NZ_CP0223591..193338

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 193338 bp
Accession: NZ_CP022359        Location: 1..193338         Organism: Shewanella bicestrii strain JAB-1       Replicon: plasmid pSHE-CTX-M


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CF168_RS22410 () 241..384 + 144 WP_001275801.1 hypothetical protein -
CF168_RS20990 () 384..761 + 378 WP_000509509.1 hypothetical protein -
CF168_RS20995 () 906..1187 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
CF168_RS21000 () 1184..1810 + 627 WP_001049716.1 hypothetical protein -
CF168_RS21005 () 1794..2711 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
CF168_RS21010 () 2711..4024 + 1314 WP_024131605.1 conjugal transfer protein TraB -
CF168_RS21015 () 4021..4599 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
CF168_RS21020 () 4603..4995 + 393 WP_000479535.1 hypothetical protein -
CF168_RS21025 () 5196..10727 + 5532 WP_000606833.1 DUF4165 domain-containing protein -
CF168_RS21030 () 10876..11583 + 708 WP_001259347.1 DsbC family protein -
CF168_RS21035 () 11580..14027 + 2448 WP_000637386.1 type IV secretion system protein TraC -
CF168_RS21040 () 14042..14359 + 318 WP_000351984.1 hypothetical protein -
CF168_RS21045 () 14356..14886 + 531 WP_001010738.1 S26 family signal peptidase -
CF168_RS21050 () 14849..16114 + 1266 WP_000621288.1 conjugal transfer protein TraW -
CF168_RS21055 () 16111..16782 + 672 WP_001337754.1 EAL domain-containing protein -
CF168_RS21060 () 16779..17786 + 1008 WP_000983283.1 TraU family protein -
CF168_RS21065 () 17890..20700 + 2811 WP_001909286.1 conjugal transfer mating pair stabilization protein TraN -
CF168_RS21070 () 20739..21599 - 861 WP_000709517.1 hypothetical protein -
CF168_RS21075 () 21722..22363 - 642 WP_000796664.1 hypothetical protein -
CF168_RS21080 () 22657..22977 + 321 WP_000547566.1 hypothetical protein -
CF168_RS21085 () 23281..23466 + 186 WP_001186917.1 hypothetical protein -
CF168_RS21090 () 23686..24654 + 969 WP_000085162.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
CF168_RS21095 () 24665..25573 + 909 WP_000739139.1 hypothetical protein -
CF168_RS21100 () 25634..26164 + 531 WP_000987165.1 single-stranded DNA-binding protein -
CF168_RS21105 () 26259..27248 + 990 WP_001282585.1 phage recombination protein Bet -
CF168_RS21110 () 27311..28321 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
CF168_RS21115 () 28521..29798 + 1278 WP_000170086.1 DUF3150 domain-containing protein -
CF168_RS21120 () 29883..31679 + 1797 WP_000039318.1 VWA domain-containing protein -
CF168_RS21125 () 31741..32076 + 336 WP_001071288.1 hypothetical protein -
CF168_RS21130 () 32341..32880 + 540 WP_000018872.1 hypothetical protein -
CF168_RS21135 () 32971..33471 + 501 WP_000793769.1 hypothetical protein -
CF168_RS21140 () 33545..34429 + 885 WP_000477209.1 hypothetical protein -
CF168_RS21145 () 34495..34719 + 225 WP_001102700.1 2Fe-2S ferredoxin-like protein -
CF168_RS21150 () 34781..35170 + 390 WP_000026577.1 hypothetical protein -
CF168_RS21155 () 35160..35612 + 453 WP_001176699.1 hypothetical protein -
CF168_RS21165 () 36184..37233 + 1050 Protein_36 IS1380 family transposase ISEcp1 Transposase
CF168_RS21170 () 37257..38462 - 1206 WP_089066614.1 IS256 family transposase ISSod5 Transposase
CF168_RS21175 () 38521..38748 + 228 Protein_38 IS1380 family transposase ISEcp1 Transposase
CF168_RS21180 () 39004..39879 + 876 WP_000239590.1 Beta-lactamase CTX-M-1 ARG
CF168_RS21185 () 39926..40258 - 333 WP_001393253.1 WbuC family cupin fold metalloprotein -
CF168_RS21190 () 40272..42515 + 2244 Protein_41 Tn3 family transposase TnpA_Tn3 Transposase
CF168_RS21195 () 42580..43284 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CF168_RS21200 () 43338..44386 - 1049 Protein_43 IS3 family transposase ISKpn11 Transposase
