MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 109681 bp
Accession: NZ_CP022140 Location: 1..109681 Organism: Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K Replicon: plasmid unnamed1
Accession: NZ_CP022140 Location: 1..109681 Organism: Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFZ47_RS25525 () | 788..880 | + | 93 | Protein_1 | transposase | - |
| LFZ47_RS24270 () | 1129..2135 | - | 1007 | Protein_2 | IS110 family transposase | - |
| LFZ47_RS25530 () | 2268..2525 | + | 258 | WP_141030807.1 | hypothetical protein | - |
| LFZ47_RS24275 () | 2748..2948 | + | 201 | Protein_4 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| LFZ47_RS24280 () | 3093..3432 | - | 340 | Protein_5 | transposase | - |
| LFZ47_RS25535 () | 3435..3518 | - | 84 | WP_115276821.1 | hypothetical protein | - |
| LFZ47_RS24285 () | 3825..4142 | - | 318 | WP_080226142.1 | helix-turn-helix transcriptional regulator | - |
| LFZ47_RS24290 () | 4287..4817 | - | 531 | WP_080226141.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| LFZ47_RS24295 () | 4959..5870 | - | 912 | WP_080226140.1 | VirK/YbjX family protein | - |
| LFZ47_RS24300 () | 5941..7038 | - | 1098 | WP_080226139.1 | glycosyltransferase family 4 protein | - |
| LFZ47_RS24305 () | 7051..7872 | - | 822 | WP_080226138.1 | polysaccharide deacetylase family protein | - |
| LFZ47_RS24315 () | 8379..9143 | - | 765 | WP_080226137.1 | fimbrial protein | - |
| LFZ47_RS24320 () | 9170..9967 | - | 798 | WP_080226136.1 | F4 (K88) fimbria minor subunit FaeH | - |
| LFZ47_RS24325 () | 10199..11014 | - | 816 | WP_080226135.1 | fimbrial protein | - |
| LFZ47_RS24330 () | 11233..11724 | - | 492 | WP_080226134.1 | DUF5462 family protein | - |
| LFZ47_RS24335 () | 11760..12545 | - | 786 | WP_080226159.1 | fimbria/pilus periplasmic chaperone | - |
| LFZ47_RS24340 () | 12568..15006 | - | 2439 | WP_080226133.1 | F4 (K88) fimbrial usher FaeD | - |
| LFZ47_RS24345 () | 15016..15555 | - | 540 | WP_088744857.1 | type 1 fimbrial protein | - |
| LFZ47_RS24350 () | 15592..15912 | - | 321 | WP_088744859.1 | adhesin biosynthesis transcription regulatory family protein | - |
| LFZ47_RS24355 () | 16446..16634 | + | 189 | WP_080226161.1 | hypothetical protein | - |
| LFZ47_RS24360 () | 17434..17580 | - | 147 | WP_080226158.1 | colicin release lysis protein | - |
| LFZ47_RS24365 () | 17667..17927 | - | 261 | WP_080226157.1 | bacteriocin immunity protein | - |
| LFZ47_RS24370 () | 17930..19678 | - | 1749 | WP_080226156.1 | colicin | - |
| LFZ47_RS24375 () | 20062..20544 | - | 483 | WP_080226155.1 | hypothetical protein | - |
| LFZ47_RS24380 () | 20780..21106 | - | 327 | Protein_25 | hypothetical protein | - |
| LFZ47_RS24385 () | 22276..22788 | - | 513 | Protein_26 | replication initiator protein RepA | - |
| LFZ47_RS24390 () | 22821..23426 | - | 606 | WP_088744861.1 | recombinase family protein | - |
| LFZ47_RS24395 () | 23521..26418 | + | 2898 | WP_088744863.1 | Tn3 family transposase | - |
| LFZ47_RS24400 () | 26480..27291 | + | 812 | Protein_29 | IS3 family transposase | - |
| LFZ47_RS24405 () | 27741..28586 | - | 846 | WP_080227279.1 | AraC family transcriptional regulator | - |
| LFZ47_RS24410 () | 29114..29971 | + | 858 | Protein_31 | IS4 family transposase | - |
| LFZ47_RS24415 () | 30271..30486 | - | 216 | WP_080227289.1 | hypothetical protein | - |
| LFZ47_RS24420 () | 30778..31605 | - | 828 | WP_080227280.1 | outer membrane protein assembly factor BamE | - |
| LFZ47_RS24425 () | 31669..35259 | - | 3591 | WP_080227281.1 | YadA-like family protein | - |
| LFZ47_RS24435 () | 35994..36284 | - | 291 | Protein_35 | IS630 family transposase | - |
