CNH35_RS01460 () | 313178..314059 | - | 882 | WP_001030738.1 | N-acetylneuraminate lyase | - |
| CNH35_RS01465 () | 314217..315077 | + | 861 | WP_000291445.1 | ROK family protein | - |
| CNH35_RS01470 () | 315355..316155 | - | 801 | WP_000667379.1 | MurR/RpiR family transcriptional regulator | - |
| CNH35_RS01475 () | 316295..316963 | + | 669 | WP_000936720.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| CNH35_RS01480 () | 317090..318403 | - | 1314 | WP_001077722.1 | YjiH family protein | - |
| CNH35_RS01485 () | 318821..320752 | + | 1932 | Protein_279 | hypothetical protein | VF |
| CNH35_RS01490 () | 320846..322051 | - | 1206 | WP_000264186.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CNH35_RS01495 () | 322162..322341 | + | 180 | WP_000337827.1 | hypothetical protein | - |
| CNH35_RS01500 () | 322321..323253 | - | 933 | WP_000392183.1 | hypothetical protein | - |
| CNH35_RS01505 () | 323285..323749 | - | 465 | WP_000525007.1 | hypothetical protein | Toxin Detail |
| CNH35_RS01510 () | 323762..324076 | - | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CNH35_RS01515 () | 324228..324464 | + | 237 | WP_001121116.1 | helix-turn-helix domain-containing protein | - |
| CNH35_RS01520 () | 324478..324657 | + | 180 | WP_000438352.1 | hypothetical protein | - |
| CNH35_RS01525 () | 324758..325240 | - | 483 | WP_000394410.1 | hypothetical protein | - |
| CNH35_RS01530 () | 325300..326049 | + | 750 | WP_001148586.1 | phage antirepressor KilAC domain-containing protein | - |
| CNH35_RS01535 () | 326065..326283 | + | 219 | WP_000993180.1 | hypothetical protein | - |
| CNH35_RS01540 () | 326313..326576 | + | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| CNH35_RS01545 () | 326588..326749 | + | 162 | WP_000066021.1 | DUF1270 family protein | - |
| CNH35_RS01550 () | 326841..327101 | + | 261 | WP_000291089.1 | DUF1108 family protein | - |
| CNH35_RS01555 () | 327111..327332 | + | 222 | WP_000815401.1 | DUF2483 family protein | - |
| CNH35_RS01560 () | 327325..328113 | + | 789 | WP_000134097.1 | ATP-binding protein | - |
| CNH35_RS01565 () | 328142..328693 | + | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| CNH35_RS01570 () | 328706..329377 | + | 672 | WP_001199439.1 | hypothetical protein | - |
| CNH35_RS01575 () | 329483..330340 | - | 858 | WP_000371250.1 | DUF4393 domain-containing protein | - |
| CNH35_RS01580 () | 330405..331175 | + | 771 | WP_000190223.1 | conserved phage C-terminal domain-containing protein | - |
| CNH35_RS01585 () | 331185..331964 | + | 780 | WP_000803062.1 | ATP-binding protein | - |
| CNH35_RS01590 () | 331958..332116 | + | 159 | WP_000256597.1 | hypothetical protein | - |
| CNH35_RS01595 () | 332129..332350 | + | 222 | WP_001123684.1 | DUF3269 family protein | - |
| CNH35_RS01600 () | 332360..332767 | + | 408 | WP_000401950.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CNH35_RS01605 () | 332767..332952 | + | 186 | WP_001187264.1 | DUF3113 family protein | - |
| CNH35_RS01610 () | 332953..333312 | + | 360 | WP_000117792.1 | hypothetical protein | - |
| CNH35_RS01615 () | 333312..333566 | + | 255 | WP_000022735.1 | DUF3310 domain-containing protein | - |
| CNH35_RS01620 () | 333566..333814 | + | 249 | WP_012068339.1 | hypothetical protein | - |
| CNH35_RS01625 () | 333829..334230 | + | 402 | WP_000695747.1 | hypothetical protein | - |
| CNH35_RS01635 () | 334418..334867 | + | 450 | WP_000982708.1 | hypothetical protein | - |
| CNH35_RS01640 () | 334864..335148 | + | 285 | WP_001105621.1 | hypothetical protein | - |
| CNH35_RS01645 () | 335141..335389 | + | 249 | WP_001065083.1 | DUF1024 family protein | - |
| CNH35_RS01650 () | 335382..335918 | + | 537 | WP_000185669.1 | dUTP diphosphatase | - |
| CNH35_RS01655 () | 335955..336161 | + | 207 | WP_000195799.1 | DUF1381 domain-containing protein | - |
