MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 159308 bp
Accession: NZ_CP023038 Location: 1..159308 Organism: Komagataeibacter saccharivorans strain CV1 Replicon: plasmid unnamed2
Accession: NZ_CP023038 Location: 1..159308 Organism: Komagataeibacter saccharivorans strain CV1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD178_RS15565 () | 711..1229 | + | 519 | WP_110560933.1 | DUF2147 domain-containing protein | - |
| CD178_RS15570 () | 1300..2388 | - | 1089 | WP_110560934.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| CD178_RS15575 () | 2395..3477 | - | 1083 | WP_110560935.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | - |
| CD178_RS15580 () | 3820..4578 | - | 759 | WP_110560936.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CD178_RS15585 () | 4575..5582 | - | 1008 | WP_110560937.1 | Vitamin B12 import system permease protein BtuC | VF |
| CD178_RS15590 () | 5579..6418 | - | 840 | WP_014106885.1 | hypothetical protein | VF |
| CD178_RS15595 () | 6420..8519 | - | 2100 | WP_053323837.1 | TonB-dependent receptor | - |
| CD178_RS15605 () | 9459..9926 | + | 468 | WP_010511666.1 | hypothetical protein | - |
| CD178_RS15610 () | 9931..11385 | + | 1455 | WP_010511665.1 | cobyric acid synthase | - |
| CD178_RS15620 () | 11588..11926 | - | 339 | Protein_9 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| CD178_RS15625 () | 11965..12761 | + | 797 | Protein_10 | IS5 family transposase | - |
| CD178_RS15630 () | 12769..13065 | - | 297 | Protein_11 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| CD178_RS15635 () | 13215..14198 | - | 984 | WP_010511663.1 | Rieske (2Fe-2S) protein | - |
| CD178_RS15640 () | 14226..14852 | - | 627 | Protein_13 | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | - |
| CD178_RS15645 () | 14903..16246 | + | 1344 | WP_118963842.1 | IS1182 family transposase ISGdi13 | Transposase |
| CD178_RS15650 () | 16664..16933 | + | 270 | WP_081472672.1 | hypothetical protein | - |
| CD178_RS15655 () | 17009..17641 | + | 633 | WP_010511791.1 | hypothetical protein | - |
| CD178_RS15660 () | 17638..18015 | + | 378 | WP_110560966.1 | hypothetical protein | - |
| CD178_RS15665 () | 18061..18249 | - | 189 | WP_010511790.1 | hypothetical protein | - |
| CD178_RS15670 () | 18331..18888 | + | 558 | WP_029335933.1 | phosphate-starvation-inducible PsiE family protein | - |
| CD178_RS15680 () | 19354..19836 | - | 483 | WP_010511786.1 | Hsp20 family protein | - |
| CD178_RS15685 () | 19872..20153 | - | 282 | WP_010511784.1 | hypothetical protein | - |
| CD178_RS15690 () | 20152..20415 | + | 264 | WP_102324447.1 | YXWGXW repeat-containing protein | - |
| CD178_RS15695 () | 20936..21184 | + | 249 | WP_010511782.1 | hypothetical protein | - |
| CD178_RS15700 () | 21293..21556 | + | 264 | WP_010511780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CD178_RS15705 () | 21549..21893 | + | 345 | WP_010511776.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CD178_RS15710 () | 21929..23704 | + | 1776 | WP_010511773.1 | recombinase family protein | - |
| CD178_RS15715 () | 23765..24175 | - | 411 | WP_010511772.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CD178_RS15720 () | 24176..24400 | - | 225 | WP_010511771.1 | hypothetical protein | Antitoxin Detail |
| CD178_RS15725 () | 24673..25005 | + | 333 | WP_010511770.1 | recombinase family protein | - |
