MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 106140 bp
Accession: NZ_CP022350 Location: 1..106140 Organism: Klebsiella michiganensis strain K516 Replicon: plasmid pK516_NDM1
Accession: NZ_CP022350 Location: 1..106140 Organism: Klebsiella michiganensis strain K516 Replicon: plasmid pK516_NDM1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CF000_RS32085 () | 505..753 | + | 249 | WP_016479982.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CF000_RS30865 () | 778..1296 | + | 519 | WP_089046467.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CF000_RS30870 () | 1289..1717 | + | 429 | WP_008324122.1 | hypothetical protein | - |
| CF000_RS30875 () | 1704..3073 | + | 1370 | Protein_4 | conjugal transfer protein TraH | - |
| CF000_RS30880 () | 3073..5894 | + | 2822 | Protein_5 | conjugal transfer mating pair stabilization protein TraG | - |
| CF000_RS30885 () | 5916..6347 | + | 432 | WP_008324118.1 | entry exclusion protein | - |
| CF000_RS30890 () | 6422..7097 | + | 676 | Protein_7 | Sel1-repeat-containing protein YbeT | VF |
| CF000_RS30895 () | 7231..9477 | + | 2247 | WP_016479979.1 | type IV conjugative transfer system coupling protein TraD | - |
| CF000_RS30900 () | 9477..14717 | + | 5241 | WP_016479978.1 | Multifunctional conjugation protein TraI | Relaxase |
| CF000_RS30905 () | 14719..15456 | + | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CF000_RS30910 () | 15523..16242 | + | 720 | WP_008324922.1 | fertility inhibition protein FinO | - |
| CF000_RS30915 () | 16235..17026 | + | 792 | WP_016479977.1 | DsbA family protein | - |
| CF000_RS30920 () | 17174..17719 | + | 546 | WP_008324931.1 | Phospholipase D | VF |
| CF000_RS30925 () | 17871..18149 | + | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| CF000_RS30935 () | 18368..18445 | + | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| CF000_RS30940 () | 18438..19301 | + | 864 | WP_016247520.1 | incFII family plasmid replication initiator RepA | - |
| CF000_RS32090 () | 20160..20306 | - | 147 | WP_032072915.1 | hypothetical protein | - |
| CF000_RS30965 () | 20445..21293 | + | 849 | WP_032072916.1 | hypothetical protein | - |
| CF000_RS30970 () | 21353..21637 | + | 285 | WP_032072917.1 | hypothetical protein | - |
| CF000_RS30975 () | 21726..22019 | + | 294 | WP_032072918.1 | hypothetical protein | - |
| CF000_RS30980 () | 22034..22624 | + | 591 | WP_064762226.1 | hypothetical protein | - |
| CF000_RS30985 () | 22651..23232 | + | 582 | WP_045265539.1 | DUF2913 family protein | - |
| CF000_RS30990 () | 23676..24233 | - | 558 | WP_042934582.1 | hypothetical protein | - |
| CF000_RS30995 () | 24361..24738 | - | 378 | Protein_24 | restriction endonuclease | - |
| CF000_RS31005 () | 24885..25865 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| CF000_RS31010 () | 25971..26804 | + | 834 | WP_198362312.1 | hypothetical protein | - |
| CF000_RS31015 () | 26873..27748 | + | 876 | Protein_27 | IS5 family transposase ISKpn26 | Transposase |
| CF000_RS31020 () | 27957..28616 | - | 660 | WP_032072920.1 | endonuclease III | - |
| CF000_RS31025 () | 28998..29549 | - | 552 | Protein_29 | DNA cytosine methyltransferase | - |
| CF000_RS31035 () | 30166..30465 | + | 300 | WP_001183923.1 | DUF2293 domain-containing protein | - |
| CF000_RS31040 () | 30549..30791 | - | 243 | WP_000376617.1 | hypothetical protein | - |
| CF000_RS31050 () | 30919..31758 | - | 840 | WP_032072921.1 | Dihydropteroate synthase | ARG |
| CF000_RS31055 () | 31752..31820 | - | 69 | Protein_33 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| CF000_RS31060 () | 32137..33102 | - | 966 | WP_015460530.1 | TniQ family protein | - |
| CF000_RS31065 () | 33104..34036 | - | 933 | WP_015460531.1 | TniB family NTP-binding protein | - |
| CF000_RS31070 () | 34033..34719 | - | 687 | WP_016479967.1 | Mu transposase C-terminal domain-containing protein | - |
| CF000_RS31075 () | 34753..35514 | - | 762 | WP_032072922.1 | DDE-type integrase/transposase/recombinase | - |
