MGE detailed information
MGE type: Conjugative plasmid MGE length: 150853 bp
Accession: NZ_CP022227 Location: 1..150853 Organism: Escherichia coli strain WCHEC96200 Replicon: plasmid pCTXM15_000200
Accession: NZ_CP022227 Location: 1..150853 Organism: Escherichia coli strain WCHEC96200 Replicon: plasmid pCTXM15_000200
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
DBR04_RS00265 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
DBR04_RS00270 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
DBR04_RS00275 () | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
DBR04_RS00280 () | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
DBR04_RS00285 () | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
DBR04_RS00290 () | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
DBR04_RS00295 () | 5492..5928 | - | 437 | Protein_6 | IS3 family transposase IS2 | Transposase |
DBR04_RS00300 () | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
DBR04_RS00305 () | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
DBR04_RS00310 () | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
DBR04_RS00315 () | 9717..10496 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
DBR04_RS00320 () | 10496..11518 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
DBR04_RS00325 () | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
DBR04_RS00330 () | 12598..12972 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
DBR04_RS00335 () | 12997..13701 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
DBR04_RS00345 () | 13754..14143 | + | 390 | Protein_15 | Tn3 family transposase TnpR_ISSba14 | Transposase |
DBR04_RS00350 () | 14328..14885 | + | 558 | WP_000108589.1 | OsmC family protein | - |
DBR04_RS00355 () | 15027..15608 | + | 582 | WP_000210409.1 | HTH-type transcriptional repressor NemR | VF |
DBR04_RS00360 () | 15613..15951 | + | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
DBR04_RS00365 () | 15981..16310 | - | 330 | WP_002431133.1 | thioredoxin family protein | - |
DBR04_RS00370 () | 16524..17630 | + | 1107 | WP_000039982.1 | alkene reductase | - |
DBR04_RS00375 () | 17696..17959 | + | 264 | Protein_21 | DsbA family protein | - |
DBR04_RS00380 () | 18010..18714 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
DBR04_RS00385 () | 18903..19600 | + | 698 | Protein_23 | IS1 family transposase IS1R | Transposase |
DBR04_RS00390 () | 19597..19860 | + | 264 | WP_049802299.1 | antibiotic biosynthesis monooxygenase | - |
DBR04_RS00395 () | 19853..20239 | + | 387 | WP_000460651.1 | hypothetical protein | - |
DBR04_RS00400 () | 20247..20933 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
DBR04_RS00405 () | 20911..21534 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
DBR04_RS00410 () | 21616..22821 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
DBR04_RS00415 () | 22856..23553 | - | 698 | Protein_29 | IS1 family transposase IS1X2 | Transposase |
DBR04_RS00430 () | 24016..24174 | + | 159 | WP_000449408.1 | DsbA family protein | - |
DBR04_RS00435 () | 24164..24670 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
DBR04_RS00440 () | 24853..25668 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
DBR04_RS00450 () | 26015..27901 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
DBR04_RS00455 () | 27942..28469 | + | 528 | WP_000178050.1 | iron transporter | - |
DBR04_RS00460 () | 28573..29952 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
DBR04_RS00465 () | 29955..31238 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
DBR04_RS00470 () | 31228..32358 | + | 1131 | WP_000729219.1 | ABC transporter permease | - |
DBR04_RS00475 () | 32363..33058 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
DBR04_RS00480 () | 33045..33530 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
DBR04_RS00485 () | 33555..34040 | + | 486 | WP_000874189.1 | hypothetical protein | - |
DBR04_RS00490 () | 34162..34794 | + | 633 | Protein_41 | histidine-type phosphatase | - |
DBR04_RS00495 () | 34944..35048 | - | 105 | Protein_42 | IS5/IS1182 family transposase | - |
DBR04_RS00500 () | 35326..36330 | - | 1005 | WP_021546935.1 | IS110 family transposase IS4321R | Transposase |
DBR04_RS00505 () | 36430..36743 | - | 314 | Protein_44 | Tn3 family transposase | - |