| CD178_RS15730 () | 25452..26066 | + | 615 | WP_010511769.1 | hydroxyethylthiazole kinase | - |
| CD178_RS15735 () | 26119..26915 | + | 797 | Protein_31 | IS5 family transposase | - |
| CD178_RS15740 () | 26905..28158 | - | 1254 | WP_162900555.1 | MFS transporter | - |
| CD178_RS15745 () | 28155..30557 | - | 2403 | WP_010510938.1 | TonB-dependent receptor | - |
| CD178_RS15750 () | 30568..32100 | - | 1533 | WP_110560939.1 | choline-sulfatase | - |
| CD178_RS15755 () | 32222..33148 | + | 927 | WP_110560940.1 | LysR family transcriptional regulator | - |
| CD178_RS15760 () | 33318..33674 | + | 357 | Protein_36 | IS3 family transposase | - |
| CD178_RS15765 () | 33672..33998 | - | 327 | Protein_37 | MFS transporter | - |
| CD178_RS15770 () | 34164..34871 | + | 708 | WP_110560948.1 | HTH-type transcriptional activator RhaR | VF |
| CD178_RS15775 () | 35110..35466 | + | 357 | Protein_39 | SDR family oxidoreductase | - |
| CD178_RS15780 () | 35643..36494 | - | 852 | WP_110560941.1 | helix-turn-helix transcriptional regulator | - |
| CD178_RS15785 () | 36589..37476 | + | 888 | WP_110560942.1 | SDR family oxidoreductase | - |
| CD178_RS15800 () | 39077..39784 | - | 708 | Protein_43 | aldo/keto reductase | - |
| CD178_RS15805 () | 39888..40427 | + | 540 | WP_110560949.1 | TetR/AcrR family transcriptional regulator | - |
| CD178_RS15810 () | 41461..42237 | - | 777 | WP_110560944.1 | segregation/condensation protein A | - |
| CD178_RS15815 () | 42227..43564 | - | 1338 | WP_171791132.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| CD178_RS15825 () | 43998..45443 | + | 1446 | WP_110560945.1 | Tn3 family transposase TnpR_ISPa43 | Transposase |
| CD178_RS15830 () | 45530..46456 | + | 927 | WP_110560946.1 | ketopantoate reductase family protein | - |
| CD178_RS15835 () | 46589..48157 | - | 1569 | WP_075594768.1 | IS66 family transposase ISAli10 | Transposase |
| CD178_RS15840 () | 48223..48570 | - | 348 | WP_019092242.1 | IS66 family transposase ISAzs20 | Transposase |
| CD178_RS15845 () | 48567..48950 | - | 384 | WP_075594769.1 | IS66 family transposase ISAzca2 | Transposase |
| CD178_RS15850 () | 49333..50406 | - | 1074 | WP_087608926.1 | alkene reductase | - |
| CD178_RS15855 () | 50713..50856 | + | 144 | Protein_53 | IS91 family transposase ISMno24 | Transposase |
| CD178_RS15860 () | 51299..51448 | - | 150 | WP_081477948.1 | DUF2474 domain-containing protein | - |
| CD178_RS15865 () | 51435..52454 | - | 1020 | WP_087608924.1 | cytochrome d ubiquinol oxidase subunit II | - |
| CD178_RS15870 () | 52457..53890 | - | 1434 | WP_087608923.1 | cytochrome ubiquinol oxidase subunit I | - |
| CD178_RS15875 () | 54169..55941 | - | 1773 | WP_110560072.1 | AMP-binding protein | - |
| CD178_RS15880 () | 55957..57204 | - | 1248 | WP_010512404.1 | MSMEG_0569 family flavin-dependent oxidoreductase | - |
| CD178_RS15885 () | 57221..57508 | - | 288 | WP_010512420.1 | MSMEG_0570 family nitrogen starvation response protein | - |
| CD178_RS15890 () | 57496..58674 | - | 1179 | WP_010512419.1 | D-inositol-3-phosphate glycosyltransferase | VF |
| CD178_RS15895 () | 58671..59645 | - | 975 | WP_014106929.1 | sll0787 family AIR synthase-like protein | - |
| CD178_RS15900 () | 59642..60205 | - | 564 | WP_110560073.1 | GNAT family N-acetyltransferase | - |
| CD178_RS15905 () | 60202..61311 | - | 1110 | WP_110560074.1 | MSMEG_0568 family radical SAM protein | - |
