MGE detailed information
MGE type: Conjugative plasmid MGE length: 89382 bp
Accession: NZ_CP021959 Location: 1..89382 Organism: Klebsiella pneumoniae strain AR_0139 Replicon: plasmid tig00000003
Accession: NZ_CP021959 Location: 1..89382 Organism: Klebsiella pneumoniae strain AR_0139 Replicon: plasmid tig00000003
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM386_RS00705 () | 290..1561 | - | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| AM386_RS00710 () | 1561..1992 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM386_RS00715 () | 2226..3197 | + | 972 | WP_004152353.1 | mediator of plasmid stability | - |
| AM386_RS00720 () | 3200..3871 | + | 672 | WP_032435767.1 | plasmid partitioning/stability family protein | - |
| AM386_RS00725 () | 3935..4165 | + | 231 | WP_009309993.1 | hypothetical protein | - |
| AM386_RS00735 () | 4602..5303 | + | 702 | WP_001568041.1 | DNA methylase | - |
| AM386_RS00740 () | 5303..5524 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| AM386_RS00745 () | 5534..5953 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| AM386_RS00750 () | 6007..6774 | + | 768 | WP_001568044.1 | hypothetical protein | - |
| AM386_RS32095 () | 7455..7883 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| AM386_RS00760 () | 7926..8432 | + | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| AM386_RS00765 () | 8475..8666 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| AM386_RS00770 () | 8854..9108 | + | 255 | WP_024191981.1 | DNA polymerase III subunit theta | - |
| AM386_RS00775 () | 9143..9463 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| AM386_RS00790 () | 10143..10370 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| AM386_RS00795 () | 10462..10692 | + | 231 | WP_009310031.1 | hypothetical protein | - |
| AM386_RS00800 () | 10744..12099 | + | 1356 | WP_048284363.1 | DUF3560 domain-containing protein | - |
| AM386_RS00805 () | 12147..12710 | + | 564 | WP_004152756.1 | methyltransferase | - |
| AM386_RS00825 () | 13540..14082 | + | 543 | WP_032736793.1 | single-stranded DNA-binding protein | - |
| AM386_RS00830 () | 14131..14379 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| AM386_RS00835 () | 14449..16506 | + | 2058 | WP_071571081.1 | ParB/RepB/Spo0J family partition protein | - |
| AM386_RS00840 () | 16551..16982 | + | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| AM386_RS00845 () | 16979..17707 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| AM386_RS00850 () | 17704..18030 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| AM386_RS00855 () | 18086..18460 | + | 375 | WP_023280872.1 | hypothetical protein | - |
| AM386_RS00865 () | 18661..19170 | + | 510 | WP_009310022.1 | IS3 family transposase ISKpn8 | Transposase |
| AM386_RS00875 () | 19413..20393 | - | 981 | WP_071571082.1 | IS5 family transposase ISKpn26 | Transposase |
| AM386_RS00880 () | 20486..20698 | + | 213 | WP_019706020.1 | hypothetical protein | - |
| AM386_RS00885 () | 20709..20933 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| AM386_RS00890 () | 21014..21334 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AM386_RS00895 () | 21324..21602 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| AM386_RS00900 () | 21603..22016 | + | 414 | WP_023287139.1 | helix-turn-helix domain-containing protein | - |
| AM386_RS00925 () | 22846..23667 | + | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| AM386_RS00930 () | 23700..24029 | + | 330 | WP_047066474.1 | hypothetical protein | - |
| AM386_RS00935 () | 24062..24547 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| AM386_RS00940 () | 24938..25354 | + | 417 | WP_072145360.1 | relaxosome protein TraM | - |
| AM386_RS00945 () | 25554..26273 | + | 720 | WP_015065526.1 | hypothetical protein | - |
| AM386_RS00950 () | 26406..26612 | + | 207 | WP_171773970.1 | TraY domain-containing protein | - |
| AM386_RS00955 () | 26674..27042 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| AM386_RS00960 () | 27056..27361 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| AM386_RS00965 () | 27381..27947 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| AM386_RS00970 () | 27934..28674 | + | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| AM386_RS00975 () | 28674..30098 | + | 1425 | WP_015065626.1 | conjugal transfer protein TraB | - |
| AM386_RS00980 () | 30170..30754 | + | 585 | WP_014343493.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM386_RS00985 () | 31128..31307 | + | 180 | WP_020805158.1 | hypothetical protein | - |
| AM386_RS00995 () | 31650..31868 | + | 219 | WP_004195468.1 | hypothetical protein | - |
| AM386_RS01000 () | 31869..32180 | + | 312 | WP_047066479.1 | hypothetical protein | - |
| AM386_RS01005 () | 32247..32651 | + | 405 | WP_004197817.1 | hypothetical protein | - |
| AM386_RS01020 () | 33027..33425 | + | 399 | WP_023179972.1 | hypothetical protein | - |
| AM386_RS01025 () | 33497..36136 | + | 2640 | WP_032431388.1 | type IV secretion system protein TraC | - |
| AM386_RS01030 () | 36136..36525 | + | 390 | WP_032736784.1 | type-F conjugative transfer system protein TrbI | - |
| AM386_RS01035 () | 36525..37151 | + | 627 | WP_020277949.1 | type-F conjugative transfer system protein TraW | - |
