MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP022578 Location: 4160940..4165882 Organism: Mycobacterium tuberculosis strain WC059 Replicon: chromosome
Accession: NZ_CP022578 Location: 4160940..4165882 Organism: Mycobacterium tuberculosis strain WC059 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CHR52_RS20365 () | 4156846..4157556 | - | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
CHR52_RS20370 () | 4157630..4158502 | + | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
CHR52_RS20375 () | 4158573..4160750 | - | 2178 | WP_016330440.1 | PE family protein | - |
CHR52_RS20380 () | 4160940..4162281 | - | 1342 | Protein_3858 | ISNCY family transposase ISMav10 | Transposase |
CHR52_RS20385 () | 4162460..4162768 | + | 309 | WP_003417918.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
CHR52_RS20390 () | 4162768..4163160 | + | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
CHR52_RS20395 () | 4163914..4164579 | + | 666 | Protein_3861 | polyprenyl synthetase family protein | - |
CHR52_RS20405 () | 4165935..4166324 | + | 390 | Protein_3863 | polyprenyl synthetase family protein | - |
CHR52_RS20410 () | 4166324..4167313 | + | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
CHR52_RS20415 () | 4167310..4169148 | + | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
CHR52_RS20420 () | 4169157..4170047 | + | 891 | WP_003417908.1 | diterpene synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |