MGE detailed information
MGE type: Conjugative plasmid MGE length: 117703 bp
Accession: NZ_CP021737 Location: 1..117703 Organism: Escherichia coli strain AR_0150 Replicon: plasmid tig00000255
Accession: NZ_CP021737 Location: 1..117703 Organism: Escherichia coli strain AR_0150 Replicon: plasmid tig00000255
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM397_RS24985 () | 1862..2359 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| AM397_RS24990 () | 2391..3122 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| AM397_RS24995 () | 3375..5609 | + | 2235 | WP_062914766.1 | type IV conjugative transfer system coupling protein TraD | - |
| AM397_RS25000 () | 5618..6016 | - | 399 | WP_039023147.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| AM397_RS25005 () | 6016..6243 | - | 228 | WP_039023146.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| AM397_RS25010 () | 6325..11595 | + | 5271 | WP_039023145.1 | Multifunctional conjugation protein TraI | Relaxase |
| AM397_RS25015 () | 11871..13412 | + | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| AM397_RS25020 () | 13427..14173 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| AM397_RS25025 () | 14201..14947 | + | 747 | WP_052273601.1 | conjugal transfer pilus acetylase TraX | - |
| AM397_RS25030 () | 15002..15562 | + | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| AM397_RS25035 () | 15693..15902 | + | 210 | WP_039023209.1 | hypothetical protein | - |
| AM397_RS25040 () | 16314..16940 | + | 627 | WP_029702149.1 | hypothetical protein | - |
| AM397_RS25045 () | 17278..18258 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| AM397_RS25050 () | 18303..18860 | + | 558 | WP_087920820.1 | DUF2726 domain-containing protein | - |
| AM397_RS26965 () | 19235..19501 | + | 267 | WP_087757657.1 | hypothetical protein | - |
| - () | 19640..19701 | - | 62 | NuclAT_1 | - | - |
| - () | 19640..19701 | - | 62 | NuclAT_1 | - | - |
| - () | 19640..19701 | - | 62 | NuclAT_1 | - | - |
| - () | 19640..19701 | - | 62 | NuclAT_1 | - | - |
| AM397_RS25065 () | 19688..19894 | + | 207 | WP_032215358.1 | type I toxin-antitoxin system Hok family toxin | - |
| AM397_RS25070 () | 20178..20435 | + | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| AM397_RS25080 () | 20671..20745 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AM397_RS25085 () | 20738..21595 | + | 858 | WP_029702152.1 | incFII family plasmid replication initiator RepA | - |
| AM397_RS26970 () | 22296..22436 | + | 141 | WP_001347369.1 | hypothetical protein | - |
| AM397_RS25095 () | 22534..23187 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| AM397_RS26745 () | 23280..23537 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| AM397_RS25100 () | 23470..23871 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| AM397_RS25105 () | 24008..26905 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| AM397_RS25110 () | 27000..27605 | + | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| AM397_RS25115 () | 27629..28378 | - | 750 | Protein_26 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM397_RS25120 () | 28367..28774 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| AM397_RS25125 () | 28912..29796 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| AM397_RS25130 () | 29828..31027 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| AM397_RS25135 () | 31133..31783 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AM397_RS25140 () | 31815..32057 | - | 243 | WP_032140899.1 | hypothetical protein | - |
| AM397_RS25145 () | 32099..33613 | - | 1515 | Protein_32 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AM397_RS25155 () | 33679..34383 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM397_RS26975 () | 34436..34684 | - | 249 | Protein_34 | DUF3330 domain-containing protein | - |
| AM397_RS25170 () | 34887..35900 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| AM397_RS25175 () | 36058..36531 | + | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| AM397_RS25180 () | 36662..37450 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| AM397_RS25185 () | 37656..38003 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| AM397_RS25190 () | 37997..38836 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| AM397_RS25200 () | 38964..39167 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| AM397_RS25205 () | 39323..40528 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| AM397_RS25210 () | 40539..40844 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| AM397_RS26980 () | 40888..40953 | + | 66 | Protein_43 | EAL domain-containing protein | - |
| AM397_RS25220 () | 41071..41835 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| AM397_RS25230 () | 42328..42912 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| AM397_RS25235 () | 42912..44150 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| AM397_RS25240 () | 44147..45052 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| AM397_RS25250 () | 45174..45878 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM397_RS25255 () | 45936..48350 | + | 2415 | Protein_49 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| AM397_RS26750 () | 48384..48488 | + | 105 | Protein_50 | IS5/IS1182 family transposase | - |
| AM397_RS25260 () | 48638..49270 | - | 633 | