MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 143770 bp
Accession: NZ_CP022661 Location: 1..143770 Organism: Salmonella enterica subsp. enterica strain RM11065 Replicon: plasmid pRM11065-1
Accession: NZ_CP022661 Location: 1..143770 Organism: Salmonella enterica subsp. enterica strain RM11065 Replicon: plasmid pRM11065-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGA24_RS00010 () | 572..775 | - | 204 | WP_097361804.1 | PerC family transcriptional regulator | - |
| CGA24_RS00020 () | 1075..2154 | - | 1080 | WP_157764435.1 | hypothetical protein | - |
| CGA24_RS00025 () | 2194..4704 | - | 2511 | WP_097361807.1 | fimbrial biogenesis outer membrane usher protein | - |
| CGA24_RS00030 () | 4723..5427 | - | 705 | WP_097361808.1 | molecular chaperone | - |
| CGA24_RS00035 () | 5648..6199 | - | 552 | WP_097361809.1 | type 1 fimbrial protein | - |
| CGA24_RS00040 () | 6788..7162 | + | 375 | WP_097361810.1 | helix-turn-helix domain-containing protein | - |
| CGA24_RS00045 () | 7329..8357 | + | 1029 | WP_097361811.1 | IS110 family transposase | - |
| CGA24_RS00050 () | 8999..9537 | + | 539 | Protein_8 | transposase | - |
| CGA24_RS00055 () | 10226..10483 | + | 258 | WP_097361812.1 | hypothetical protein | - |
| CGA24_RS00065 () | 12245..12571 | - | 327 | Protein_10 | transposase | - |
| CGA24_RS00070 () | 12759..13444 | + | 686 | Protein_11 | IS3 family transposase | - |
| CGA24_RS00080 () | 14105..14263 | + | 159 | WP_097361815.1 | reverse transcriptase-like protein | - |
| CGA24_RS00085 () | 14276..14461 | + | 186 | Protein_13 | IS3 family transposase | - |
| CGA24_RS00090 () | 14588..16687 | - | 2100 | WP_097361816.1 | peptidase domain-containing ABC transporter | - |
| CGA24_RS00095 () | 16680..17954 | - | 1275 | WP_097361817.1 | HlyD family secretion protein | - |
| CGA24_RS00100 () | 19074..19646 | - | 573 | WP_097361818.1 | recombinase family protein | - |
| CGA24_RS00105 () | 19817..22825 | + | 3009 | Protein_17 | Tn3 family transposase | - |
| CGA24_RS27845 () | 22971..23120 | + | 150 | WP_198404652.1 | hypothetical protein | - |
| CGA24_RS00110 () | 23637..24554 | + | 918 | WP_097361906.1 | RepB family plasmid replication initiator protein | - |
| CGA24_RS00115 () | 24601..25803 | + | 1203 | WP_097361819.1 | IS256 family transposase | - |
| CGA24_RS00120 () | 26286..26855 | - | 570 | WP_097361820.1 | LemA family protein | - |
| CGA24_RS00125 () | 26855..27922 | - | 1068 | WP_097361821.1 | hypothetical protein | - |
| CGA24_RS00130 () | 28262..29176 | + | 915 | WP_097361822.1 | EamA family transporter RarD | - |
| CGA24_RS00135 () | 29269..30609 | - | 1341 | WP_097361823.1 | hypothetical protein | - |
| CGA24_RS00140 () | 31753..32772 | - | 1020 | WP_097361907.1 | replication initiation protein | - |
| CGA24_RS00145 () | 33719..34264 | + | 546 | WP_001019660.1 | hypothetical protein | - |
| CGA24_RS00150 () | 34489..35103 | + | 615 | WP_079915660.1 | hypothetical protein | - |
| CGA24_RS00155 () | 35167..35376 | + | 210 | WP_023239350.1 | TraR/DksA family transcriptional regulator | - |
| CGA24_RS00160 () | 35388..35582 | + | 195 | WP_001188429.1 | hypothetical protein | - |
| CGA24_RS00165 () | 35579..36085 | + | 507 | WP_097361824.1 | hypothetical protein | - |
| CGA24_RS00170 () | 36163..37137 | + | 975 | WP_097361825.1 | TcpQ domain-containing protein | - |
| CGA24_RS00175 () | 37137..37568 | + | 432 | WP_001128317.1 | type IV pilus biogenesis protein PilM | - |