DBR04_RS00510 () | 36770..37522 | - | 753 | WP_000734115.1 | alpha/beta hydrolase | - |
DBR04_RS00515 () | 37764..38636 | + | 873 | WP_000090196.1 | DMT family transporter | - |
DBR04_RS00520 () | 38767..39990 | + | 1224 | WP_000872613.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
DBR04_RS00525 () | 40176..40949 | - | 774 | WP_032152933.1 | SDR family oxidoreductase | - |
DBR04_RS00530 () | 41015..41461 | - | 447 | Protein_49 | DsbA family protein | - |
DBR04_RS00535 () | 41526..42230 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
DBR04_RS00545 () | 42282..42518 | + | 237 | Protein_51 | IS6 family transposase | - |
DBR04_RS00560 () | 43011..43595 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
DBR04_RS00565 () | 43595..44833 | - | 1239 | WP_000004159.1 | MFS transporter | - |
DBR04_RS00570 () | 44830..45735 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
DBR04_RS00580 () | 45857..46561 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
DBR04_RS00590 () | 46902..47105 | - | 204 | WP_064765192.1 | hypothetical protein | - |
DBR04_RS00600 () | 47302..48141 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
DBR04_RS00605 () | 48135..48482 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
DBR04_RS00610 () | 48688..49476 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
DBR04_RS00615 () | 49607..50080 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
DBR04_RS00620 () | 50238..51251 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
DBR04_RS26710 () | 51454..51744 | + | 291 | WP_032152941.1 | DUF3330 domain-containing protein | - |
DBR04_RS00630 () | 51781..52485 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
DBR04_RS00635 () | 52539..53507 | + | 969 | Protein_64 | IS1380 family transposase ISEcp1 | Transposase |
DBR04_RS00640 () | 53763..54638 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
DBR04_RS00645 () | 54685..55017 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
DBR04_RS00650 () | 55031..57274 | + | 2244 | Protein_67 | Tn3 family transposase TnpA_Tn3 | Transposase |
DBR04_RS00655 () | 57339..58043 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
DBR04_RS00660 () | 58097..59145 | - | 1049 | Protein_69 | IS3 family transposase ISKpn11 | Transposase |
DBR04_RS00665 () | 59237..59779 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
DBR04_RS00670 () | 59792..60652 | - | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
DBR04_RS00675 () | 60759..61463 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
DBR04_RS00680 () | 61517..61957 | - | 441 | Protein_73 | CatB-related O-acetyltransferase | - |
DBR04_RS00685 () | 62095..62925 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
DBR04_RS00690 () | 63056..63610 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
DBR04_RS00695 () | 63754..64458 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
DBR04_RS00700 () | 64524..65036 | + | 513 | Protein_77 | Tn3 family transposase TnpA_TnAs1 | Transposase |
DBR04_RS00705 () | 65060..65665 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
DBR04_RS00710 () | 65760..68657 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
DBR04_RS00715 () | 68794..69195 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
DBR04_RS00720 () | 69128..69385 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
DBR04_RS00725 () | 69478..70131 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
DBR04_RS26715 () | 70229..70369 | - | 141 | WP_001333237.1 | hypothetical protein | - |
DBR04_RS00735 () | 71070..71927 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
DBR04_RS00740 () | 71920..71994 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
DBR04_RS00750 () | 72229..72486 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
DBR04_RS00760 () | 72891..73913 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
DBR04_RS00765 () | 74385..74738 | + | 354 | WP_000005489.1 | hypothetical protein | - |
DBR04_RS00770 () | 75151..75729 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
DBR04_RS00775 () | 75762..76459 | + | 698 | Protein_90 | IS1 family transposase IS1A | Transposase |
DBR04_RS00780 () | 76568..76930 | + | 363 | WP_059330006.1 | IS66 family transposase ISEc23 | Transposase |
DBR04_RS00785 () | 76927..77277 | + | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
