MGE detailed information
MGE type: Genomic_island MGE length: 42362 bp
Accession: NZ_CP021844 Location: 4641448..4683809 Organism: Escherichia coli strain EC1515 Replicon: chromosome
Accession: NZ_CP021844 Location: 4641448..4683809 Organism: Escherichia coli strain EC1515 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDH89_RS23430 () | 4637398..4638222 | - | 825 | WP_001293448.1 | MurR/RpiR family transcriptional regulator | - |
| CDH89_RS23435 () | 4638388..4639944 | + | 1557 | WP_000983423.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| CDH89_RS23440 () | 4639944..4640633 | + | 690 | WP_073278785.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| CDH89_RS23445 () | 4641138..4641377 | + | 240 | WP_088172270.1 | MliC family protein | - |
| CDH89_RS23450 () | 4641448..4642194 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| CDH89_RS23455 () | 4642209..4643750 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| CDH89_RS23460 () | 4643949..4644143 | + | 195 | Protein_4323 | MliC family protein | - |
| CDH89_RS28355 () | 4644528..4644983 | - | 456 | WP_000884152.1 | sigma-70 family RNA polymerase sigma factor | - |
| CDH89_RS23470 () | 4645045..4646403 | - | 1359 | WP_000919997.1 | Adhesin YadA | VF |
| CDH89_RS23480 () | 4647226..4647339 | - | 114 | WP_131501864.1 | transposase | - |
| CDH89_RS23485 () | 4647602..4647778 | - | 177 | Protein_4327 | transketolase family protein | - |
| CDH89_RS23490 () | 4647838..4648529 | + | 692 | Protein_4328 | IS1 family transposase | - |
| CDH89_RS23495 () | 4648902..4649093 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| CDH89_RS23500 () | 4649162..4649410 | + | 249 | WP_001470076.1 | osmoprotectant transport activator ProQ | - |
| CDH89_RS23505 () | 4649429..4649977 | - | 549 | WP_001167422.1 | hypothetical protein | - |
| CDH89_RS28595 () | 4650065..4650223 | - | 159 | WP_000831911.1 | hypothetical protein | - |
| CDH89_RS23510 () | 4650220..4650456 | - | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| CDH89_RS23515 () | 4650525..4651100 | - | 576 | WP_061323289.1 | hypothetical protein | - |
| CDH89_RS23520 () | 4651348..4651914 | - | 567 | WP_001126820.1 | inovirus-type Gp2 protein | - |
| CDH89_RS23525 () | 4652989..4653960 | + | 972 | WP_021536680.1 | IS481 family transposase ISEc18 | Transposase |
| CDH89_RS23530 () | 4654317..4656950 | - | 2634 | WP_021536679.1 | restriction endonuclease | - |
| CDH89_RS23535 () | 4657266..4658424 | + | 1159 | Protein_4338 | IS30 family transposase | - |
| CDH89_RS23540 () | 4658566..4660083 | - | 1518 | WP_032147601.1 | hypothetical protein | - |
| CDH89_RS23545 () | 4660968..4661450 | + | 483 | WP_001605868.1 | hypothetical protein | - |
| CDH89_RS23550 () | 4661971..4662702 | - | 732 | WP_021559487.1 | inovirus Gp2 family protein | - |
| CDH89_RS23555 () | 4664202..4665332 | - | 1131 | WP_047928958.1 | hypothetical protein | - |
| CDH89_RS23560 () | 4665517..4666401 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| CDH89_RS23565 () | 4666604..4667284 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| CDH89_RS23570 () | 4667432..4668109 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| CDH89_RS23575 () | 4668139..4668348 | + | 210 | WP_032150870.1 | DUF905 family protein | - |
| CDH89_RS23580 () | 4668438..4669256 | + | 819 | WP_001175175.1 | DUF945 domain-containing protein | - |
| CDH89_RS23585 () | 4669348..4669833 | + | 486 | WP_000213722.1 | antirestriction protein | - |
| CDH89_RS23590 () | 4669848..4670324 | + | 477 | WP_001384029.1 | RadC family protein | - |
| CDH89_RS23595 () | 4670411..4670632 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| CDH89_RS23600 () | 4670712..4671080 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CDH89_RS23605 () | 4671170..4671547 | + | 378 | WP_039023548.1 | TA system toxin CbtA family protein | Toxin Detail |
| CDH89_RS28360 () | 4671544..4671714 | + | 171 | Protein_4353 | hypothetical protein | - |
| CDH89_RS23610 () | 4671769..4671966 | + | 198 | WP_088172489.1 | DUF957 domain-containing protein | - |
| CDH89_RS23615 () | 4672051..4672917 | + | 867 | WP_039023551.1 | DUF4942 domain-containing protein | - |
| CDH89_RS23620 () | 4672989..4673252 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CDH89_RS23625 () | 4673249..4673575 | + | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CDH89_RS23635 () | 4674458..4675996 | + | 1539 | WP_088172268.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CDH89_RS23645 () | 4676362..4677696 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CDH89_RS23650 () | 4677776..4679923 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CDH89_RS23655 () | 4679982..4681439 | + | 1458 | WP_000856835.1 | dipeptide/tripeptide permease DtpC | - |
| CDH89_RS23660 () | 4681676..4683193 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CDH89_RS23665 () | 4683312..4683485 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CDH89_RS23670 () | 4683513..4683809 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CDH89_RS23680 () | 4684036..4684308 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CDH89_RS23685 () | 4684320..4684550 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| CDH89_RS23690 () | 4684731..4686362 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| CDH89_RS23695 () | 4686359..4687078 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|