| CGA24_RS00180 () | 37583..39205 | + | 1623 | WP_079915638.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CGA24_RS00185 () | 39210..40493 | + | 1284 | WP_097361826.1 | type 4b pilus protein PilO2 | - |
| CGA24_RS00190 () | 40480..41016 | + | 537 | WP_097361827.1 | type IV pilus biogenesis protein PilP | - |
| CGA24_RS00195 () | 41048..42547 | + | 1500 | WP_097361828.1 | Flp pilus assembly complex ATPase component TadA | - |
| CGA24_RS00200 () | 42540..43655 | + | 1116 | WP_023229157.1 | type II secretion system F family protein | - |
| CGA24_RS00205 () | 43682..44275 | + | 594 | WP_097361829.1 | prepilin | - |
| CGA24_RS00210 () | 44289..44759 | + | 471 | WP_000279780.1 | lytic transglycosylase domain-containing protein | - |
| CGA24_RS00215 () | 44759..45370 | + | 612 | WP_097361830.1 | prepilin peptidase | - |
| CGA24_RS00220 () | 45472..46776 | + | 1305 | WP_097361831.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CGA24_RS00230 () | 47255..48409 | + | 1155 | WP_097361833.1 | site-specific integrase | - |
| CGA24_RS00235 () | 48531..48986 | + | 456 | WP_097361834.1 | DotD/TraH family lipoprotein | - |
| CGA24_RS00240 () | 49052..49804 | + | 753 | WP_198404653.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CGA24_RS00245 () | 49801..50970 | + | 1170 | WP_097361836.1 | plasmid transfer ATPase TraJ | - |
| CGA24_RS00250 () | 50960..51226 | + | 267 | WP_079896959.1 | IcmT/TraK family protein | - |
| CGA24_RS00255 () | 51238..53706 | + | 2469 | WP_097361837.1 | hypothetical protein | - |
| CGA24_RS00260 () | 53788..54681 | + | 894 | WP_097361838.1 | hypothetical protein | - |
| CGA24_RS00265 () | 54697..55167 | + | 471 | WP_097361839.1 | hypothetical protein | - |
| CGA24_RS00270 () | 55229..55906 | + | 678 | WP_097361908.1 | DotI/IcmL/TraM family protein | - |
| CGA24_RS00275 () | 55903..56931 | + | 1029 | WP_097361840.1 | conjugal transfer protein TraN | - |
| CGA24_RS00280 () | 56931..58133 | + | 1203 | WP_097361841.1 | conjugal transfer protein TraO | - |
| CGA24_RS00285 () | 58130..58885 | + | 756 | WP_097361842.1 | hypothetical protein | - |
| CGA24_RS00290 () | 58895..59425 | + | 531 | WP_001627966.1 | conjugal transfer protein TraQ | - |
| CGA24_RS00295 () | 59441..59839 | + | 399 | WP_001627967.1 | hypothetical protein | - |
| CGA24_RS00300 () | 59897..60349 | + | 453 | WP_097361843.1 | hypothetical protein | - |
| CGA24_RS00305 () | 60454..60720 | + | 267 | WP_080067605.1 | hypothetical protein | - |
| CGA24_RS00310 () | 60813..61421 | + | 609 | WP_097361844.1 | hypothetical protein | - |
| CGA24_RS00315 () | 61418..64480 | + | 3063 | WP_097361845.1 | conjugal transfer protein | - |
| CGA24_RS00320 () | 64499..65725 | + | 1227 | WP_097361846.1 | conjugal transfer protein TraW | - |
| CGA24_RS00325 () | 65722..66240 | + | 519 | WP_097361847.1 | conjugal transfer protein TraX | - |
| CGA24_RS00330 () | 66292..68424 | + | 2133 | WP_097361848.1 | DotA/TraY family protein | - |
| CGA24_RS00335 () | 68435..68986 | + | 552 | WP_097361849.1 | hypothetical protein | - |
| CGA24_RS00340 () | 69088..69603 | - | 516 | WP_097361850.1 | GNAT family N-acetyltransferase | - |
| CGA24_RS00345 () | 69587..69916 | - | 330 | WP_115287892.1 | DUF1778 domain-containing protein | - |
| CGA24_RS00350 () | 70352..71005 | + | 654 | WP_023208032.1 | hypothetical protein | - |
| CGA24_RS00355 () | 71701..72966 | + | 1266 | WP_097361851.1 | conjugal transfer protein TrbA | - |
| CGA24_RS00360 () | 73019..74041 | + | 1023 | WP_097361852.1 | thioredoxin fold domain-containing protein | - |
| CGA24_RS00365 () | 74094..74987 | + | 894 | Protein_69 | conjugal transfer protein TrbC | - |