CF168_RS21205 () 44478..45020 - 543 WP_002063889.1 AAA family ATPase -
CF168_RS21210 () 45033..45893 - 861 WP_000557452.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
CF168_RS21220 () 46000..46704 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CF168_RS21225 () 46758..47198 - 441 Protein_47 CatB-related O-acetyltransferase -
CF168_RS21230 () 47336..48166 - 831 WP_001334766.1 Beta-lactamase OXA-1 ARG
CF168_RS21235 () 48297..48851 - 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
CF168_RS21240 () 48995..49699 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CF168_RS21250 () 49765..51279 + 1515 Protein_51 Tn3 family transposase TnpA_TnAs1 Transposase
CF168_RS21255 () 51321..51563 + 243 WP_032140899.1 hypothetical protein -
CF168_RS21260 () 51595..52245 - 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
CF168_RS21265 () 52351..53550 + 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
CF168_RS21270 () 53582..54466 - 885 WP_000058717.1 EamA family transporter -
CF168_RS21275 () 54604..55011 - 408 WP_001214976.1 cysteine hydrolase -
CF168_RS21280 () 55000..55749 + 750 Protein_57 Tn3 family transposase TnpA_TnAs1 Transposase
CF168_RS21285 () 55773..56378 - 606 WP_000509965.1 Tn3 family transposase TnpR_Tn5403 Transposase
CF168_RS21290 () 56473..56766 + 294 Protein_59 Tn3 family transposase TnpA_Tn5403 Transposase
CF168_RS21295 () 56925..57302 + 378 WP_001337696.1 hypothetical protein -
CF168_RS21300 () 57494..57838 + 345 WP_000209093.1 hypothetical protein -
CF168_RS21305 () 57916..58218 + 303 WP_000410925.1 hypothetical protein -
CF168_RS21310 () 58296..59921 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
CF168_RS21315 () 59982..60413 + 432 WP_000687894.1 hypothetical protein -
CF168_RS21320 () 60487..61041 + 555 WP_001093868.1 hypothetical protein -
CF168_RS21325 () 61274..61660 + 387 WP_000042274.1 hypothetical protein -
CF168_RS21330 () 61748..64201 + 2454 WP_001187970.1 phosphoadenosine phosphosulfate reductase -
CF168_RS21335 () 64403..64606 + 204 WP_000050848.1 hypothetical protein -
CF168_RS21340 () 64678..65283 + 606 WP_000071870.1 5'-deoxynucleotidase -
CF168_RS21345 () 65276..65545 + 270 WP_000184110.1 hypothetical protein -
CF168_RS21350 () 65559..65777 + 219 WP_000260293.1 hypothetical protein -
CF168_RS21355 () 65851..66408 + 558 WP_000064431.1 pyruvate dehydrogenase -
CF168_RS21360 () 66483..67334 + 852 WP_000595210.1 hypothetical protein -
CF168_RS22415 () 67539..67685 + 147 WP_001032042.1 hypothetical protein -
CF168_RS21365 () 67792..68178 + 387 WP_001077335.1 hypothetical protein -
CF168_RS21370 () 68356..70083 + 1728 WP_000122923.1 toprim domain-containing protein -
CF168_RS21375 () 70070..70348 + 279 WP_000268337.1 hypothetical protein -
CF168_RS21380 () 70421..70660 + 240 WP_000714162.1 permease -
CF168_RS22420 () 70670..70786 + 117 WP_000338626.1 hypothetical protein -
CF168_RS21385 () 70907..71281 + 375 WP_000868821.1 hypothetical protein -
CF168_RS21390 () 71395..72120 + 726 WP_000988732.1 hypothetical protein -
CF168_RS21400 () 72361..76515 + 4155 WP_167373724.1 Putative deoxyribonuclease RhsC VF
CF168_RS21405 () 76512..76784 + 273 WP_000787563.1 MafI family immunity protein -
CF168_RS21415 () 77080..77379 + 300 WP_011872911.1 hypothetical protein -
CF168_RS21420 () 77814..78158 - 345 WP_089069021.1 hypothetical protein -
CF168_RS21425 () 78218..81184 - 2967 WP_001138014.1 Tn3 family transposase TnpA_TnAs1 Transposase
CF168_RS21430 () 81188..81748 - 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
CF168_RS21440 () 82209..83237 + 1029 WP_011711660.1 IS30 family transposase ISShes10 Transposase
CF168_RS21445 () 83311..83787 + 477 WP_011711661.1 DM13 domain-containing protein -