| CF000_RS31085 () | 36257..37786 | + | 1530 | WP_003149906.1 | IS91 family transposase ISVsa3 | Transposase |
| CF000_RS31095 () | 38083..38928 | + | 846 | WP_000855769.1 | RmtC family 16S rRNA (guanine(1405)-N(7))-methyltransferase | - |
| CF000_RS31100 () | 39486..40298 | + | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| CF000_RS31105 () | 40302..40667 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| CF000_RS31110 () | 40672..41310 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| CF000_RS31115 () | 41321..42352 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| CF000_RS31120 () | 42357..42686 | - | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| CF000_RS31125 () | 42880..43170 | + | 291 | WP_004201172.1 | co-chaperone GroES | - |
| CF000_RS31130 () | 43226..44866 | + | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| CF000_RS32095 () | 45055..45231 | + | 177 | Protein_47 | IS91 family transposase | - |
| CF000_RS32100 () | 45492..45611 | + | 120 | Protein_48 | IS30 family transposase | - |
| CF000_RS31135 () | 45621..46370 | + | 750 | Protein_49 | IS3 family transposase ISEhe3 | Transposase |
| CF000_RS31140 () | 46517..47533 | - | 1017 | WP_087728544.1 | IS5 family transposase IS5D | Transposase |
| CF000_RS31150 () | 47665..48195 | - | 531 | WP_016479963.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CF000_RS31155 () | 48199..48468 | - | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CF000_RS31160 () | 49324..50313 | + | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| CF000_RS31165 () | 50609..51348 | - | 740 | Protein_54 | site-specific integrase | - |
| CF000_RS32105 () | 51830..51982 | + | 153 | Protein_55 | IS5 family transposase IS5D | Transposase |
| CF000_RS31175 () | 52054..53174 | + | 1121 | WP_089046468.1 | IS3 family transposase ISSen4 | Transposase |
| CF000_RS31180 () | 53203..53949 | + | 747 | Protein_57 | IS5 family transposase IS5D | Transposase |
| CF000_RS31190 () | 54111..55433 | + | 1323 | WP_016479957.1 | GntP family transporter | - |
| CF000_RS31195 () | 55632..56423 | - | 792 | WP_008322208.1 | site-specific integrase | - |
| CF000_RS31200 () | 56413..56727 | - | 315 | WP_008322211.1 | hypothetical protein | - |
| CF000_RS31205 () | 56729..57034 | - | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CF000_RS31210 () | 57036..57254 | - | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CF000_RS31215 () | 58116..58813 | - | 698 | Protein_63 | IS1 family transposase | - |
| CF000_RS31225 () | 59026..61608 | + | 2583 | WP_016479955.1 | putative signaling protein | VF |
| CF000_RS31230 () | 61642..62346 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CF000_RS31245 () | 63154..63851 | + | 698 | Protein_66 | IS1 family transposase IS1R | Transposase |
| CF000_RS31250 () | 63867..64070 | + | 204 | Protein_67 | MerR family transcriptional regulator | - |
| CF000_RS31255 () | 64365..65609 | - | 1245 | WP_016479953.1 | hypothetical protein | VF |
| CF000_RS31260 () | 65699..67702 | - | 2004 | WP_016479952.1 | hypothetical protein | VF |
| CF000_RS31265 () | 67957..68654 | - | 698 | Protein_70 | IS1 family transposase IS1X2 | Transposase |
| CF000_RS31270 () | 68746..69714 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| CF000_RS31275 () | 69775..70407 | - | 633 | WP_016479950.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CF000_RS31280 () | 70770..71975 | + | 1206 | WP_015493083.1 | Plasmid partition protein A | VF |
| CF000_RS31285 () | 71972..72943 | + | 972 | WP_016479949.1 | ParB/RepB/Spo0J family partition protein | - |
| CF000_RS31295 () | 73079..74350 | - | 1272 | WP_015493081.1 | Y-family DNA polymerase | - |
| CF000_RS31300 () | 74350..74772 | - | 423 | WP_015493080.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CF000_RS31305 () | 74832..76052 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| CF000_RS31310 () | 76276..76947 | - | 672 | WP_015493079.1 | SOS response-associated peptidase family protein | - |
| CF000_RS31315 () | 77306..77983 | + | 678 | WP_002211749.1 | DNA methylase | - |