| CGA24_RS27520 () | 75005..75163 | + | 159 | WP_157764436.1 | hypothetical protein | - |
| CGA24_RS00375 () | 75735..75896 | - | 162 | WP_000775478.1 | type I toxin-antitoxin system Hok family toxin | - |
| CGA24_RS00380 () | 76113..76439 | - | 327 | WP_097361853.1 | theronine dehydrogenase | - |
| CGA24_RS00385 () | 76436..77164 | - | 729 | WP_097361854.1 | plasmid SOS inhibition protein A | - |
| CGA24_RS00390 () | 77161..77595 | - | 435 | WP_097361855.1 | conjugation system SOS inhibitor PsiB | - |
| CGA24_RS00395 () | 77636..79681 | - | 2046 | WP_097361856.1 | ParB/RepB/Spo0J family partition protein | - |
| CGA24_RS00400 () | 79753..79995 | - | 243 | WP_097361857.1 | DUF905 domain-containing protein | - |
| CGA24_RS00405 () | 80050..80601 | - | 552 | WP_097361909.1 | single-stranded DNA-binding protein SSB2 | - |
| CGA24_RS00410 () | 80582..80890 | - | 309 | WP_024153761.1 | hypothetical protein | - |
| CGA24_RS00415 () | 81360..81923 | - | 564 | WP_097361858.1 | class I SAM-dependent methyltransferase | - |
| CGA24_RS00420 () | 81970..83316 | - | 1347 | WP_198404654.1 | DUF3560 domain-containing protein | - |
| CGA24_RS00425 () | 83404..83634 | - | 231 | WP_097361860.1 | hypothetical protein | - |
| CGA24_RS00430 () | 83727..83954 | - | 228 | WP_097361861.1 | hypothetical protein | - |
| CGA24_RS00435 () | 84644..84998 | - | 355 | Protein_83 | DNA polymerase III subunit theta | - |
| CGA24_RS00440 () | 85169..85360 | - | 192 | WP_057064198.1 | hypothetical protein | - |
| CGA24_RS00445 () | 85374..85784 | - | 411 | WP_097361862.1 | DUF1380 family protein | - |
| CGA24_RS00450 () | 85828..86250 | - | 423 | WP_023228558.1 | DUF1380 family protein | - |
| CGA24_RS00455 () | 86344..86745 | - | 402 | WP_097361863.1 | antirestriction protein | - |
| CGA24_RS00465 () | 87163..87930 | - | 768 | WP_097361864.1 | hypothetical protein | - |
| CGA24_RS00470 () | 87998..88402 | - | 405 | WP_097361865.1 | DUF1380 family protein | - |
| CGA24_RS00475 () | 88458..88877 | - | 420 | WP_097361866.1 | DUF1380 domain-containing protein | - |
| CGA24_RS00480 () | 88888..89109 | - | 222 | WP_079939536.1 | hypothetical protein | - |
| CGA24_RS00485 () | 89109..89789 | - | 681 | WP_097361867.1 | DNA methylase | - |
| CGA24_RS27850 () | 89972..90133 | + | 162 | WP_198404648.1 | hypothetical protein | - |
| CGA24_RS00495 () | 90166..90513 | - | 348 | WP_097361869.1 | hypothetical protein | - |
| CGA24_RS00500 () | 90546..91481 | - | 936 | WP_097361870.1 | DUF1281 domain-containing protein | - |
| CGA24_RS00505 () | 92021..92443 | + | 423 | WP_097361871.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CGA24_RS00510 () | 92443..92670 | + | 228 | Protein_97 | DNA polymerase V subunit UmuC | - |
| CGA24_RS00515 () | 92773..93720 | + | 948 | WP_097361910.1 | site-specific integrase | - |
| CGA24_RS00520 () | 93731..95866 | + | 2136 | WP_097361872.1 | tyrosine-type recombinase/integrase | - |
| CGA24_RS00525 () | 95955..96995 | + | 1041 | Protein_100 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CGA24_RS00530 () | 96999..97388 | - | 390 | WP_097361873.1 | plasmid partitioning/stability family protein | - |
| CGA24_RS00535 () | 97393..98367 | - | 975 | WP_097361874.1 | plasmid segregation protein parM | - |
| CGA24_RS00540 () | 98651..99049 | - | 399 | WP_080077575.1 | hypothetical protein | - |
| CGA24_RS00545 () | 99052..99681 | - | 630 | WP_042313791.1 | ParA family protein | - |
| CGA24_RS00550 () | 100101..100352 | + | 252 | WP_097361875.1 | hypothetical protein | - |
