MGE detailed information
MGE type: Conjugative plasmid MGE length: 106579 bp
Accession: NZ_CP023187 Location: 1..106579 Organism: Klebsiella michiganensis strain K518 Replicon: plasmid pK518_NDM1
Accession: NZ_CP023187 Location: 1..106579 Organism: Klebsiella michiganensis strain K518 Replicon: plasmid pK518_NDM1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKQ55_RS30905 () | 726..1643 | - | 918 | Protein_1 | IS5 family transposase | - |
| CKQ55_RS30910 () | 1748..2370 | - | 623 | Protein_2 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CKQ55_RS30915 () | 2740..3943 | + | 1204 | Protein_3 | AAA family ATPase | - |
| CKQ55_RS30920 () | 3999..4906 | + | 908 | Protein_4 | ParB/RepB/Spo0J family partition protein | - |
| CKQ55_RS30930 () | 5042..6313 | - | 1272 | WP_015493081.1 | Y-family DNA polymerase | - |
| CKQ55_RS30935 () | 6313..6734 | - | 422 | Protein_6 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CKQ55_RS30940 () | 6794..8014 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| CKQ55_RS30945 () | 8238..8909 | - | 672 | WP_015493079.1 | SOS response-associated peptidase family protein | - |
| CKQ55_RS30950 () | 9268..9945 | + | 678 | WP_002211749.1 | DNA methylase | - |
| CKQ55_RS30955 () | 9945..10166 | + | 222 | WP_015493077.1 | hypothetical protein | - |
| CKQ55_RS30960 () | 10177..10596 | + | 420 | WP_016479994.1 | DUF1380 domain-containing protein | - |
| CKQ55_RS30965 () | 10650..11429 | + | 780 | WP_015493075.1 | hypothetical protein | - |
| CKQ55_RS30970 () | 11834..12340 | + | 507 | WP_015493074.1 | antirestriction protein ArdA | - |
| CKQ55_RS30975 () | 12383..12574 | + | 192 | WP_015493073.1 | hypothetical protein | - |
| CKQ55_RS30980 () | 12767..13021 | + | 255 | WP_015493072.1 | DNA polymerase III subunit theta | - |
| CKQ55_RS30985 () | 13056..13372 | + | 317 | Protein_16 | hypothetical protein | - |
| CKQ55_RS30995 () | 13998..14228 | + | 231 | WP_015493071.1 | DUF905 domain-containing protein | - |
| CKQ55_RS31000 () | 14299..16308 | + | 2010 | WP_016479992.1 | ParB/RepB/Spo0J family partition protein | - |
| CKQ55_RS31005 () | 16351..16782 | + | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| CKQ55_RS31010 () | 16779..17507 | + | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| CKQ55_RS32315 () | 17504..17827 | + | 324 | WP_008324183.1 | hypothetical protein | - |
| CKQ55_RS31020 () | 17889..18248 | + | 360 | WP_015493069.1 | hypothetical protein | - |
| CKQ55_RS31025 () | 18875..19249 | + | 375 | WP_008324180.1 | hypothetical protein | - |
| CKQ55_RS31030 () | 19303..19590 | + | 288 | WP_008324178.1 | hypothetical protein | - |
| CKQ55_RS31035 () | 19637..19981 | + | 345 | WP_008324177.1 | hypothetical protein | - |
| CKQ55_RS31040 () | 20067..20330 | + | 264 | WP_008324174.1 | hypothetical protein | - |
| CKQ55_RS31045 () | 20373..21203 | + | 831 | WP_008324171.1 | type I restriction-modification system subunit M | - |
| CKQ55_RS31050 () | 21830..22360 | + | 531 | WP_008324170.1 | antirestriction protein | - |
| CKQ55_RS31055 () | 22407..22883 | - | 477 | WP_008324168.1 | hypothetical protein | VF |
| CKQ55_RS31060 () | 23315..23707 | + | 393 | WP_008324167.1 | relaxosome protein TraM | - |
| CKQ55_RS31065 () | 23896..24585 | + | 690 | WP_008324166.1 | hypothetical protein | - |
| CKQ55_RS31070 () | 24672..24896 | + | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| CKQ55_RS31075 () | 24954..25304 | + | 351 | WP_016247536.1 | type IV conjugative transfer system pilin TraA | - |
| CKQ55_RS31080 () | 25455..25760 | + | 306 | WP_016479987.1 | type IV conjugative transfer system protein TraL | - |
| CKQ55_RS31085 () | 25775..26341 | + | 567 | WP_016247535.1 | type IV conjugative transfer system protein TraE | - |
| CKQ55_RS31090 () | 26328..27071 | + | 744 | WP_008324157.1 | type-F conjugative transfer system secretin TraK | - |
| CKQ55_RS31095 () | 27058..28452 | + | 1395 | WP_016479986.1 | conjugal transfer protein TraB | - |