| LFZ47_RS24440 () | 36507..36704 | - | 198 | WP_080227283.1 | PerC family transcriptional regulator | - |
| LFZ47_RS24445 () | 37139..37324 | + | 186 | WP_080227284.1 | hypothetical protein | - |
| LFZ47_RS24450 () | 37528..38736 | + | 1209 | WP_088744865.1 | IS256 family transposase | - |
| LFZ47_RS24455 () | 39697..39966 | + | 270 | WP_080227287.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LFZ47_RS24460 () | 39970..40500 | + | 531 | WP_080227286.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LFZ47_RS24465 () | 40599..41807 | - | 1209 | WP_088744867.1 | IS256 family transposase | - |
| LFZ47_RS24475 () | 43343..44598 | + | 1256 | WP_088744871.1 | IS3 family transposase | - |
| LFZ47_RS24480 () | 44940..45950 | - | 1011 | WP_080227760.1 | replication initiation protein | - |
| LFZ47_RS24485 () | 46696..47862 | + | 1167 | WP_023994210.1 | plasmid-partitioning protein SopA | - |
| LFZ47_RS24490 () | 47862..48821 | + | 960 | WP_080227759.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LFZ47_RS24495 () | 48878..49306 | - | 429 | Protein_47 | transposase | - |
| LFZ47_RS24500 () | 49622..50104 | - | 483 | WP_023994162.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LFZ47_RS24505 () | 50095..50379 | - | 285 | WP_001195098.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LFZ47_RS24510 () | 50500..50754 | + | 255 | WP_080227067.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LFZ47_RS24520 () | 51014..51884 | - | 871 | Protein_51 | transposase | - |
| LFZ47_RS24525 () | 51980..53559 | + | 1580 | Protein_52 | ISL3 family transposase | - |
| LFZ47_RS25720 () | 53548..54331 | + | 784 | Protein_53 | IS3 family transposase | - |
| LFZ47_RS24535 () | 55882..56157 | + | 276 | Protein_54 | transposase | - |
| LFZ47_RS24540 () | 56349..56459 | + | 111 | WP_080227076.1 | transposase | - |
| LFZ47_RS24545 () | 57675..58877 | + | 1203 | WP_080227069.1 | IS256 family transposase | - |
| LFZ47_RS24550 () | 58936..60128 | + | 1193 | Protein_57 | IS4 family transposase | - |
| LFZ47_RS24555 () | 60181..60384 | + | 204 | WP_080227070.1 | hypothetical protein | - |
| LFZ47_RS24560 () | 60426..60677 | - | 252 | WP_080227071.1 | helix-turn-helix domain-containing protein | - |
| LFZ47_RS25550 () | 61289..62110 | + | 822 | Protein_60 | DUF4942 domain-containing protein | - |
| LFZ47_RS24570 () | 62330..62662 | + | 333 | WP_080227072.1 | nikA protein | - |
| LFZ47_RS24575 () | 62672..65371 | + | 2700 | WP_080227073.1 | IncI1-type relaxase NikB | - |
| LFZ47_RS24580 () | 65588..65800 | - | 213 | WP_179131750.1 | hypothetical protein | - |
| LFZ47_RS24585 () | 66352..66639 | + | 288 | WP_088744873.1 | adhesin biosynthesis transcription regulatory family protein | - |
| LFZ47_RS24590 () | 66676..67017 | + | 342 | Protein_65 | fimbrial protein | - |
| LFZ47_RS24595 () | 66912..67280 | - | 369 | WP_080227077.1 | transposase | - |
| LFZ47_RS24600 () | 67363..68736 | + | 1374 | Protein_67 | ISL3 family transposase | - |
| LFZ47_RS24605 () | 69198..69404 | + | 207 | WP_080227892.1 | hypothetical protein | - |
| LFZ47_RS25555 () | 69442..69645 | + | 204 | WP_141030882.1 | hypothetical protein | - |
| LFZ47_RS24610 () | 70021..70425 | + | 405 | WP_080227891.1 | PPC domain-containing protein | - |
| LFZ47_RS25560 () | 70704..70826 | + | 123 | Protein_71 | helix-turn-helix domain-containing protein | - |
| LFZ47_RS24615 () | 70914..71747 | - | 834 | Protein_72 | IS3 family transposase | - |
| LFZ47_RS24620 () | 71843..71959 | + | 117 | Protein_73 | transposase | - |
| LFZ47_RS24625 () | 72185..73202 | - | 1018 | Protein_74 | IS110 family transposase | - |
