MGE detailed information
MGE type: Genomic_island MGE length: 9722 bp
Accession: NZ_CP021840 Location: 786195..795916 Organism: Escherichia coli strain EC974 Replicon: chromosome
Accession: NZ_CP021840 Location: 786195..795916 Organism: Escherichia coli strain EC974 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDH88_RS03980 () | 782027..783358 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| CDH88_RS03985 () | 783380..784369 | - | 990 | WP_000548345.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| CDH88_RS03990 () | 784468..785406 | - | 939 | WP_021577987.1 | transcriptional regulator TdcA | - |
| CDH88_RS28620 () | 785721..785939 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| CDH88_RS04000 () | 786195..786734 | + | 540 | WP_088172226.1 | hypothetical protein | - |
| CDH88_RS04005 () | 786756..787943 | + | 1188 | WP_021577988.1 | YhaC family protein | - |
| CDH88_RS04015 () | 788740..789885 | - | 1146 | WP_021577989.1 | glycerate 2-kinase | - |
| CDH88_RS04020 () | 789982..790872 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| CDH88_RS04025 () | 790902..791672 | - | 771 | WP_021577990.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| CDH88_RS04030 () | 791688..793022 | - | 1335 | WP_000599633.1 | galactarate/glucarate/glycerate transporter GarP | - |
| CDH88_RS04035 () | 793397..794968 | + | 1572 | WP_001273763.1 | galactarate dehydratase | - |
| CDH88_RS04040 () | 795117..795452 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| CDH88_RS04045 () | 795452..795916 | + | 465 | WP_021577991.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| CDH88_RS04050 () | 795971..796780 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| CDH88_RS04060 () | 797029..798309 | + | 1281 | WP_021577992.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| CDH88_RS04065 () | 798332..798805 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| CDH88_RS04070 () | 798816..799595 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| CDH88_RS04075 () | 799585..800463 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| CDH88_RS04080 () | 800481..800915 | + | 435 | WP_000948826.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.01 |