| CGA24_RS00555 () | 100960..101151 | + | 192 | WP_097361876.1 | glycogen synthase | - |
| CGA24_RS00560 () | 101374..102030 | - | 657 | WP_080077616.1 | MgtC/SapB family protein | - |
| CGA24_RS00565 () | 102487..103485 | - | 999 | WP_097361877.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| CGA24_RS00570 () | 103637..104344 | + | 708 | WP_097361878.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CGA24_RS00575 () | 104377..105678 | + | 1302 | WP_097361879.1 | four-carbon acid sugar kinase family protein | - |
| CGA24_RS00580 () | 105701..106699 | + | 999 | WP_097361880.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| CGA24_RS00585 () | 106738..108288 | + | 1551 | WP_097361881.1 | gluconate permease | - |
| CGA24_RS00590 () | 108502..109284 | - | 783 | WP_097361882.1 | site-specific integrase | - |
| CGA24_RS00595 () | 109281..109715 | - | 435 | WP_097361883.1 | hypothetical protein | - |
| CGA24_RS00600 () | 109812..110093 | - | 282 | WP_097361884.1 | cytoplasmic protein | - |
| CGA24_RS00605 () | 110095..110400 | - | 306 | WP_097361885.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CGA24_RS00610 () | 110402..110620 | - | 219 | WP_097361886.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CGA24_RS00615 () | 111186..111800 | + | 615 | WP_097361887.1 | DNA-binding protein | - |
| CGA24_RS00620 () | 112157..112384 | - | 228 | Protein_119 | integrase | - |
| CGA24_RS00625 () | 112588..112812 | + | 225 | Protein_120 | antitermination protein | - |
| CGA24_RS00630 () | 113521..114086 | + | 566 | Protein_121 | transposase | - |
| CGA24_RS00635 () | 114165..114569 | - | 405 | WP_097361888.1 | transposase | - |
| CGA24_RS00645 () | 114949..115242 | - | 294 | WP_198404649.1 | hypothetical protein | - |
| CGA24_RS00650 () | 115671..116609 | - | 939 | WP_097361889.1 | DUF3491 domain-containing protein | - |
| CGA24_RS00655 () | 116708..120832 | - | 4125 | WP_097361890.1 | DUF3491 domain-containing protein | - |
| CGA24_RS00660 () | 120928..128340 | - | 7413 | WP_198404650.1 | hypothetical protein | - |
| CGA24_RS00680 () | 128570..129085 | + | 516 | Protein_127 | recombinase family protein | - |
| CGA24_RS00685 () | 129120..129374 | + | 255 | WP_097361895.1 | hypothetical protein | - |
| CGA24_RS00690 () | 129560..130432 | + | 873 | WP_097361896.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CGA24_RS00695 () | 130710..131477 | - | 768 | WP_097361897.1 | site-specific integrase | - |
| CGA24_RS00700 () | 131842..132138 | - | 297 | WP_097361898.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CGA24_RS00705 () | 132125..132391 | - | 267 | WP_097361899.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| CGA24_RS27530 () | 132904..134076 | + | 1173 | WP_198404651.1 | ISNCY family transposase | - |
| CGA24_RS00720 () | 134394..134967 | - | 574 | Protein_134 | recombinase family protein | - |
| CGA24_RS00725 () | 135474..135764 | + | 291 | WP_097361900.1 | hypothetical protein | - |
| CGA24_RS00730 () | 135875..137077 | + | 1203 | WP_097361819.1 | IS256 family transposase | - |
| CGA24_RS00735 () | 137388..138407 | + | 1020 | WP_097361901.1 | IS630 family transposase | - |
| CGA24_RS00740 () | 138575..139429 | - | 855 | WP_157764439.1 | AraC family transcriptional regulator | - |
| CGA24_RS00745 () | 140316..141179 | - | 864 | WP_157764440.1 | AraC family transcriptional regulator | - |
| CGA24_RS00755 () | 141563..141679 | + | 117 | Protein_140 | transposase | - |
| CGA24_RS00760 () | 141905..142921 | - | 1017 | WP_097361905.1 | IS110 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|