| LFZ47_RS24630 () | 73269..74239 | + | 971 | Protein_75 | IS3 family transposase | - |
| LFZ47_RS25565 () | 74598..74945 | + | 348 | WP_115276819.1 | hypothetical protein | - |
| LFZ47_RS24640 () | 75320..75553 | + | 234 | WP_088744876.1 | hypothetical protein | - |
| LFZ47_RS24645 () | 76233..76631 | + | 399 | WP_080227016.1 | hypothetical protein | - |
| LFZ47_RS25570 () | 76726..76794 | + | 69 | Protein_79 | hypothetical protein | - |
| LFZ47_RS25725 () | 76778..77101 | - | 324 | WP_179131747.1 | hypothetical protein | - |
| LFZ47_RS24655 () | 78175..78996 | + | 822 | WP_080227018.1 | polysaccharide deacetylase family protein | - |
| LFZ47_RS24660 () | 79006..80094 | + | 1089 | WP_080227025.1 | glycosyltransferase family 4 protein | - |
| LFZ47_RS24665 () | 80146..81105 | + | 960 | WP_080227019.1 | VirK/YbjX family protein | - |
| LFZ47_RS24670 () | 81185..82150 | + | 966 | WP_080227020.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| LFZ47_RS24680 () | 84008..84262 | - | 255 | WP_080227021.1 | hypothetical protein | - |
| LFZ47_RS24685 () | 84406..84654 | + | 249 | Protein_87 | transposase | - |
| LFZ47_RS24690 () | 84874..85718 | + | 845 | Protein_88 | transposase | - |
| LFZ47_RS25575 () | 86411..86677 | + | 267 | WP_115276817.1 | bacteriocin | - |
| LFZ47_RS24695 () | 87031..88113 | + | 1083 | Protein_90 | IS3 family transposase | - |
| LFZ47_RS24700 () | 88932..90206 | + | 1275 | WP_080227022.1 | HlyD family secretion protein | - |
| LFZ47_RS24705 () | 90199..92298 | + | 2100 | WP_080227023.1 | peptidase domain-containing ABC transporter | - |
| LFZ47_RS24710 () | 92696..93904 | - | 1209 | WP_088744878.1 | IS256 family transposase | - |
| LFZ47_RS24715 () | 93964..94641 | + | 678 | Protein_94 | RepB family plasmid replication initiator protein | - |
| LFZ47_RS24720 () | 94674..95207 | - | 534 | WP_080226154.1 | recombinase family protein | - |
| LFZ47_RS24725 () | 95382..96927 | - | 1546 | Protein_96 | hypothetical protein | - |
| LFZ47_RS25730 () | 97560..97724 | - | 165 | WP_179131721.1 | hypothetical protein | - |
| LFZ47_RS25585 () | 97765..97899 | + | 135 | Protein_98 | helix-turn-helix domain-containing protein | - |
| LFZ47_RS24735 () | 97886..98134 | + | 249 | Protein_99 | ATP-binding protein | - |
| LFZ47_RS24740 () | 98189..99736 | + | 1548 | Protein_100 | Tn3 family transposase | - |
| LFZ47_RS24745 () | 100004..100540 | + | 537 | Protein_101 | ATP-binding cassette domain-containing protein | - |
| LFZ47_RS24750 () | 101072..101341 | + | 270 | WP_080226152.1 | hypothetical protein | - |
| LFZ47_RS24755 () | 101544..102236 | - | 693 | WP_080226151.1 | CPBP family intramembrane metalloprotease | - |
| LFZ47_RS24760 () | 102607..102954 | - | 348 | Protein_104 | Tn3 family transposase | - |
| LFZ47_RS24765 () | 102946..103209 | + | 264 | Protein_105 | protein RepA | - |
| LFZ47_RS24770 () | 103493..104233 | - | 741 | WP_080226150.1 | site-specific integrase | - |
| LFZ47_RS24780 () | 104879..105145 | - | 267 | WP_080226148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LFZ47_RS24785 () | 105340..105741 | - | 402 | WP_080226147.1 | hypothetical protein | - |
| LFZ47_RS24790 () | 105786..106154 | - | 369 | WP_080226146.1 | helix-turn-helix transcriptional regulator | - |
| LFZ47_RS24795 () | 106374..106901 | - | 528 | WP_080226145.1 | helix-turn-helix domain-containing protein | - |
| LFZ47_RS24800 () | 106958..107197 | - | 240 | WP_080226144.1 | hypothetical protein | - |
| LFZ47_RS24805 () | 107496..108365 | - | 870 | WP_080226143.1 | hypothetical protein | - |
| LFZ47_RS25590 () | 108608..108762 | - | 155 | Protein_113 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|