DBR04_RS00790 () | 77308..77529 | + | 222 | WP_000080227.1 | hypothetical protein | - |
DBR04_RS00795 () | 77481..77822 | + | 342 | Protein_94 | transposase | - |
DBR04_RS00800 () | 77886..78365 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
DBR04_RS00805 () | 78446..79849 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
DBR04_RS00810 () | 79897..80901 | - | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
DBR04_RS00815 () | 80986..81897 | - | 912 | WP_000440183.1 | carbamate kinase | - |
DBR04_RS00820 () | 81908..83128 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
DBR04_RS00825 () | 84021..84503 | + | 483 | Protein_100 | VENN motif pre-toxin domain-containing protein | - |
DBR04_RS00830 () | 84449..84895 | - | 447 | Protein_101 | incFII family plasmid replication initiator RepA | - |
DBR04_RS00835 () | 84888..84962 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
DBR04_RS00845 () | 85198..85455 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
DBR04_RS00850 () | 85739..85945 | - | 207 | WP_015387399.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
- () | 85932..85993 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
- () | 85932..85993 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
- () | 85932..85993 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
- () | 85932..85993 | + | 62 | NuclAT_2 | - | Antitoxin Detail |
DBR04_RS00860 () | 86132..86314 | - | 183 | WP_000968309.1 | hypothetical protein | - |
DBR04_RS00865 () | 86415..87031 | + | 617 | Protein_106 | IS1 family transposase | - |
DBR04_RS00870 () | 87069..88640 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
DBR04_RS00875 () | 88660..89007 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
DBR04_RS00880 () | 89007..89684 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
DBR04_RS26720 () | 89739..89828 | + | 90 | Protein_110 | IS1 family transposase | - |
DBR04_RS00895 () | 90129..90341 | - | 213 | WP_005012601.1 | hypothetical protein | - |
DBR04_RS00900 () | 90475..91035 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
DBR04_RS00905 () | 91090..91836 | - | 747 | WP_023149624.1 | conjugal transfer pilus acetylase TraX | - |
DBR04_RS00910 () | 91856..96976 | - | 5121 | WP_013362805.1 | Multifunctional conjugation protein TraI | Relaxase |
DBR04_RS00915 () | 96976..99174 | - | 2199 | WP_046464200.1 | type IV conjugative transfer system coupling protein TraD | - |
DBR04_RS00925 () | 99426..100157 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
DBR04_RS00930 () | 100171..100680 | - | 510 | WP_000628100.1 | conjugal transfer entry exclusion protein TraS | - |
DBR04_RS00935 () | 100677..103502 | - | 2826 | WP_087503535.1 | conjugal transfer mating pair stabilization protein TraG | - |
DBR04_RS00940 () | 103499..104872 | - | 1374 | WP_021518370.1 | conjugal transfer protein TraH | - |
DBR04_RS00945 () | 104859..105251 | - | 393 | WP_000164675.1 | F-type conjugal transfer protein TrbF | - |
DBR04_RS00950 () | 105205..105579 | - | 375 | WP_071788165.1 | P-type conjugative transfer protein TrbJ | - |
DBR04_RS00955 () | 105509..106063 | - | 555 | WP_001553830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
DBR04_RS00960 () | 106050..106334 | - | 285 | WP_000624105.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
DBR04_RS00965 () | 106415..106750 | + | 336 | WP_000415571.1 | hypothetical protein | - |
DBR04_RS00970 () | 106731..107072 | - | 342 | WP_000556794.1 | conjugal transfer protein TrbA | - |
DBR04_RS00975 () | 107086..107829 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
DBR04_RS00980 () | 107822..108079 | - | 258 | WP_000864312.1 | conjugal transfer protein TrbE | - |
DBR04_RS00985 () | 108106..109914 | - | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
DBR04_RS00990 () | 109911..110549 | - | 639 | WP_021518374.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
DBR04_RS00995 () | 110558..111550 | - | 993 | WP_000830180.1 | conjugal transfer pilus assembly protein TraU | - |
DBR04_RS01000 () | 111547..112179 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
DBR04_RS01005 () | 112176..112562 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
DBR04_RS01010 () | 112559..115186 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