CF168_RS21450 () 84195..84650 - 456 WP_001166628.1 IS607 family transposase ISChh1 Transposase
CF168_RS21455 () 84722..85117 + 396 WP_001294653.1 mercuric ion transporter MerT -
CF168_RS21460 () 85133..85408 + 276 WP_000732275.1 mercury resistance system periplasmic binding protein MerP -
CF168_RS21465 () 85436..85861 + 426 WP_000522996.1 organomercurial transporter MerC -
CF168_RS21470 () 85900..87585 + 1686 WP_000209296.1 mercury(II) reductase -
CF168_RS21475 () 87603..87968 + 366 WP_001277466.1 mercury resistance co-regulator MerD -
CF168_RS21480 () 87965..88201 + 237 WP_001087807.1 broad-spectrum mercury transporter MerE -
CF168_RS21490 () 88267..88479 + 213 WP_000993245.1 DUF3330 domain-containing protein -
CF168_RS21495 () 88802..89089 - 288 Protein_98 IS1182 family transposase ISCps6 Transposase
CF168_RS21500 () 89185..89757 - 573 WP_011711651.1 peptide-methionine (S)-S-oxide reductase -
CF168_RS21505 () 89754..90254 - 501 WP_011711652.1 Peptide methionine sulfoxide reductase MsrA 3 VF
CF168_RS21510 () 90257..90703 - 447 WP_011711653.1 Peptide methionine sulfoxide reductase MsrB VF
CF168_RS21515 () 90940..91455 - 516 WP_011711654.1 DUF417 family protein -
CF168_RS21520 () 91593..92147 - 555 WP_000088799.1 carboxymuconolactone decarboxylase family protein -
CF168_RS22360 () 92290..92367 - 78 Protein_104 peptide-methionine (S)-S-oxide reductase -
CF168_RS21530 () 93236..94522 + 1287 WP_089069022.1 hypothetical protein -
CF168_RS21535 () 95140..96117 + 978 WP_002119794.1 sensor domain-containing diguanylate cyclase -
CF168_RS21540 () 96337..96999 - 663 WP_001281573.1 peptide-methionine (S)-S-oxide reductase -
CF168_RS21545 () 97205..97450 - 246 WP_011711656.1 hypothetical protein -
CF168_RS21550 () 97505..97945 - 441 WP_005403705.1 Peptide methionine sulfoxide reductase MsrB VF
CF168_RS21555 () 97977..98237 - 261 WP_005403706.1 glutaredoxin -
CF168_RS21560 () 98241..98729 - 489 WP_069785042.1 Peptide methionine sulfoxide reductase MsrA 3 VF
CF168_RS21565 () 98852..99787 + 936 WP_002123001.1 RCS-specific HTH-type transcriptional activator RclR VF
CF168_RS21570 () 99790..100530 + 741 WP_004911216.1 hypothetical protein -
CF168_RS21585 () 102466..104043 + 1578 WP_089069024.1 Aerotaxis receptor VF
CF168_RS21590 () 104576..104920 - 345 WP_089069021.1 hypothetical protein -
CF168_RS21595 () 104944..105561 - 618 WP_089069025.1 hypothetical protein -
CF168_RS21600 () 105571..106284 - 714 WP_089069026.1 HupE/UreJ family protein -
CF168_RS21605 () 106340..109468 - 3129 WP_089069027.1 CusA/CzcA family heavy metal efflux RND transporter -
CF168_RS21610 () 109480..110718 - 1239 WP_089069028.1 efflux RND transporter periplasmic adaptor subunit -
CF168_RS21615 () 110720..111997 - 1278 WP_089069029.1 TolC family protein -
CF168_RS21620 () 112045..112437 - 393 WP_089069030.1 hypothetical protein -
CF168_RS21625 () 112529..112879 - 351 WP_089069031.1 DUF3147 family protein -
CF168_RS21630 () 113177..114157 - 981 WP_089069032.1 Tn3 family transposase tnpT_TnXax1 Transposase
CF168_RS21635 () 114435..114704 + 270 WP_089069033.1 ribbon-helix-helix protein, CopG family Antitoxin Detail
CF168_RS21640 () 114704..114979 + 276 WP_089069034.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
CF168_RS21645 () 114982..116169 + 1188 WP_089069035.1 hypothetical protein -
CF168_RS21650 () 116175..117113 + 939 WP_089069036.1 Tn3 family transposase TnpR_ISPa43 Transposase
CF168_RS21655 () 117217..120222 + 3006 WP_089069037.1 Tn3 family transposase TnpA_Tn3 Transposase
CF168_RS22365 () 120297..120653 + 357 Protein_130 hypothetical protein -
CF168_RS21665 () 120669..121271 - 603 WP_000278322.1 hypothetical protein -
CF168_RS21670 () 121533..121814 + 282 WP_000575657.1 hypothetical protein -
