MGE detailed information
MGE type: Conjugative plasmid MGE length: 96402 bp
Accession: NZ_CP023370 Location: 1..96402 Organism: Escherichia coli strain 1428 Replicon: plasmid p96
Accession: NZ_CP023370 Location: 1..96402 Organism: Escherichia coli strain 1428 Replicon: plasmid p96
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ52_RS26945 () | 1..981 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CNQ52_RS26950 () | 974..1390 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CNQ52_RS26955 () | 1392..2666 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| CNQ52_RS26960 () | 2666..3103 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CNQ52_RS26965 () | 3100..3348 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CNQ52_RS26975 () | 3766..4668 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| CNQ52_RS26980 () | 4665..4976 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| CNQ52_RS26985 () | 5074..5757 | + | 684 | WP_000086178.1 | DNA methylase | - |
| CNQ52_RS26990 () | 5758..5980 | + | 223 | Protein_8 | hypothetical protein | - |
| CNQ52_RS26995 () | 5991..6428 | + | 438 | Protein_9 | DUF1380 domain-containing protein | - |
| CNQ52_RS28090 () | 6479..7251 | + | 773 | Protein_10 | hypothetical protein | - |
| CNQ52_RS27010 () | 7794..8089 | + | 296 | Protein_11 | antirestriction protein | - |
| CNQ52_RS27015 () | 8146..8569 | + | 424 | Protein_12 | DUF1380 family protein | - |
| CNQ52_RS27020 () | 8566..8757 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| CNQ52_RS28095 () | 9090..9158 | - | 69 | Protein_14 | pilus protein | - |
| CNQ52_RS27030 () | 9527..10053 | + | 527 | Protein_15 | single-stranded DNA-binding protein | - |
| CNQ52_RS27035 () | 10111..10344 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| CNQ52_RS27040 () | 10403..12365 | + | 1963 | Protein_17 | ParB/RepB/Spo0J family partition protein | - |
| CNQ52_RS27045 () | 12420..12854 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| CNQ52_RS27050 () | 12851..13570 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| CNQ52_RS27055 () | 13567..14163 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| CNQ52_RS27065 () | 14626..15126 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| CNQ52_RS27080 () | 15855..16289 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CNQ52_RS27085 () | 16381..16647 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CNQ52_RS27090 () | 16712..17653 | + | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| CNQ52_RS28100 () | 17715..17885 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| CNQ52_RS27095 () | 17916..18167 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CNQ52_RS28105 () | 18201..18398 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| CNQ52_RS27110 () | 18747..19595 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| CNQ52_RS27115 () | 19680..20015 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| CNQ52_RS27120 () | 20249..20581 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CNQ52_RS27125 () | 20592..23291 | + | 2700 | WP_047666698.1 | Protein TraI | Relaxase |
| CNQ52_RS27130 () | 23328..25619 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| CNQ52_RS27135 () | 25612..26682 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| CNQ52_RS27140 () | 26701..27909 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 28089..28146 | - | 58 | NuclAT_1 | - | - |
| - () | 28089..28146 | - | 58 | NuclAT_1 | - | - |
| - () | 28089..28146 | - | 58 | NuclAT_1 | - | - |
| - () | 28089..28146 | - | 58 | NuclAT_1 | - | - |
| CNQ52_RS27145 () | 28216..28965 | - | 750 | Protein_35 | protein finQ | - |
| CNQ52_RS27150 () | 29194..29511 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CNQ52_RS27155 () | 29508..30041 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| CNQ52_RS27160 () | 30135..31280 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| - () | 31629..31689 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 31629..31689 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 31629..31689 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 31629..31689 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| CNQ52_RS27165 () | 31741..31893 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| CNQ52_RS27170 () | 31965..32216 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CNQ52_RS27175 () | 32516..32812 | + | 297 | WP_011264046.1 | hypothetical protein | - |
| CNQ52_RS28110 () | 32877..33053 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| CNQ52_RS27180 () | 33445..33654 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CNQ52_RS27185 () | 33726..34388 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CNQ52_RS27190 () | 34459..36627 | - | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| CNQ52_RS27195 () | 36724..37308 | - | 585 | WP_001746157.1 | IncI1-type conjugal transfer protein TraX | - |
