MGE detailed information
MGE type: Genomic_island MGE length: 9287 bp
Accession: NZ_CP023377 Location: 4272358..4281644 Organism: Escherichia coli strain 127 Replicon: chromosome
Accession: NZ_CP023377 Location: 4272358..4281644 Organism: Escherichia coli strain 127 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ50_RS22855 () | 4267553..4267891 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| CNQ50_RS22860 () | 4267867..4269564 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| CNQ50_RS22865 () | 4269601..4270176 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| CNQ50_RS22880 () | 4270975..4272513 | + | 1539 | Protein_4181 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CNQ50_RS22885 () | 4272878..4274212 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CNQ50_RS22890 () | 4274292..4276439 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CNQ50_RS22895 () | 4276498..4277955 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| CNQ50_RS22900 () | 4278192..4279709 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CNQ50_RS22905 () | 4279881..4281109 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| CNQ50_RS22910 () | 4281147..4281320 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CNQ50_RS22915 () | 4281348..4281644 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CNQ50_RS22925 () | 4281871..4282143 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CNQ50_RS22930 () | 4282155..4282385 | - | 231 | WP_024250366.1 | (4Fe-4S)-binding protein | - |
| CNQ50_RS22935 () | 4282566..4284197 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| CNQ50_RS22940 () | 4284194..4284913 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.009 |