MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47414 bp
Accession: NZ_CP023161 Location: 1..47414 Organism: Xanthomonas citri pv. malvacearum strain MS14003 Replicon: plasmid unnamed2
Accession: NZ_CP023161 Location: 1..47414 Organism: Xanthomonas citri pv. malvacearum strain MS14003 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIW72_RS22785 () | 1..669 | + | 669 | Protein_1 | IS3 family transposase ISXc8 | Transposase |
| CIW72_RS22795 () | 1317..1646 | + | 330 | WP_005918642.1 | hypothetical protein | - |
| CIW72_RS23565 () | 1696..1902 | + | 207 | WP_011052961.1 | hypothetical protein | - |
| CIW72_RS22800 () | 1956..2372 | + | 417 | WP_087942123.1 | transposase | - |
| CIW72_RS22805 () | 2503..3150 | - | 648 | WP_003490058.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CIW72_RS22810 () | 3469..7983 | - | 4515 | WP_069288204.1 | TAL effector repeat-containing protein | - |
| CIW72_RS22820 () | 8263..9207 | - | 945 | Protein_7 | TAL effector repeat-containing protein | - |
| CIW72_RS22830 () | 9524..10771 | - | 1248 | WP_005918211.1 | replication initiation protein | - |
| CIW72_RS22835 () | 11019..11333 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| CIW72_RS22840 () | 11478..11801 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| CIW72_RS22845 () | 11798..12424 | - | 627 | WP_005918230.1 | Chromosome-partitioning ATPase Soj | VF |
| CIW72_RS23850 () | 12593..12730 | + | 138 | WP_005918231.1 | hypothetical protein | - |
| CIW72_RS22855 () | 13143..13520 | - | 378 | Protein_13 | hypothetical protein | - |
| CIW72_RS22865 () | 14759..15022 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| CIW72_RS22870 () | 15047..15448 | - | 402 | WP_005917849.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CIW72_RS22875 () | 15445..15705 | - | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CIW72_RS22880 () | 15890..16111 | + | 222 | WP_005917854.1 | antitoxin MazE family protein | Antitoxin Detail |
| CIW72_RS22885 () | 16108..16431 | + | 324 | WP_005917856.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CIW72_RS22890 () | 16457..16744 | + | 288 | WP_029220894.1 | hypothetical protein | - |
| CIW72_RS22895 () | 16751..17938 | + | 1188 | WP_005917859.1 | zeta toxin family protein | - |
| CIW72_RS22900 () | 18124..18408 | - | 285 | WP_003490829.1 | hypothetical protein | - |
| CIW72_RS22905 () | 18698..21682 | - | 2985 | WP_005917862.1 | Multifunctional conjugation protein TraI | Relaxase |
| CIW72_RS22910 () | 21696..23270 | - | 1575 | WP_005917865.1 | type IV secretion system DNA-binding domain-containing protein | - |
| CIW72_RS22915 () | 23411..23752 | - | 342 | WP_078566025.1 | hypothetical protein | - |
| CIW72_RS22920 () | 23951..24571 | - | 621 | WP_033837730.1 | hypothetical protein | - |
| CIW72_RS22925 () | 24788..28690 | + | 3903 | WP_069288206.1 | TAL effector repeat-containing protein | - |
| CIW72_RS22935 () | 30330..31607 | + | 1278 | WP_069288207.1 | lytic murein transglycosylase | - |
| CIW72_RS22940 () | 31692..32762 | + | 1071 | WP_033482089.1 | hypothetical protein | - |
| CIW72_RS22950 () | 33571..34056 | - | 486 | Protein_31 | IS3 family transposase IS1389-B | Transposase |
| CIW72_RS22955 () | 34096..35182 | - | 1087 | Protein_32 | IS3 family transposase ISXac2 | Transposase |
| CIW72_RS22960 () | 35462..36583 | + | 1122 | WP_011347382.1 | type III secretion system YopJ family effector XopJ | - |
| CIW72_RS22970 () | 38287..38628 | - | 342 | Protein_35 | recombinase family protein | - |
| CIW72_RS22975 () | 38672..39370 | - | 699 | WP_005918428.1 | UPF0149 family protein | - |
| CIW72_RS22980 () | 39389..42364 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| CIW72_RS22985 () | 42369..42788 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| CIW72_RS22990 () | 42788..43027 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| CIW72_RS22995 () | 43242..44165 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| CIW72_RS23010 () | 45079..45540 | - | 462 | WP_005918303.1 | hypothetical protein | - |
| CIW72_RS23015 () | 45706..45993 | + | 288 | WP_005918301.1 | DUF3892 domain-containing protein | - |
| CIW72_RS23020 () | 46083..46781 | - | 699 | WP_069288214.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|