| CKQ55_RS31100 () | 28474..29013 | + | 540 | WP_016247533.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CKQ55_RS31105 () | 29133..29357 | + | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| CKQ55_RS31110 () | 29361..29546 | + | 186 | WP_008324139.1 | hypothetical protein | - |
| CKQ55_RS31115 () | 29530..29931 | + | 402 | WP_016479985.1 | hypothetical protein | - |
| CKQ55_RS31120 () | 29921..30487 | + | 567 | WP_008324135.1 | conjugal transfer protein TraP | - |
| CKQ55_RS31125 () | 30480..33110 | + | 2631 | WP_008324134.1 | type IV secretion system protein TraC | - |
| CKQ55_RS31130 () | 33107..33508 | + | 402 | WP_095762646.1 | type-F conjugative transfer system protein TrbI | - |
| CKQ55_RS31135 () | 33453..34100 | + | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| CKQ55_RS31140 () | 34103..35089 | + | 987 | WP_042934586.1 | conjugal transfer pilus assembly protein TraU | - |
| CKQ55_RS31145 () | 35106..35735 | + | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CKQ55_RS31150 () | 35732..37585 | + | 1854 | WP_016479983.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CKQ55_RS31155 () | 37617..37805 | + | 189 | WP_008324128.1 | hypothetical protein | - |
| CKQ55_RS31160 () | 37836..38585 | + | 750 | WP_008324127.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CKQ55_RS31165 () | 38602..38850 | + | 249 | WP_016479982.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CKQ55_RS31170 () | 38840..39394 | + | 555 | WP_008324125.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CKQ55_RS31175 () | 39387..39815 | + | 429 | WP_008324122.1 | hypothetical protein | - |
| CKQ55_RS31180 () | 39802..41172 | + | 1371 | WP_016247527.1 | conjugal transfer protein TraH | - |
| CKQ55_RS31185 () | 41172..43994 | + | 2823 | WP_008324119.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CKQ55_RS31190 () | 44016..44447 | + | 432 | WP_008324118.1 | entry exclusion protein | - |
| CKQ55_RS31195 () | 44522..45197 | + | 676 | Protein_57 | Sel1-repeat-containing protein YbeT | VF |
| CKQ55_RS31200 () | 45331..47577 | + | 2247 | WP_016479979.1 | type IV conjugative transfer system coupling protein TraD | - |
| CKQ55_RS31205 () | 47577..52817 | + | 5241 | WP_016479978.1 | Multifunctional conjugation protein TraI | Relaxase |
| CKQ55_RS31210 () | 52819..53556 | + | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CKQ55_RS31215 () | 53623..54342 | + | 720 | WP_008324922.1 | fertility inhibition protein FinO | - |
| CKQ55_RS31220 () | 54335..55126 | + | 792 | WP_016479977.1 | DsbA family protein | - |
| CKQ55_RS31225 () | 55274..55819 | + | 546 | WP_008324931.1 | Phospholipase D | VF |
| CKQ55_RS31230 () | 55971..56249 | + | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| CKQ55_RS31240 () | 56468..56545 | + | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| CKQ55_RS31245 () | 56538..57401 | + | 864 | WP_016247520.1 | incFII family plasmid replication initiator RepA | - |
| CKQ55_RS31270 () | 58545..59393 | + | 849 | WP_032072916.1 | hypothetical protein | - |
| CKQ55_RS31275 () | 59453..59737 | + | 285 | WP_032072917.1 | hypothetical protein | - |
| CKQ55_RS31280 () | 59826..60119 | + | 294 | WP_032072918.1 | hypothetical protein | - |
| CKQ55_RS31285 () | 60134..60724 | + | 591 | WP_064762226.1 | hypothetical protein | - |
| CKQ55_RS31290 () | 60751..61332 | + | 582 | WP_045265539.1 | DUF2913 family protein | - |
| CKQ55_RS31295 () | 61776..62333 | - | 558 | WP_042934582.1 | hypothetical protein | - |
| CKQ55_RS31300 () | 62461..62838 | - | 378 | Protein_73 | restriction endonuclease | - |
| CKQ55_RS31305 () | 62985..63965 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| CKQ55_RS32320 () | 64169..64324 | + | 156 | WP_000074143.1 | hypothetical protein | - |
| CKQ55_RS31310 () | 64373..65365 | + | 993 | WP_001145102.1 | hypothetical protein | - |
| CKQ55_RS31315 () | 65434..66309 | + | 876 | Protein_77 | IS5 family transposase ISKpn26 | Transposase |
| CKQ55_RS31320 () | 66518..67177 | - | 660 | WP_032072920.1 | endonuclease III | - |