| CD178_RS15910 () | 61308..62282 | - | 975 | WP_110560075.1 | Nit6803 family nitriliase | - |
| CD178_RS15915 () | 62307..62789 | - | 483 | WP_110560076.1 | MSMEG_0572 family nitrogen starvation response protein | - |
| CD178_RS15920 () | 63130..64533 | - | 1404 | WP_014106934.1 | PLP-dependent aminotransferase family protein | - |
| CD178_RS15925 () | 64688..65719 | + | 1032 | WP_174234179.1 | IS5 family transposase ISMex35 | Transposase |
| CD178_RS15930 () | 66232..67062 | - | 831 | WP_118963844.1 | hypothetical protein | VF |
| CD178_RS15935 () | 67194..67628 | + | 435 | WP_041247944.1 | DUF2946 family protein | - |
| CD178_RS15940 () | 67696..69852 | + | 2157 | WP_014106938.1 | TonB-dependent receptor | - |
| CD178_RS15945 () | 69871..70248 | - | 378 | Protein_71 | lipopolysaccharide biosynthesis protein | - |
| CD178_RS15950 () | 70308..71494 | + | 1187 | WP_118963845.1 | IS3 family transposase ISGxy1 | Transposase |
| CD178_RS15955 () | 71748..72185 | - | 438 | WP_087609043.1 | CopG family transcriptional regulator | - |
| CD178_RS15960 () | 72182..74185 | - | 2004 | Protein_74 | hypothetical protein | VF |
| CD178_RS15965 () | 74356..74934 | - | 579 | WP_014106943.1 | zeta toxin family protein | - |
| CD178_RS15970 () | 74931..75152 | - | 222 | WP_010512019.1 | hypothetical protein | - |
| CD178_RS15975 () | 75241..75786 | - | 546 | WP_014106942.1 | TetR/AcrR family transcriptional regulator | - |
| CD178_RS15980 () | 75880..76488 | + | 609 | WP_034928099.1 | glutathione S-transferase | - |
| CD178_RS15985 () | 76510..78251 | - | 1742 | Protein_79 | hypothetical protein | Relaxase |
| CD178_RS15990 () | 78480..79160 | - | 681 | WP_087609042.1 | lytic transglycosylase domain-containing protein | - |
| CD178_RS15995 () | 79157..79498 | - | 342 | WP_034928093.1 | DUF736 domain-containing protein | - |
| CD178_RS16000 () | 79552..79878 | - | 327 | Protein_82 | site-specific DNA-methyltransferase | - |
| CD178_RS16005 () | 80121..80585 | - | 465 | Protein_83 | replication initiator protein A | - |
| CD178_RS16010 () | 80582..82450 | - | 1869 | Protein_84 | strawberry notch family protein | - |
| CD178_RS16015 () | 82648..82923 | + | 276 | WP_034928090.1 | HU family DNA-binding protein | - |
| CD178_RS17770 () | 83038..83469 | + | 432 | WP_034928088.1 | hypothetical protein | - |
| CD178_RS16020 () | 83450..84433 | + | 984 | WP_157684884.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CD178_RS17775 () | 84402..85190 | + | 789 | WP_133250329.1 | hypothetical protein | - |
| CD178_RS16030 () | 85200..85949 | - | 750 | Protein_89 | IS5 family transposase | - |
| CD178_RS16035 () | 86063..86344 | - | 282 | WP_007400711.1 | IS5 family transposase ISAli12B | Transposase |
| CD178_RS16040 () | 86382..86681 | + | 300 | WP_110096372.1 | DUF1348 family protein | - |
| CD178_RS16045 () | 86730..87476 | - | 747 | WP_034928751.1 | SDR family oxidoreductase | - |
| CD178_RS16050 () | 87630..88544 | + | 915 | WP_087609040.1 | HTH-type transcriptional activator RhaR | VF |
| CD178_RS16055 () | 88751..89833 | - | 1083 | WP_048851911.1 | AbrB family transcriptional regulator | - |
| CD178_RS16060 () | 89843..90412 | - | 570 | WP_087609073.1 | hydrolase | - |
| CD178_RS16065 () | 90529..91158 | + | 630 | WP_087609039.1 | TetR/AcrR family transcriptional regulator | - |
| CD178_RS16070 () | 91294..92187 | - | 894 | WP_087609038.1 | alpha/beta hydrolase | - |
