MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86369 bp
Accession: NZ_CP022965 Location: 1..86369 Organism: Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal Replicon: plasmid pQJDsal2
Accession: NZ_CP022965 Location: 1..86369 Organism: Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal Replicon: plasmid pQJDsal2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJD41_RS24375 () | 95..511 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| CJD41_RS24380 () | 597..1714 | - | 1118 | Protein_1 | DNA-binding protein | - |
| CJD41_RS24385 () | 2152..2463 | + | 312 | WP_120116672.1 | cytoplasmic protein | - |
| CJD41_RS24395 () | 3092..3844 | + | 753 | WP_120116663.1 | carbonic anhydrase | - |
| CJD41_RS24400 () | 4051..4607 | + | 557 | Protein_4 | recombinase family protein | - |
| CJD41_RS24405 () | 4591..6258 | + | 1668 | Protein_5 | DDE-type integrase/transposase/recombinase | - |
| CJD41_RS24410 () | 6243..7208 | + | 966 | Protein_6 | ExeA family protein | - |
| CJD41_RS24415 () | 7396..8432 | - | 1037 | Protein_7 | IS630 family transposase | - |
| CJD41_RS24420 () | 9040..9932 | + | 893 | Protein_8 | virulence genes transcriptional activator SpvR | - |
| CJD41_RS24425 () | 10106..10270 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| CJD41_RS24430 () | 10444..11211 | + | 768 | WP_001541537.1 | virulence protein SpvA | - |
| CJD41_RS25125 () | 11174..11341 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| CJD41_RS24435 () | 11393..13168 | + | 1776 | WP_001746580.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| CJD41_RS24440 () | 13449..14174 | + | 726 | WP_001746581.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| CJD41_RS24445 () | 14435..15085 | + | 651 | WP_001746582.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| CJD41_RS24450 () | 15212..15640 | - | 429 | WP_039563782.1 | IS200/IS605 family transposase | - |
| CJD41_RS24455 () | 15697..16047 | + | 351 | WP_001746584.1 | helix-turn-helix domain-containing protein | - |
| CJD41_RS24460 () | 16114..16674 | - | 561 | WP_071785580.1 | inverse autotransporter beta domain-containing protein | - |
| CJD41_RS24465 () | 17394..17879 | - | 486 | WP_000905606.1 | membrane protein | - |
| CJD41_RS24470 () | 17873..18382 | - | 510 | WP_001576634.1 | CaiF/GrlA family transcriptional regulator | - |
| CJD41_RS24480 () | 18386..19099 | - | 714 | Protein_20 | EAL domain-containing protein | - |
| CJD41_RS24485 () | 19108..19890 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| CJD41_RS24490 () | 19925..20446 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| CJD41_RS24495 () | 20443..20733 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| CJD41_RS24500 () | 20735..21040 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CJD41_RS24505 () | 21042..21260 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CJD41_RS24510 () | 22005..22235 | + | 231 | WP_001261283.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CJD41_RS24515 () | 22232..22660 | + | 429 | WP_001746752.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CJD41_RS24530 () | 23230..24078 | - | 849 | WP_000175397.1 | SdiA-regulated domain-containing protein | - |
| CJD41_RS25130 () | 24104..24265 | - | 162 | WP_001816720.1 | hypothetical protein | - |
| CJD41_RS24535 () | 24526..24738 | - | 213 | WP_000063791.1 | hypothetical protein | - |
| CJD41_RS24540 () | 24811..25395 | - | 585 | WP_024138406.1 | hypothetical protein | - |
| CJD41_RS24550 () | 25520..26233 | - | 714 | WP_000801114.1 | hypothetical protein | - |