| CNQ52_RS27200 () | 37337..38539 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| CNQ52_RS27205 () | 38506..39120 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| CNQ52_RS27210 () | 39120..42164 | - | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| CNQ52_RS27215 () | 42254..43054 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CNQ52_RS27220 () | 43038..43226 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CNQ52_RS27225 () | 43290..43694 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| CNQ52_RS27230 () | 43745..44272 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CNQ52_RS27235 () | 44272..44976 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| CNQ52_RS27240 () | 44976..46265 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| CNQ52_RS27245 () | 46268..47251 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| CNQ52_RS27250 () | 47262..47954 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CNQ52_RS27255 () | 47951..48298 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CNQ52_RS27260 () | 48316..52083 | - | 3768 | WP_023518849.1 | SogL | - |
| CNQ52_RS27265 () | 52173..52724 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| CNQ52_RS27270 () | 52739..53029 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CNQ52_RS27275 () | 53026..54174 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CNQ52_RS27280 () | 54171..54989 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| CNQ52_RS27285 () | 54986..55444 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CNQ52_RS27290 () | 55839..56423 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CNQ52_RS27295 () | 56483..57685 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| CNQ52_RS27300 () | 57771..58595 | - | 825 | WP_023518851.1 | hypothetical protein | - |
| CNQ52_RS27305 () | 58746..59900 | - | 1155 | WP_001139958.1 | integrase | - |
| CNQ52_RS27340 () | 61421..61669 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| CNQ52_RS27345 () | 61666..62958 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| CNQ52_RS27350 () | 62958..63614 | - | 657 | WP_096040797.1 | hypothetical protein | VF |
| CNQ52_RS27355 () | 63599..64159 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| CNQ52_RS27360 () | 64169..64783 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| CNQ52_RS27365 () | 64801..65898 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CNQ52_RS27370 () | 65911..67464 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CNQ52_RS27375 () | 67475..67927 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| CNQ52_RS27380 () | 67914..69209 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| CNQ52_RS27385 () | 69202..70884 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CNQ52_RS27390 () | 70898..71335 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| CNQ52_RS27395 () | 71335..72402 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| CNQ52_RS27405 () | 73076..73528 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| CNQ52_RS27410 () | 73571..73825 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| CNQ52_RS27415 () | 74093..74659 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| CNQ52_RS27420 () | 74673..75356 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| CNQ52_RS27430 () | 75610..76143 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| CNQ52_RS27440 () | 76585..76872 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CNQ52_RS27445 () | 76790..77053 | - | 264 | WP_001324596.1 | ash family protein | - |
| CNQ52_RS27460 () | 78026..79057 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| CNQ52_RS27475 () | 79966..80235 | + | 270 | WP_000079928.1 | hypothetical protein | - |
| CNQ52_RS27480 () | 80232..80513 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CNQ52_RS27485 () | 80553..81401 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| CNQ52_RS27490 () | 81518..81991 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| CNQ52_RS27505 () | 82734..83228 | - | 495 | WP_023278058.1 | hypothetical protein | - |
| CNQ52_RS27510 () | 83284..83886 | - | 603 | WP_000517689.1 | hypothetical protein | - |
| CNQ52_RS27520 () | 84240..85586 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| CNQ52_RS27525 () | 85866..87748 | + | 1883 | Protein_96 | colicin | - |
| CNQ52_RS27535 () | 88234..88581 | + | 348 | Protein_97 | hypothetical protein | - |
| CNQ52_RS27540 () | 88601..89191 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| CNQ52_RS27545 () | 89191..89448 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| CNQ52_RS27550 () | 89799..90800 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| CNQ52_RS27555 () | 90976..91320 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| CNQ52_RS27560 () | 91819..92073 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| CNQ52_RS27565 () | 92118..93044 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| CNQ52_RS27570 () | 93576..93989 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| CNQ52_RS27575 () | 93991..94770 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| CNQ52_RS27580 () | 94950..95594 | + | 645 | WP_001144036.1 | ParA family protein | - |
| CNQ52_RS27585 () | 95681..95989 | + | 309 | WP_000030199.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|