| CD178_RS16075 () | 93141..94079 | + | 939 | WP_087609072.1 | plasmid replication initiator | - |
| CD178_RS16080 () | 94157..94813 | + | 657 | Protein_99 | IS630 family transposase ISBj5 | Transposase |
| CD178_RS16085 () | 95375..96073 | - | 699 | WP_007400691.1 | hypothetical protein | - |
| CD178_RS16090 () | 96070..96705 | - | 636 | WP_082267077.1 | ParA family protein | - |
| CD178_RS16095 () | 97294..102393 | + | 5100 | WP_110560869.1 | lactate dehydrogenase | - |
| CD178_RS16100 () | 102571..104496 | + | 1926 | WP_110560870.1 | ParB/RepB/Spo0J family partition protein | - |
| CD178_RS16105 () | 104680..105018 | + | 339 | WP_110560871.1 | hypothetical protein | - |
| CD178_RS16110 () | 105011..105424 | + | 414 | WP_110560872.1 | hypothetical protein | - |
| CD178_RS16115 () | 105581..106612 | + | 1032 | WP_110560873.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| CD178_RS16120 () | 106644..106952 | + | 309 | WP_010515656.1 | hypothetical protein | - |
| CD178_RS16125 () | 107075..107590 | + | 516 | WP_019092689.1 | DUF3085 domain-containing protein | - |
| CD178_RS17780 () | 107805..107960 | + | 156 | WP_010515653.1 | hypothetical protein | - |
| CD178_RS16130 () | 108030..108929 | + | 900 | WP_110560874.1 | DUF1738 domain-containing protein | - |
| CD178_RS16135 () | 108975..109370 | + | 396 | WP_110560875.1 | hypothetical protein | - |
| CD178_RS16140 () | 109367..109756 | + | 390 | WP_110560876.1 | hypothetical protein | - |
| CD178_RS16145 () | 109753..110259 | + | 507 | WP_110560877.1 | hypothetical protein | - |
| CD178_RS16150 () | 110256..110768 | - | 513 | WP_110560878.1 | hypothetical protein | - |
| CD178_RS16155 () | 111133..111603 | + | 471 | WP_110560879.1 | single-stranded DNA-binding protein | - |
| CD178_RS16160 () | 112183..113382 | + | 1200 | WP_110560880.1 | DUF3991 and toprim domain-containing protein | - |
| CD178_RS17850 () | 113687..114022 | + | 336 | WP_174234180.1 | hypothetical protein | - |
| CD178_RS16170 () | 114019..116070 | + | 2052 | WP_110560882.1 | ATP-dependent helicase | - |
| CD178_RS16175 () | 116201..116635 | + | 435 | WP_110560883.1 | hypothetical protein | - |
| CD178_RS16180 () | 116629..117210 | - | 582 | WP_110560884.1 | NERD domain-containing protein | - |
| CD178_RS16185 () | 117477..117803 | - | 327 | Protein_121 | helix-turn-helix transcriptional regulator | - |
| CD178_RS16190 () | 117904..118923 | + | 1020 | WP_110560885.1 | Zinc-type alcohol dehydrogenase-like protein | VF |
| CD178_RS16195 () | 118989..119423 | + | 435 | WP_010515638.1 | cupin domain-containing protein | - |
| CD178_RS16200 () | 119945..120625 | + | 681 | WP_110560886.1 | hypothetical protein | - |
| CD178_RS16205 () | 120782..122395 | + | 1614 | WP_110560887.1 | ISL3 family transposase ISAzs8 | Transposase |
| CD178_RS16210 () | 122445..122747 | + | 303 | WP_110560888.1 | hypothetical protein | - |
| CD178_RS16215 () | 123100..123507 | - | 408 | WP_110560889.1 | hypothetical protein | - |
| CD178_RS16220 () | 123521..124333 | - | 813 | WP_110560890.1 | hypothetical protein | - |
| CD178_RS16225 () | 124444..124938 | - | 495 | WP_110532102.1 | hypothetical protein | - |
| CD178_RS16230 () | 124938..125768 | - | 831 | WP_110560891.1 | FAD-binding oxidoreductase | - |
| CD178_RS16235 () | 125772..126347 | - | 576 | WP_110560892.1 | hypothetical protein | - |
| CD178_RS16240 () | 126730..127020 | + | 291 | WP_010518281.1 | nucleotidyltransferase | - |