| CJD41_RS24560 () | 26495..27259 | - | 765 | WP_001746754.1 | minor fimbrial protein | - |
| CJD41_RS24565 () | 27287..28084 | - | 798 | WP_000704722.1 | F4 (K88) fimbria minor subunit FaeH | - |
| CJD41_RS24570 () | 28320..28592 | - | 273 | WP_001178538.1 | hypothetical protein | - |
| CJD41_RS24580 () | 30050..30709 | + | 660 | WP_001575507.1 | hypothetical protein | - |
| CJD41_RS24585 () | 30745..31540 | + | 796 | Protein_37 | hypothetical protein | - |
| CJD41_RS25135 () | 31834..32031 | + | 198 | WP_001675602.1 | transposase | - |
| CJD41_RS25140 () | 32186..32400 | + | 215 | Protein_39 | IS66 family insertion sequence element accessory protein TnpB | - |
| CJD41_RS24595 () | 32392..32796 | + | 405 | Protein_40 | transposase | - |
| CJD41_RS24605 () | 33591..34472 | - | 882 | WP_001746973.1 | incFII family plasmid replication initiator RepA | - |
| CJD41_RS24610 () | 34453..34530 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| CJD41_RS24620 () | 34778..35044 | - | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| CJD41_RS24625 () | 35223..35665 | - | 443 | Protein_44 | phospholipase | - |
| CJD41_RS24630 () | 35831..35986 | - | 156 | WP_024138419.1 | hypothetical protein | - |
| CJD41_RS24635 () | 36002..36284 | - | 283 | Protein_46 | disulfide bond formation protein DsbA | - |
| CJD41_RS24640 () | 36401..36964 | - | 564 | WP_000129019.1 | fertility inhibition protein FinO | - |
| CJD41_RS24645 () | 37019..37759 | - | 741 | WP_000177627.1 | conjugal transfer pilus acetylase TraX | - |
| CJD41_RS24650 () | 37779..42758 | - | 4980 | WP_079786986.1 | conjugative transfer relaxase/helicase TraI | - |
| CJD41_RS24655 () | 42758..45010 | - | 2253 | WP_023212018.1 | type IV conjugative transfer system coupling protein TraD | - |
| CJD41_RS24665 () | 45387..46118 | - | 732 | WP_000850404.1 | complement resistance protein TraT | - |
| CJD41_RS24670 () | 46364..46846 | - | 483 | WP_000787664.1 | hypothetical protein | - |
| CJD41_RS24675 () | 46868..49354 | - | 2487 | WP_015059448.1 | F-type conjugal transfer protein TraH | - |
| CJD41_RS24680 () | 49344..49892 | - | 549 | WP_000055842.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CJD41_RS24685 () | 49879..50172 | - | 294 | WP_001233883.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CJD41_RS24690 () | 50386..51129 | - | 744 | WP_001746545.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CJD41_RS24695 () | 51142..51357 | - | 216 | WP_001746544.1 | conjugal transfer protein TrbE | - |
| CJD41_RS24700 () | 51368..51844 | - | 477 | WP_001746543.1 | hypothetical protein | - |
| CJD41_RS24705 () | 51855..53681 | - | 1827 | WP_001746541.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CJD41_RS24710 () | 53678..54097 | - | 420 | WP_001229398.1 | HNH endonuclease | - |
| CJD41_RS24715 () | 54134..54772 | - | 639 | WP_079786993.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CJD41_RS24720 () | 54757..55065 | - | 309 | WP_001576663.1 | hypothetical protein | - |
| CJD41_RS24725 () | 55084..56076 | - | 993 | WP_015059450.1 | conjugal transfer pilus assembly protein TraU | - |
| CJD41_RS24730 () | 56073..56705 | - | 633 | WP_015059451.1 | type-F conjugative transfer system protein TraW | - |
| CJD41_RS24735 () | 56702..57088 | - | 387 | WP_000102756.1 | type-F conjugative transfer system protein TrbI | - |
| CJD41_RS24740 () | 57063..59710 | - | 2648 | Protein_66 | type IV secretion system protein TraC | - |
| CJD41_RS24745 () | 59726..60109 | - | 384 | WP_000870325.1 | hypothetical protein | - |
