MGE detailed information
MGE type: Genomic_island MGE length: 26523 bp
Accession: NZ_CP023285 Location: 2936632..2963154 Organism: Xanthomonas citri pv. citri strain 03-1638-1-1 Replicon: chromosome
Accession: NZ_CP023285 Location: 2936632..2963154 Organism: Xanthomonas citri pv. citri strain 03-1638-1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLM98_RS13435 () | 2933554..2933730 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| CLM98_RS13440 () | 2933950..2934351 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| CLM98_RS13450 () | 2934640..2935731 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| CLM98_RS13460 () | 2936632..2938804 | + | 2173 | Protein_2507 | DotA/TraY family protein | - |
| CLM98_RS13465 () | 2938814..2939335 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| CLM98_RS25675 () | 2940200..2941156 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| CLM98_RS13480 () | 2941223..2942356 | - | 1134 | Protein_2510 | IS5 family transposase | - |
| CLM98_RS13485 () | 2942396..2943483 | - | 1088 | Protein_2511 | IS3 family transposase | - |
| CLM98_RS13490 () | 2943696..2943875 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| CLM98_RS13495 () | 2944146..2944460 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| CLM98_RS13500 () | 2944463..2944753 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CLM98_RS13505 () | 2944741..2945019 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| CLM98_RS13510 () | 2945193..2946458 | - | 1266 | Protein_2516 | transposase | - |
| CLM98_RS13515 () | 2946507..2947732 | + | 1226 | Protein_2517 | IS3 family transposase | - |
| CLM98_RS13520 () | 2948350..2949306 | + | 957 | WP_197707729.1 | recombinase family protein | - |
| CLM98_RS13525 () | 2949496..2951604 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| CLM98_RS13530 () | 2951655..2951843 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| CLM98_RS13535 () | 2951840..2953426 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| CLM98_RS13540 () | 2953423..2954340 | + | 918 | WP_075668859.1 | XamI family restriction endonuclease | - |
| CLM98_RS13545 () | 2954349..2954678 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| CLM98_RS13550 () | 2954782..2955192 | + | 411 | WP_011051586.1 | plasmid pRiA4b ORF-3 family protein | - |
| CLM98_RS25680 () | 2955215..2955391 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| CLM98_RS25685 () | 2955454..2955639 | - | 186 | WP_015463319.1 | hypothetical protein | - |
| CLM98_RS13560 () | 2955584..2955784 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| CLM98_RS13565 () | 2956345..2956605 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| CLM98_RS13570 () | 2957004..2958005 | - | 1002 | WP_011051588.1 | replication protein | - |
| CLM98_RS13575 () | 2958238..2958471 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| CLM98_RS13580 () | 2959050..2960444 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| CLM98_RS13585 () | 2960441..2962558 | + | 2118 | WP_011051591.1 | ATP-binding protein | - |
| CLM98_RS25690 () | 2962978..2963154 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| CLM98_RS13590 () | 2963437..2964543 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| CLM98_RS13595 () | 2964586..2965095 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| CLM98_RS13600 () | 2965107..2966765 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| CLM98_RS13605 () | 2967076..2967681 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |