MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80602 bp
Accession: NZ_CP023361 Location: 1..80602 Organism: Escherichia coli strain 1943 Replicon: plasmid p80
Accession: NZ_CP023361 Location: 1..80602 Organism: Escherichia coli strain 1943 Replicon: plasmid p80
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ54_RS24740 () | 1..756 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| CNQ54_RS24745 () | 1344..2510 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| CNQ54_RS24750 () | 2510..3481 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CNQ54_RS24765 () | 4348..5250 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| CNQ54_RS24770 () | 5254..5558 | + | 305 | Protein_4 | hypothetical protein | - |
| CNQ54_RS24775 () | 5635..6087 | + | 453 | Protein_5 | DNA methylase | - |
| CNQ54_RS26115 () | 6083..6173 | + | 91 | Protein_6 | conjugal transfer protein TraB | - |
| CNQ54_RS24780 () | 6221..7831 | + | 1611 | Protein_7 | conjugal transfer mating pair stabilization protein TraG | - |
| CNQ54_RS24785 () | 7815..9542 | + | 1728 | WP_134051828.1 | type IV conjugative transfer system coupling protein TraD | - |
| CNQ54_RS24790 () | 9542..12793 | + | 3252 | Protein_9 | Multifunctional conjugation protein TraI | Relaxase |
| CNQ54_RS24795 () | 12789..13151 | + | 363 | Protein_10 | fertility inhibition protein FinO | - |
| CNQ54_RS24800 () | 13282..13494 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| CNQ54_RS26270 () | 14470..14610 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| CNQ54_RS24820 () | 14708..15361 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| CNQ54_RS26120 () | 15454..15711 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CNQ54_RS24825 () | 15644..16045 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CNQ54_RS24830 () | 16330..17655 | + | 1326 | WP_023141679.1 | DUF262 domain-containing protein | - |
| CNQ54_RS24835 () | 17692..18396 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CNQ54_RS24845 () | 18546..18704 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| CNQ54_RS24850 () | 18694..19200 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| CNQ54_RS24855 () | 19383..20198 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| CNQ54_RS24865 () | 20545..22431 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| CNQ54_RS24870 () | 22472..22999 | + | 528 | WP_000178050.1 | iron transporter | - |
| CNQ54_RS24875 () | 23103..24482 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| CNQ54_RS24880 () | 24485..25768 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| CNQ54_RS24885 () | 25758..26888 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| CNQ54_RS24890 () | 26893..27588 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CNQ54_RS24895 () | 27575..28060 | + | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| CNQ54_RS24900 () | 28085..28570 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| CNQ54_RS24905 () | 28692..29222 | + | 531 | Protein_29 | histidine-type phosphatase | - |
| CNQ54_RS24910 () | 29280..29984 | - | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| CNQ54_RS24915 () | 30009..31205 | + | 1197 | Protein_31 | IS3 family transposase | - |
| CNQ54_RS24920 () | 31227..31460 | + | 234 | Protein_32 | Tn3 family transposase ISPsy39 | Transposase |
| CNQ54_RS24925 () | 31537..31845 | + | 309 | Protein_33 | IS4 family transposase ISEc13 | Transposase |
| CNQ54_RS24930 () | 31904..33214 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| CNQ54_RS24935 () | 33207..34280 | - | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| CNQ54_RS24940 () | 34286..35110 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| CNQ54_RS24945 () | 35121..36008 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| CNQ54_RS24950 () | 35998..36876 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| CNQ54_RS24955 () | 37007..37447 | - | 441 | Protein_39 | zinc-binding dehydrogenase | - |
| CNQ54_RS24965 () | 37848..38738 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| CNQ54_RS24970 () | 38763..39143 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| CNQ54_RS24975 () | 39176..40141 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| CNQ54_RS24980 () | 40187..40939 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| CNQ54_RS24985 () | 41544..41828 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CNQ54_RS24990 () | 41828..42103 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CNQ54_RS24995 () | 42209..42502 | + | 294 | WP_001105060.1 | hypothetical protein | - |
| CNQ54_RS25000 () | 42537..42665 | - | 129 | Protein_47 | IS481 family transposase | - |
| CNQ54_RS25005 () | 42698..43867 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| CNQ54_RS25015 () | 44360..44667 | + | 308 | Protein_49 | type II toxin-antitoxin system ParD family antitoxin | - |
| CNQ54_RS25025 () | 45010..45192 | + | 183 | WP_042344623.1 | hypothetical protein | - |
| CNQ54_RS25030 () | 45313..46053 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| CNQ54_RS25035 () | 46338..47315 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| CNQ54_RS25045 () | 48061..48384 | + | 324 | Protein_53 | IS21 family transposase IS21 | Transposase |
| CNQ54_RS26275 () | 48386..48490 | + | 105 | Protein_54 | AAA family ATPase | - |
| CNQ54_RS25055 () | 48551..49064 | + | 514 | Protein_55 | DUF4113 domain-containing protein | - |
| CNQ54_RS25060 () | 49244..49941 | - | 698 | Protein_56 | IS1 family transposase IS1A | Transposase |
| CNQ54_RS25075 () | 50297..51211 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| CNQ54_RS25080 () | 51211..52038 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| CNQ54_RS25085 () | 52035..52892 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| CNQ54_RS25090 () | 52889..53746 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| CNQ54_RS25095 () | 53980..54237 | - | 258 | Protein_61 | Tn3 family transposase | - |
| CNQ54_RS25100 () | 54235..54648 | + | 414 | Protein_62 | phosphopyruvate hydratase | - |
| CNQ54_RS25110 () | 54989..55369 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| CNQ54_RS25115 () | 55749..56942 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| CNQ54_RS25120 () | 57078..58802 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| CNQ54_RS25125 () | 58803..59750 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| CNQ54_RS25130 () | 59750..61492 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| CNQ54_RS25135 () | 61489..62766 | + | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| CNQ54_RS25140 () | 62848..65049 | + | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| CNQ54_RS25155 () | 65429..66126 | + | 698 | Protein_70 | IS1 family transposase IS1R | Transposase |
| CNQ54_RS25165 () | 66380..67402 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| CNQ54_RS25170 () | 67387..68952 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| CNQ54_RS25175 () | 69027..69443 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CNQ54_RS25180 () | 69440..69670 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CNQ54_RS25185 () | 70051..73845 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| CNQ54_RS25190 () | 73890..74306 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CNQ54_RS25195 () | 74303..74533 | - | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CNQ54_RS25200 () | 74798..75298 | + | 501 | WP_000528931.1 | hypothetical protein | - |
| CNQ54_RS25205 () | 75311..76084 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| CNQ54_RS25210 () | 76251..77384 | + | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| CNQ54_RS25215 () | 77418..77930 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| CNQ54_RS25220 () | 78497..78715 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| CNQ54_RS25225 () | 78717..79022 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | - |
| CNQ54_RS25230 () | 79023..79829 | + | 807 | WP_000016982.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|