| CJD41_RS24750 () | 60106..60573 | - | 468 | WP_000549559.1 | hypothetical protein | - |
| CJD41_RS24755 () | 60566..60787 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| CJD41_RS24760 () | 60922..61437 | - | 516 | WP_001746951.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CJD41_RS24765 () | 61434..61658 | - | 225 | WP_001746950.1 | DUF2689 domain-containing protein | - |
| CJD41_RS24770 () | 61636..62232 | - | 597 | WP_000527898.1 | conjugal transfer protein TraP | - |
| CJD41_RS24775 () | 62222..63643 | - | 1422 | WP_000146698.1 | conjugal transfer protein TraB | - |
| CJD41_RS24780 () | 63643..64383 | - | 741 | WP_015059453.1 | type-F conjugative transfer system secretin TraK | - |
| CJD41_RS24785 () | 64370..64936 | - | 567 | WP_000399760.1 | type IV conjugative transfer system protein TraE | - |
| CJD41_RS24790 () | 64958..65269 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| CJD41_RS24795 () | 65284..65646 | - | 363 | WP_001274202.1 | type IV conjugative transfer system pilin TraA | - |
| CJD41_RS24800 () | 65688..66083 | - | 396 | WP_001746564.1 | conjugal transfer relaxosome protein TraY | - |
| CJD41_RS24805 () | 66182..66871 | - | 690 | WP_001746563.1 | conjugal transfer transcriptional regulator TraJ | - |
| CJD41_RS24810 () | 67066..67446 | - | 381 | WP_001151568.1 | relaxosome protein TraM | - |
| CJD41_RS24815 () | 67869..68339 | + | 471 | WP_120116676.1 | transglycosylase SLT domain-containing protein | - |
| CJD41_RS24820 () | 68650..69468 | - | 819 | Protein_82 | DUF945 domain-containing protein | - |
| CJD41_RS24825 () | 69977..70633 | - | 657 | Protein_83 | plasmid SOS inhibition protein A | - |
| CJD41_RS24830 () | 70570..70758 | - | 189 | WP_001746557.1 | hypothetical protein | - |
| CJD41_RS24835 () | 70801..72784 | - | 1984 | Protein_85 | ParB/RepB/Spo0J family partition protein | - |
| CJD41_RS24840 () | 72853..72993 | - | 141 | Protein_86 | DUF905 family protein | - |
| CJD41_RS24845 () | 72995..73309 | - | 315 | Protein_87 | single-stranded DNA-binding protein SSB2 | - |
| CJD41_RS25145 () | 73903..74106 | - | 204 | WP_162926331.1 | hypothetical protein | - |
| CJD41_RS24865 () | 74070..74393 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| CJD41_RS24870 () | 74629..75063 | - | 435 | WP_000274534.1 | DUF1380 family protein | - |
| CJD41_RS24875 () | 75130..75564 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| CJD41_RS24885 () | 76060..76824 | - | 765 | WP_001747302.1 | hypothetical protein | - |
| CJD41_RS24890 () | 76896..77309 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| CJD41_RS24895 () | 77365..77586 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| CJD41_RS24900 () | 77586..78266 | - | 681 | WP_001747300.1 | DNA methylase | - |
| CJD41_RS24910 () | 78648..79004 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| CJD41_RS24915 () | 78997..79467 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| CJD41_RS24920 () | 79978..80400 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CJD41_RS24925 () | 80400..81674 | + | 1275 | WP_015059462.1 | Y-family DNA polymerase | - |
| CJD41_RS24930 () | 81756..82730 | - | 975 | WP_162926333.1 | ParB/RepB/Spo0J family partition protein | - |
| CJD41_RS24935 () | 82730..83935 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| CJD41_RS24940 () | 84350..85291 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CJD41_RS24945 () | 85323..85889 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| CJD41_RS24950 () | 85946..86281 | - | 336 | WP_001527010.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|