| CKQ55_RS31325 () | 67559..68110 | - | 552 | Protein_79 | DNA cytosine methyltransferase | - |
| CKQ55_RS31335 () | 68727..69026 | + | 300 | WP_001183923.1 | DUF2293 domain-containing protein | - |
| CKQ55_RS31340 () | 69110..69352 | - | 243 | WP_000376617.1 | hypothetical protein | - |
| CKQ55_RS31350 () | 69480..70319 | - | 840 | WP_032072921.1 | Dihydropteroate synthase | ARG |
| CKQ55_RS31355 () | 70313..70381 | - | 69 | Protein_83 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| CKQ55_RS31360 () | 70698..71663 | - | 966 | WP_015460530.1 | TniQ family protein | - |
| CKQ55_RS31365 () | 71665..72597 | - | 933 | WP_015460531.1 | TniB family NTP-binding protein | - |
| CKQ55_RS31370 () | 72594..73280 | - | 687 | WP_016479967.1 | Mu transposase C-terminal domain-containing protein | - |
| CKQ55_RS31375 () | 73314..74075 | - | 762 | WP_032072922.1 | DDE-type integrase/transposase/recombinase | - |
| CKQ55_RS31385 () | 74818..76347 | + | 1530 | WP_003149906.1 | IS91 family transposase ISVsa3 | Transposase |
| CKQ55_RS31395 () | 76644..77489 | + | 846 | WP_000855769.1 | RmtC family 16S rRNA (guanine(1405)-N(7))-methyltransferase | - |
| CKQ55_RS31400 () | 78047..78859 | + | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| CKQ55_RS31405 () | 78863..79228 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| CKQ55_RS31410 () | 79233..79871 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| CKQ55_RS31415 () | 79882..80913 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| CKQ55_RS31420 () | 80918..81247 | - | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| CKQ55_RS31425 () | 81441..81731 | + | 291 | WP_004201172.1 | co-chaperone GroES | - |
| CKQ55_RS31430 () | 81787..83427 | + | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| CKQ55_RS32120 () | 83616..83792 | + | 177 | Protein_97 | IS91 family transposase | - |
| CKQ55_RS31440 () | 84053..84172 | + | 120 | Protein_98 | IS30 family transposase | - |
| CKQ55_RS31445 () | 84182..84931 | + | 750 | Protein_99 | IS3 family transposase ISEhe3 | Transposase |
| CKQ55_RS31450 () | 85078..86094 | - | 1017 | WP_087728544.1 | IS5 family transposase IS5D | Transposase |
| CKQ55_RS31460 () | 86226..86756 | - | 531 | WP_016479963.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CKQ55_RS31465 () | 86760..87029 | - | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CKQ55_RS31470 () | 87885..88874 | + | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| CKQ55_RS31475 () | 89170..89909 | - | 740 | Protein_104 | site-specific integrase | - |
| CKQ55_RS31485 () | 90391..90543 | + | 153 | Protein_105 | IS5 family transposase IS5D | Transposase |
| CKQ55_RS31490 () | 90615..91735 | + | 1121 | WP_089046468.1 | IS3 family transposase ISSen4 | Transposase |
| CKQ55_RS31495 () | 91764..92510 | + | 747 | Protein_107 | IS5 family transposase IS5D | Transposase |
| CKQ55_RS31505 () | 92672..93994 | + | 1323 | WP_016479957.1 | GntP family transporter | - |
| CKQ55_RS31510 () | 94193..94984 | - | 792 | WP_008322208.1 | site-specific integrase | - |
| CKQ55_RS31515 () | 94974..95288 | - | 315 | WP_008322211.1 | hypothetical protein | - |
| CKQ55_RS31520 () | 95290..95595 | - | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CKQ55_RS31525 () | 95597..95815 | - | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CKQ55_RS31530 () | 96677..97374 | - | 698 | Protein_113 | IS1 family transposase | - |
| CKQ55_RS31540 () | 97587..100169 | + | 2583 | WP_016479955.1 | putative signaling protein | VF |
| CKQ55_RS31545 () | 100203..100907 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CKQ55_RS31560 () | 101715..102412 | + | 698 | Protein_116 | IS1 family transposase IS1R | Transposase |
| CKQ55_RS31565 () | 102428..102631 | + | 204 | Protein_117 | MerR family transcriptional regulator | - |
| CKQ55_RS31570 () | 102926..104170 | - | 1245 | WP_016479953.1 | hypothetical protein | VF |
| CKQ55_RS31575 () | 104260..106263 | - | 2004 | WP_016479952.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|