MGE detailed information
MGE type: Prophage MGE length: 41389 bp
Accession: NZ_CP022906 Location: 1906414..1947802 Organism: Staphylococcus aureus strain 546 Replicon: chromosome
Accession: NZ_CP022906 Location: 1906414..1947802 Organism: Staphylococcus aureus strain 546 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP99_RS09700 () | 1901478..1901963 | - | 486 | WP_000093392.1 | IS200/IS605 family transposase | - |
| CGP99_RS09705 () | 1902275..1902973 | - | 699 | WP_115276709.1 | S9 family peptidase | - |
| CGP99_RS09710 () | 1902978..1903451 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| CGP99_RS09715 () | 1903517..1903774 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| CGP99_RS09720 () | 1903771..1904772 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| CGP99_RS09725 () | 1904777..1906255 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| CGP99_RS09730 () | 1906414..1906869 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| CGP99_RS09735 () | 1907172..1907822 | + | 651 | Protein_1829 | excalibur calcium-binding domain-containing protein | - |
| CGP99_RS09740 () | 1907903..1908898 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| CGP99_RS09745 () | 1908974..1909600 | + | 627 | WP_000669046.1 | hypothetical protein | - |
| CGP99_RS09750 () | 1909641..1909985 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| CGP99_RS09755 () | 1910083..1910634 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| CGP99_RS09760 () | 1910852..1911493 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CGP99_RS09765 () | 1911607..1911792 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| CGP99_RS09770 () | 1911794..1911970 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| CGP99_RS09775 () | 1911981..1912364 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| CGP99_RS09785 () | 1912968..1913111 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| CGP99_RS09795 () | 1913314..1913409 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1913437..1913496 | - | 60 | - | - | Antitoxin Detail |
| CGP99_RS09800 () | 1913532..1913633 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| CGP99_RS09805 () | 1913611..1913787 | - | 177 | Protein_1841 | transposase | - |
| CGP99_RS09810 () | 1913981..1914358 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| CGP99_RS09815 () | 1914879..1915706 | - | 828 | Protein_1843 | ATP-binding protein | - |
| CGP99_RS09820 () | 1915756..1916928 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| CGP99_RS09830 () | 1917009..1920197 | - | 3189 | Protein_1845 | ATP-binding protein | - |
| CGP99_RS09835 () | 1921047..1922246 | - | 1200 | WP_000072576.1 | restriction endonuclease subunit S | - |
| CGP99_RS09840 () | 1922239..1923795 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| CGP99_RS09845 () | 1923959..1924093 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| CGP99_RS09850 () | 1924158..1924877 | - | 720 | WP_001038688.1 | Serine protease SplF | VF |
| CGP99_RS09855 () | 1925028..1925744 | - | 717 | WP_001038759.1 | Serine protease SplE | VF |
| CGP99_RS09860 () | 1925846..1925953 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| CGP99_RS09865 () | 1925902..1926621 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| CGP99_RS09870 () | 1926742..1927461 | - | 720 | WP_001038867.1 | Serine protease SplC | VF |
| CGP99_RS09875 () | 1927519..1928241 | - | 723 | WP_001039447.1 | Serine protease SplB | VF |
| CGP99_RS09880 () | 1928366..1929082 | - | 717 | WP_001039423.1 | Serine protease SplA | VF |
| CGP99_RS09890 () | 1930046..1930612 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| CGP99_RS09895 () | 1931086..1931784 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| CGP99_RS09900 () | 1931781..1932542 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| CGP99_RS09905 () | 1932539..1933231 | - | 693 | WP_001096791.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| CGP99_RS09910 () | 1933254..1934627 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| CGP99_RS09915 () | 1934637..1935155 | - | 519 | WP_000504439.1 | flavoprotein | - |
| CGP99_RS09920 () | 1935171..1936415 | - | 1245 | WP_115276657.1 | lanthionine synthetase C family protein | - |
| CGP99_RS09925 () | 1936408..1939401 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| CGP99_RS09930 () | 1939466..1939609 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| CGP99_RS09940 () | 1940346..1940489 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| CGP99_RS09945 () | 1940731..1941714 | - | 984 | WP_115276658.1 | Leucotoxin LukDv | VF |
| CGP99_RS09950 () | 1941716..1942651 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| CGP99_RS09955 () | 1943451..1943990 | + | 540 | WP_001790220.1 | hypothetical protein | - |
| CGP99_RS09960 () | 1944003..1944791 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| CGP99_RS15520 () | 1945252..1945460 | + | 209 | Protein_1870 | hypothetical protein | - |
| CGP99_RS10015 () | 1947248..1947802 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| CGP99_RS10025 () | 1948125..1949525 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| CGP99_RS10030 () | 1949549..1950472 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| CGP99_RS10035 () | 1950530..1951567 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| CGP99_RS10040 () | 1951557..1951667 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| CGP99_RS10045 () | 1951831..1952334 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA10024 | NC_009641 | 1882747..1922929 | 0.001 |