CF168_RS21680 () 122113..122649 + 537 WP_000949433.1 hypothetical protein -
CF168_RS21685 () 122652..123662 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
CF168_RS21690 () 123667..124536 + 870 WP_000997323.1 3'-5' exonuclease -
CF168_RS21695 () 124533..125024 + 492 WP_000139717.1 hypothetical protein -
CF168_RS21700 () 125351..126226 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
CF168_RS21705 () 126397..127437 + 1041 WP_000101568.1 DNA-binding protein -
CF168_RS21715 () 127724..129235 + 1512 WP_000811656.1 ATP-dependent helicase -
CF168_RS21720 () 129346..130386 + 1041 WP_001326396.1 conjugal transfer protein TraF -
CF168_RS21725 () 130388..131821 + 1434 WP_000256129.1 conjugal transfer protein TraH -
CF168_RS21730 () 131834..135448 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
CF168_RS21735 () 135486..135848 - 363 WP_000683483.1 hypothetical protein -
CF168_RS21740 () 136564..136836 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
CF168_RS21745 () 136836..137369 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
CF168_RS21750 () 137380..137988 + 609 WP_000891157.1 hypothetical protein -
CF168_RS21755 () 137985..138536 + 552 WP_001020646.1 hypothetical protein -
CF168_RS21760 () 138596..139015 - 420 WP_000651490.1 H-NS histone family protein -
CF168_RS21765 () 139017..139310 - 294 WP_000919078.1 hypothetical protein -
CF168_RS21770 () 139327..140310 - 984 WP_000077458.1 ParM/StbA family protein -
CF168_RS21775 () 140809..141348 + 540 WP_001447712.1 hypothetical protein -
CF168_RS21780 () 141353..141640 + 288 WP_000127321.1 hypothetical protein -
CF168_RS21785 () 141625..142725 + 1101 WP_000350011.1 plasmid replication protein -
CF168_RS22440 () 143511..143675 + 165 WP_014342194.1 hypothetical protein -
CF168_RS21800 () 143762..144196 - 435 WP_000883925.1 hypothetical protein -
CF168_RS21805 () 144214..145329 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
CF168_RS21810 () 145598..146206 + 609 WP_000849071.1 hypothetical protein -
CF168_RS21815 () 146211..146732 + 522 WP_000393785.1 hypothetical protein -
CF168_RS21820 () 146735..147256 + 522 WP_000805800.1 hypothetical protein -
CF168_RS21825 () 147353..147826 + 474 WP_000057877.1 hypothetical protein -
CF168_RS21830 () 147837..148130 + 294 WP_001370730.1 hypothetical protein -
CF168_RS21835 () 148135..148989 + 855 WP_000539392.1 hypothetical protein -
CF168_RS21840 () 148989..149948 + 960 WP_000829616.1 S49 family peptidase -
CF168_RS21845 () 149964..150824 + 861 WP_000139698.1 DsbA family protein -
CF168_RS21850 () 150858..151286 + 429 WP_000591074.1 hypothetical protein -
CF168_RS21855 () 151343..151702 + 360 WP_000422768.1 hypothetical protein -
CF168_RS21860 () 151702..152148 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
CF168_RS21865 () 152145..152663 + 519 WP_000210756.1 nitrite reductase -
CF168_RS21870 () 152663..152893 + 231 WP_000972663.1 hypothetical protein -
CF168_RS21875 () 152880..153737 + 858 WP_001167032.1 hypothetical protein -
CF168_RS21885 () 153968..154495 + 528 WP_001236377.1 thermonuclease family protein -
CF168_RS21890 () 154553..154825 + 273 WP_001043047.1 HU family DNA-binding protein -
CF168_RS21895 () 154913..155206 + 294 WP_001239997.1 chromosome segregation protein ParM -
CF168_RS21900 () 155233..155535 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
CF168_RS21905 () 155540..155890 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
CF168_RS21910 () 156053..156601 + 549 WP_001061574.1 transcriptional regulator -
CF168_RS21920 () 156942..157136 + 195 WP_000343597.1 hypothetical protein -
CF168_RS21925 () 157147..157518 + 372 WP_000516916.1 hypothetical protein -