| CD178_RS16245 () | 127056..127373 | + | 318 | WP_019086859.1 | DUF86 domain-containing protein | - |
| CD178_RS16250 () | 127627..128052 | - | 426 | WP_019086860.1 | type II toxin-antitoxin system VapC family toxin | - |
| CD178_RS16255 () | 128049..128291 | - | 243 | WP_010518306.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CD178_RS16260 () | 128984..129280 | + | 297 | WP_034926251.1 | hypothetical protein | - |
| CD178_RS16265 () | 129280..132498 | + | 3219 | WP_118963846.1 | hypothetical protein | Relaxase |
| CD178_RS17785 () | 132656..132880 | + | 225 | WP_162531789.1 | hypothetical protein | - |
| CD178_RS16275 () | 133124..133609 | + | 486 | WP_110560895.1 | MucR family transcriptional regulator | - |
| CD178_RS16280 () | 133999..135543 | - | 1545 | WP_110560896.1 | Fic family protein | - |
| CD178_RS17790 () | 135985..136167 | - | 183 | WP_162900556.1 | hypothetical protein | - |
| CD178_RS16290 () | 136662..137978 | - | 1317 | WP_102325845.1 | DUF1173 family protein | - |
| CD178_RS16295 () | 137975..140317 | - | 2343 | WP_110560897.1 | hypothetical protein | VF |
| CD178_RS16300 () | 140321..140926 | - | 606 | WP_110560898.1 | hypothetical protein | - |
| CD178_RS16305 () | 140901..142082 | - | 1182 | WP_110560899.1 | hypothetical protein | - |
| CD178_RS16310 () | 142079..142588 | - | 510 | WP_110560900.1 | hypothetical protein | VF |
| CD178_RS16315 () | 142585..143007 | - | 423 | WP_025811690.1 | hypothetical protein | - |
| CD178_RS16320 () | 143004..143252 | - | 249 | WP_053324023.1 | hypothetical protein | VF |
| CD178_RS16325 () | 143252..144414 | - | 1163 | Protein_149 | hypothetical protein | VF |
| CD178_RS16330 () | 144411..145451 | - | 1041 | WP_110560902.1 | hypothetical protein | VF |
| CD178_RS16335 () | 145444..145902 | - | 459 | WP_110560903.1 | DotD/TraH family lipoprotein | - |
| CD178_RS16340 () | 146230..146619 | + | 390 | WP_007396668.1 | hypothetical protein | - |
| CD178_RS16345 () | 146830..147990 | - | 1161 | WP_162900557.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CD178_RS16350 () | 148200..148577 | + | 378 | WP_014106824.1 | helix-turn-helix domain-containing protein | - |
| CD178_RS16355 () | 148577..149809 | + | 1233 | WP_014106825.1 | type II toxin-antitoxin system HipA family toxin | - |
| CD178_RS16360 () | 149978..151042 | - | 1065 | Protein_156 | hypothetical protein | VF |
| CD178_RS16365 () | 151027..151413 | - | 387 | Protein_157 | IS21 family transposase ISGdi17 | Transposase |
| CD178_RS16370 () | 151521..153044 | + | 1524 | WP_118962232.1 | IS21 family transposase ISGdi17 | Transposase |
| CD178_RS16375 () | 153034..153813 | + | 780 | WP_102325896.1 | IS21 family transposase ISGdi17 | Transposase |
| CD178_RS16380 () | 154160..154968 | - | 809 | Protein_160 | IS3 family transposase ISGdi11 | Transposase |
| CD178_RS16385 () | 154981..155178 | + | 198 | Protein_161 | hypothetical protein | - |
| CD178_RS16390 () | 155712..156137 | - | 426 | WP_102325952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CD178_RS16395 () | 156134..156376 | - | 243 | WP_102325950.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| CD178_RS16405 () | 158268..158783 | + | 516 | WP_014106876.1 | hypothetical protein | - |
| CD178_RS16410 () | 158764..159249 | + | 486 | WP_014106877.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|