DBR04_RS01015 () | 115346..115567 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
DBR04_RS01020 () | 115702..116217 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
DBR04_RS01025 () | 116214..116465 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
DBR04_RS01030 () | 116477..116707 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
DBR04_RS01035 () | 116661..117251 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
DBR04_RS01040 () | 117241..118668 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
DBR04_RS01045 () | 118668..119372 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
DBR04_RS01050 () | 119383..119949 | - | 567 | WP_021514868.1 | type IV conjugative transfer system protein TraE | - |
DBR04_RS01055 () | 119971..120282 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
DBR04_RS01060 () | 120297..120662 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
DBR04_RS01065 () | 120695..121090 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
DBR04_RS01070 () | 121189..121878 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
DBR04_RS01075 () | 122065..122448 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
DBR04_RS01080 () | 122769..123371 | + | 603 | WP_013362798.1 | hypothetical protein | VF |
DBR04_RS01085 () | 123668..124489 | - | 822 | WP_001234426.1 | DUF945 domain-containing protein | - |
DBR04_RS01090 () | 124607..124894 | - | 288 | WP_000107535.1 | hypothetical protein | - |
DBR04_RS01100 () | 126096..127763 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
DBR04_RS01105 () | 128158..128316 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
- () | 128360..128391 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
- () | 128360..128391 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
- () | 128360..128391 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
- () | 128360..128391 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
- () | 129833..130030 | - | 198 | NuclAT_0 | - | - |
- () | 129833..130030 | - | 198 | NuclAT_0 | - | - |
- () | 129833..130030 | - | 198 | NuclAT_0 | - | - |
- () | 129833..130030 | - | 198 | NuclAT_0 | - | - |
DBR04_RS26725 () | 129842..130030 | + | 189 | WP_001299721.1 | hypothetical protein | - |
DBR04_RS01115 () | 130042..130761 | - | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
DBR04_RS01120 () | 130758..131192 | - | 435 | WP_000845937.1 | conjugation system SOS inhibitor PsiB | - |
DBR04_RS01125 () | 131247..131444 | - | 198 | Protein_156 | hypothetical protein | - |
DBR04_RS01130 () | 131472..131705 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
DBR04_RS01135 () | 131773..132312 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
DBR04_RS01145 () | 133515..135182 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
DBR04_RS01155 () | 135495..135686 | - | 192 | WP_001027495.1 | hypothetical protein | - |
DBR04_RS01160 () | 135683..136105 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
DBR04_RS01165 () | 136152..136454 | - | 303 | WP_001666994.1 | antirestriction protein | - |
DBR04_RS01175 () | 136991..137761 | - | 771 | WP_001006251.1 | hypothetical protein | - |
DBR04_RS01180 () | 137806..138240 | - | 435 | WP_001546462.1 | DUF1380 family protein | - |
DBR04_RS01185 () | 138254..138475 | - | 222 | WP_001104873.1 | hypothetical protein | - |
DBR04_RS01190 () | 138476..139159 | - | 684 | WP_032181561.1 | DNA methylase | - |
DBR04_RS01195 () | 139236..139540 | - | 305 | Protein_167 | hypothetical protein | - |
DBR04_RS01200 () | 139544..140446 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
DBR04_RS01210 () | 141184..142155 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
DBR04_RS01215 () | 142155..143321 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
DBR04_RS01220 () | 143909..144664 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
DBR04_RS01225 () | 145386..146192 | - | 807 | WP_000016970.1 | site-specific integrase | - |
DBR04_RS01230 () | 146193..146498 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | - |
DBR04_RS01235 () | 146500..146718 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | - |
DBR04_RS01250 () | 149038..149679 | + | 642 | WP_000990667.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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