CF168_RS21930 () 157511..157981 + 471 WP_001281821.1 hypothetical protein -
CF168_RS21935 () 157996..158331 - 336 WP_000683476.1 hypothetical protein -
CF168_RS21940 () 158428..158916 + 489 WP_167373725.1 DUF1643 domain-containing protein -
CF168_RS21945 () 158919..159416 + 498 WP_000062185.1 hypothetical protein -
CF168_RS21950 () 159631..160335 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CF168_RS21960 () 160472..161332 + 861 WP_032488413.1 Beta-lactamase SHV-2 ARG
CF168_RS21965 () 161353..162114 - 762 WP_002210513.1 DeoR/GlpR family DNA-binding transcription regulator -
CF168_RS21970 () 162442..163626 - 1185 Protein_186 Methyl-accepting chemotaxis protein McpQ VF
CF168_RS21980 () 163692..164396 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CF168_RS22370 () 164402..164542 + 141 WP_001044210.1 hypothetical protein -
CF168_RS21990 () 165028..165765 + 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
CF168_RS21995 () 165762..165986 + 225 WP_000743213.1 hypothetical protein -
CF168_RS22000 () 166197..166385 + 189 Protein_191 IS91 family transposase -
CF168_RS22005 () 166352..167551 - 1200 WP_000804063.1 Tetracycline resistance protein, class C ARG
CF168_RS22010 () 167657..168307 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
CF168_RS22015 () 168339..168581 - 243 WP_000844627.1 transposase -
CF168_RS22025 () 168887..169723 - 837 WP_000480968.1 hypothetical protein ARG
CF168_RS22030 () 169723..170526 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
CF168_RS22035 () 170587..171402 - 816 WP_001043260.1 Dihydropteroate synthase ARG
CF168_RS22045 () 171709..172020 + 312 WP_000338945.1 hypothetical protein -
CF168_RS22050 () 172194..172979 + 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
CF168_RS22055 () 172983..174164 + 1182 WP_001207227.1 ParB/RepB/Spo0J family partition protein -
CF168_RS22060 () 174213..174485 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
CF168_RS22065 () 174538..175173 - 636 WP_000074431.1 N-6 DNA methylase -
CF168_RS22375 () 175265..175408 - 144 WP_000939033.1 hypothetical protein -
CF168_RS22075 () 175727..176104 + 378 WP_001125905.1 hypothetical protein -
CF168_RS22495 () 176097..176378 + 282 WP_000044824.1 hypothetical protein -
CF168_RS22085 () 176353..177027 + 675 WP_000344151.1 thymidylate kinase -
CF168_RS22090 () 177095..177526 + 432 WP_005507681.1 hypothetical protein -
CF168_RS22095 () 177532..177843 + 312 WP_002210541.1 hypothetical protein -
CF168_RS22100 () 177852..178352 + 501 WP_000647189.1 hypothetical protein -
CF168_RS22105 () 178356..179783 + 1428 WP_000936896.1 DNA cytosine methyltransferase -
CF168_RS22110 () 179783..180439 + 657 WP_000268551.1 hypothetical protein -
CF168_RS22120 () 180645..180863 + 219 WP_000362482.1 hypothetical protein -
CF168_RS22125 () 180957..181574 + 618 WP_000464631.1 hypothetical protein -
CF168_RS22135 () 181786..182085 + 300 WP_000542259.1 hypothetical protein -
CF168_RS22140 () 182177..182665 - 489 WP_000468105.1 hypothetical protein -
CF168_RS22145 () 182680..184872 - 2193 WP_000366822.1 DNA topoisomerase 3 -
CF168_RS22150 () 184872..185105 - 234 WP_001191892.1 hypothetical protein -
CF168_RS22155 () 185087..185704 - 618 WP_001249396.1 hypothetical protein -
CF168_RS22160 () 185872..188850 + 2979 WP_001337757.1 hypothetical protein Relaxase
CF168_RS22165 () 188847..190712 + 1866 WP_000178856.1 conjugative transfer system coupling protein TraD -
CF168_RS22170 () 190723..191307 + 585 WP_000332866.1 hypothetical protein -
CF168_RS22175 () 191264..191893 + 630 WP_000743450.1 DUF4400 domain-containing protein -
CF168_RS22180 () 191903..192349 + 447 WP_000122506.1 hypothetical protein -
CF168_RS22185 () 192359..192736 + 378 WP_000869261.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance