Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) kacAT/ElaA-DUF1778
Location 39697..40500 Replicon plasmid unnamed1
Accession NZ_CP022140
Organism Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K

Toxin (Protein)


Gene name KacT Uniprot ID -
Locus tag LFZ47_RS24460 Protein ID WP_080227286.1
Coordinates 39970..40500 (+) Length 177 a.a.

Antitoxin (Protein)


Gene name KacA Uniprot ID -
Locus tag LFZ47_RS24455 Protein ID WP_080227287.1
Coordinates 39697..39966 (+) Length 90 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LFZ47_RS24435 35994..36284 - 291 Protein_35 IS630 family transposase -
LFZ47_RS24440 36507..36704 - 198 WP_080227283.1 PerC family transcriptional regulator -
LFZ47_RS24445 37139..37324 + 186 WP_080227284.1 hypothetical protein -
LFZ47_RS24450 37528..38736 + 1209 WP_088744865.1 IS256 family transposase -
LFZ47_RS24455 39697..39966 + 270 WP_080227287.1 DUF1778 domain-containing protein Antitoxin
LFZ47_RS24460 39970..40500 + 531 WP_080227286.1 GNAT family N-acetyltransferase Toxin
LFZ47_RS24465 40599..41807 - 1209 WP_088744867.1 IS256 family transposase -
LFZ47_RS24475 43343..44598 + 1256 WP_088744871.1 IS3 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..109681 109681


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

PIN domain

(9-125)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-57)


Sequences

Toxin        


Download         Length: 177 a.a.        Molecular weight: 22704.83 Da        Isoelectric Point: 13.0455

>T78541 WP_080227286.1 NZ_CP022140:39970-40500 [Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKKKKKKKKKKKKK

Download         Length: 531 bp

>T78541 NZ_CP022140:39970-40500 [Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Antitoxin


Download         Length: 90 a.a.        Molecular weight: 11553.68 Da        Isoelectric Point: 12.7493

>AT78541 WP_080227287.1 NZ_CP022140:39697-39966 [Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKKKKKK

Download         Length: 270 bp

>AT78541 NZ_CP022140:39697-39966 [Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References