| AM386_RS01040 () | 37193..37582 | + | 390 | WP_020277950.1 | hypothetical protein | - |
| AM386_RS01045 () | 37579..38568 | + | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
| AM386_RS01050 () | 38581..39219 | + | 639 | WP_015065635.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM386_RS01055 () | 39278..41233 | + | 1956 | WP_020277951.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM386_RS01060 () | 41265..41519 | + | 255 | WP_049194392.1 | conjugal transfer protein TrbE | - |
| AM386_RS01065 () | 41497..41745 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| AM386_RS01070 () | 41758..42084 | + | 327 | WP_004144402.1 | hypothetical protein | - |
| AM386_RS01075 () | 42105..42857 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM386_RS01080 () | 42868..43107 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM386_RS01085 () | 43079..43636 | + | 558 | WP_032736782.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM386_RS01090 () | 43682..44125 | + | 444 | WP_020277953.1 | F-type conjugal transfer protein TrbF | - |
| AM386_RS01095 () | 44103..45482 | + | 1380 | WP_014343487.1 | conjugal transfer protein TraH | - |
| AM386_RS01100 () | 45482..48331 | + | 2850 | WP_020277954.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM386_RS01105 () | 48334..48867 | + | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| AM386_RS01110 () | 49053..49784 | + | 732 | WP_004152629.1 | complement resistance protein TraT | - |
| AM386_RS31440 () | 49977..50666 | + | 690 | WP_014343485.1 | hypothetical protein | - |
| AM386_RS01120 () | 50793..53105 | + | 2313 | Protein_68 | type IV conjugative transfer system coupling protein TraD | - |
| AM386_RS01125 () | 53105..58363 | + | 5259 | WP_047066489.1 | Multifunctional conjugation protein TraI | Relaxase |
| AM386_RS01130 () | 58443..59168 | + | 726 | WP_015065543.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| AM386_RS01135 () | 59324..59917 | + | 594 | WP_015065544.1 | fertility inhibition protein FinO | - |
| AM386_RS31025 () | 60078..60680 | + | 603 | WP_015065545.1 | hypothetical protein | - |
| AM386_RS01145 () | 60730..61374 | + | 645 | WP_004153014.1 | hypothetical protein | - |
| AM386_RS01150 () | 61430..62080 | + | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| AM386_RS01155 () | 62077..62385 | + | 309 | WP_015065549.1 | hypothetical protein | - |
| AM386_RS01160 () | 62661..64238 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| AM386_RS01165 () | 64548..65108 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| AM386_RS01170 () | 65112..68078 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM386_RS01175 () | 68206..68685 | + | 480 | WP_074194681.1 | Phospholipase D | VF |
| AM386_RS01180 () | 68821..69090 | + | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| AM386_RS01190 () | 69302..69379 | + | 78 | WP_014386216.1 | RepA leader peptide Tap | - |
| AM386_RS01195 () | 69372..69923 | + | 552 | WP_022631532.1 | hypothetical protein | - |
| AM386_RS01200 () | 69916..70929 | + | 1014 | WP_015065551.1 | replication protein | - |
| AM386_RS01205 () | 71917..72252 | - | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| AM386_RS01210 () | 72425..72706 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| AM386_RS01215 () | 72760..73074 | + | 315 | Protein_86 | DUF2913 family protein | - |
| AM386_RS01225 () | 73123..73827 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM386_RS01230 () | 73892..76135 | - | 2244 | Protein_88 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM386_RS01235 () | 76149..76481 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AM386_RS01240 () | 76528..77403 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| AM386_RS01245 () | 77659..78363 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM386_RS01250 () | 78427..78822 | + | 396 | Protein_92 | IS6-like element IS26 family transposase | - |
| AM386_RS31030 () | 78846..78976 | - | 131 | Protein_93 | IS5/IS1182 family transposase | - |
| AM386_RS01255 () | 79010..80151 | - | 1142 | Protein_94 | HlyD family secretion protein | - |
| AM386_RS01260 () | 80813..81691 | + | 879 | WP_009309916.1 | restriction endonuclease | - |
| AM386_RS01265 () | 81732..82148 | - | 417 | WP_032425563.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AM386_RS01270 () | 82145..82375 | - | 231 | WP_016338373.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AM386_RS01285 () | 82938..83156 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AM386_RS01290 () | 83158..83463 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AM386_RS01295 () | 83632..84027 | + | 396 | WP_017899885.1 | hypothetical protein | - |
| AM386_RS01300 () | 84054..84368 | + | 315 | WP_053389906.1 | hypothetical protein | - |
| AM386_RS01305 () | 84379..85395 | + | 1017 | WP_017899884.1 | hypothetical protein | - |
| AM386_RS01310 () | 85593..86387 | + | 795 | WP_004197635.1 | site-specific integrase | - |
| AM386_RS31445 () | 86819..87121 | - | 303 | WP_071571079.1 | hypothetical protein | - |
| AM386_RS01320 () | 87118..87744 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| AM386_RS01325 () | 88385..89260 | - | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|