| CF000_RS31320 () | 77983..78204 | + | 222 | WP_015493077.1 | hypothetical protein | - |
| CF000_RS31325 () | 78215..78634 | + | 420 | WP_016479994.1 | DUF1380 domain-containing protein | - |
| CF000_RS31330 () | 78688..79467 | + | 780 | WP_015493075.1 | hypothetical protein | - |
| CF000_RS31335 () | 79872..80378 | + | 507 | WP_015493074.1 | antirestriction protein ArdA | - |
| CF000_RS31340 () | 80421..80612 | + | 192 | WP_015493073.1 | hypothetical protein | - |
| CF000_RS31345 () | 80805..81059 | + | 255 | WP_015493072.1 | DNA polymerase III subunit theta | - |
| CF000_RS31350 () | 81094..81411 | + | 318 | Protein_86 | hypothetical protein | - |
| CF000_RS31360 () | 82037..82267 | + | 231 | WP_015493071.1 | DUF905 domain-containing protein | - |
| CF000_RS31365 () | 82338..84347 | + | 2010 | WP_016479992.1 | ParB/RepB/Spo0J family partition protein | - |
| CF000_RS31370 () | 84390..84821 | + | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| CF000_RS31375 () | 84818..85546 | + | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| CF000_RS32265 () | 85543..85866 | + | 324 | WP_008324183.1 | hypothetical protein | - |
| CF000_RS31385 () | 85928..86287 | + | 360 | WP_015493069.1 | hypothetical protein | - |
| CF000_RS31390 () | 86914..87288 | + | 375 | WP_008324180.1 | hypothetical protein | - |
| CF000_RS31395 () | 87342..87629 | + | 288 | WP_008324178.1 | hypothetical protein | - |
| CF000_RS31400 () | 87676..88020 | + | 345 | WP_008324177.1 | hypothetical protein | - |
| CF000_RS31405 () | 88106..88369 | + | 264 | WP_008324174.1 | hypothetical protein | - |
| CF000_RS31410 () | 88412..89242 | + | 831 | WP_008324171.1 | type I restriction-modification system subunit M | - |
| CF000_RS31415 () | 89869..90399 | + | 531 | WP_008324170.1 | antirestriction protein | - |
| CF000_RS31420 () | 90446..90922 | - | 477 | WP_008324168.1 | hypothetical protein | VF |
| CF000_RS31425 () | 91354..91746 | + | 393 | WP_008324167.1 | relaxosome protein TraM | - |
| CF000_RS31430 () | 91935..92624 | + | 690 | WP_008324166.1 | hypothetical protein | - |
| CF000_RS31435 () | 92711..92935 | + | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| CF000_RS31440 () | 92993..93343 | + | 351 | WP_016247536.1 | type IV conjugative transfer system pilin TraA | - |
| CF000_RS31445 () | 93494..93799 | + | 306 | WP_016479987.1 | type IV conjugative transfer system protein TraL | - |
| CF000_RS31450 () | 93814..94380 | + | 567 | WP_016247535.1 | type IV conjugative transfer system protein TraE | - |
| CF000_RS31455 () | 94367..95110 | + | 744 | WP_008324157.1 | type-F conjugative transfer system secretin TraK | - |
| CF000_RS31460 () | 95097..96491 | + | 1395 | WP_016479986.1 | conjugal transfer protein TraB | - |
| CF000_RS31465 () | 96513..97052 | + | 540 | WP_016247533.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CF000_RS31470 () | 97172..97396 | + | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| CF000_RS31475 () | 97400..97585 | + | 186 | WP_008324139.1 | hypothetical protein | - |
| CF000_RS31480 () | 97569..97970 | + | 402 | WP_016479985.1 | hypothetical protein | - |
| CF000_RS31485 () | 97960..98526 | + | 567 | WP_008324135.1 | conjugal transfer protein TraP | - |
| CF000_RS31490 () | 98519..101149 | + | 2631 | WP_008324134.1 | type IV secretion system protein TraC | - |
| CF000_RS31495 () | 101146..101493 | + | 348 | WP_008324133.1 | type-F conjugative transfer system protein TrbI | - |
| CF000_RS31500 () | 101493..102140 | + | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| CF000_RS31505 () | 102143..103129 | + | 987 | WP_042934586.1 | conjugal transfer pilus assembly protein TraU | - |
| CF000_RS31510 () | 103146..103775 | + | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CF000_RS31515 () | 103772..105625 | + | 1854 | WP_016479983.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CF000_RS31520 () | 105657..105845 | + | 189 | WP_008324128.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|