| CNH35_RS01660 () | 336158..336352 | + | 195 | WP_000132919.1 | hypothetical protein | - |
| CNH35_RS01665 () | 336349..336552 | + | 204 | WP_001072795.1 | hypothetical protein | - |
| CNH35_RS01670 () | 336545..336781 | + | 237 | WP_000608279.1 | hypothetical protein | - |
| CNH35_RS01675 () | 336771..337160 | + | 390 | WP_001580341.1 | hypothetical protein | - |
| CNH35_RS01680 () | 337157..337330 | + | 174 | WP_000595257.1 | transcriptional activator RinB | - |
| CNH35_RS01685 () | 337331..337732 | + | 402 | WP_000286968.1 | hypothetical protein | - |
| CNH35_RS01690 () | 338083..338577 | + | 495 | WP_000594088.1 | terminase small subunit | - |
| CNH35_RS01695 () | 338570..339793 | + | 1224 | WP_001037578.1 | PBSX family phage terminase large subunit | - |
| CNH35_RS01700 () | 339790..341214 | + | 1425 | WP_000177430.1 | phage portal protein | - |
| CNH35_RS01705 () | 341183..342136 | + | 954 | WP_000184135.1 | phage head morphogenesis protein | - |
| CNH35_RS01710 () | 342138..342344 | + | 207 | WP_000346033.1 | hypothetical protein | - |
| CNH35_RS01715 () | 342447..343031 | + | 585 | WP_001019219.1 | DUF4355 domain-containing protein | - |
| CNH35_RS01720 () | 343048..343962 | + | 915 | WP_000235168.1 | phage major capsid protein | - |
| CNH35_RS15335 () | 343974..344117 | + | 144 | WP_000002929.1 | hypothetical protein | - |
| CNH35_RS01725 () | 344123..344473 | + | 351 | WP_000177352.1 | hypothetical protein | - |
| CNH35_RS01730 () | 344485..344820 | + | 336 | WP_000483040.1 | phage head closure protein | - |
| CNH35_RS01735 () | 344807..345220 | + | 414 | WP_001151330.1 | HK97 gp10 family phage protein | - |
| CNH35_RS01740 () | 345233..345658 | + | 426 | WP_000270192.1 | DUF3168 domain-containing protein | - |
| CNH35_RS01745 () | 345659..346216 | + | 558 | WP_000057582.1 | tail protein | - |
| CNH35_RS01750 () | 346283..346789 | + | 507 | WP_000134337.1 | hypothetical protein | - |
| CNH35_RS01755 () | 346834..347118 | + | 285 | WP_000880587.1 | hypothetical protein | - |
| CNH35_RS01760 () | 347122..350265 | + | 3144 | WP_000379457.1 | terminase | - |
| CNH35_RS01765 () | 350280..351221 | + | 942 | WP_000560181.1 | phage tail family protein | - |
| CNH35_RS01770 () | 351232..353118 | + | 1887 | WP_001122001.1 | phage tail protein | - |
| CNH35_RS01775 () | 353131..355029 | + | 1899 | WP_000323259.1 | hypothetical protein | - |
| CNH35_RS01780 () | 355029..356852 | + | 1824 | WP_000634521.1 | phage baseplate upper protein | - |
| CNH35_RS01785 () | 356852..357229 | + | 378 | WP_000705895.1 | DUF2977 domain-containing protein | - |
| CNH35_RS01790 () | 357233..357406 | + | 174 | WP_000782200.1 | XkdX family protein | - |
| CNH35_RS01795 () | 357446..357745 | + | 300 | WP_000466778.1 | DUF2951 domain-containing protein | - |
| CNH35_RS01800 () | 357882..359780 | + | 1899 | WP_000524021.1 | hypothetical protein | VF |
| CNH35_RS01805 () | 359793..360965 | + | 1173 | WP_000276627.1 | BppU family phage baseplate upper protein | - |
| CNH35_RS01810 () | 360971..361366 | + | 396 | WP_000398878.1 | hypothetical protein | - |
| CNH35_RS01815 () | 361422..361724 | + | 303 | WP_000339146.1 | phage holin | - |
| CNH35_RS01820 () | 361736..363190 | + | 1455 | WP_000930256.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CNH35_RS01835 () | 364324..365151 | - | 828 | WP_000136020.1 | alpha/beta hydrolase | - |
| CNH35_RS01840 () | 365224..366423 | - | 1200 | WP_000286484.1 | NADH-dependent flavin oxidoreductase | - |
| CNH35_RS01845 () | 366519..366611 | + | 93 | WP_001801779.1 | hypothetical protein | - |
| CNH35_RS01850 () | 366725..367726 | + | 1002 | WP_000240058.1 | LLM class flavin-dependent oxidoreductase | - |
| CNH35_RS01855 () | 367760..368092 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA4244 | NC_009641 | 320846..363190 | 0.002 |