Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) prpT-prpA/ParE-CC2985
Location 131842..132391 Replicon plasmid pRM11065-1
Accession NZ_CP022661
Organism Salmonella enterica subsp. enterica strain RM11065

Toxin (Protein)


Gene name PrpT Uniprot ID -
Locus tag CGA24_RS00700 Protein ID WP_097361898.1
Coordinates 131842..132138 (-) Length 99 a.a.

Antitoxin (Protein)


Gene name PrpA Uniprot ID -
Locus tag CGA24_RS00705 Protein ID WP_097361899.1
Coordinates 132125..132391 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CGA24_RS00680 128570..129085 + 516 Protein_127 recombinase family protein -
CGA24_RS00685 129120..129374 + 255 WP_097361895.1 hypothetical protein -
CGA24_RS00690 129560..130432 + 873 WP_097361896.1 Rpn family recombination-promoting nuclease/putative transposase -
CGA24_RS00695 130710..131477 - 768 WP_097361897.1 site-specific integrase -
CGA24_RS00700 131842..132138 - 297 WP_097361898.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
CGA24_RS00705 132125..132391 - 267 WP_097361899.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin
CGA24_RS27530 132904..134076 + 1173 WP_198404651.1 ISNCY family transposase -
CGA24_RS00720 134394..134967 - 574 Protein_134 recombinase family protein -
CGA24_RS00725 135474..135764 + 291 WP_097361900.1 hypothetical protein -
CGA24_RS00730 135875..137077 + 1203 WP_097361819.1 IS256 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..143770 143770


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

PIN domain

(2-110)

Antitoxin

Bacterial antitoxin of type II TA system, VapB

(1-42)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 14588.50 Da        Isoelectric Point: 5.5500

>T79453 WP_097361898.1 NZ_CP022661:c132138-131842 [Salmonella enterica subsp. enterica]
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFFFFFFFFFFFF

Download         Length: 297 bp

>T79453 NZ_CP022661:c132138-131842 [Salmonella enterica subsp. enterica]
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
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TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 13116.73 Da        Isoelectric Point: 5.5500

>AT79453 WP_097361899.1 NZ_CP022661:c132391-132125 [Salmonella enterica subsp. enterica]
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFF

Download         Length: 267 bp

>AT79453 NZ_CP022661:c132391-132125 [Salmonella enterica subsp. enterica]
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References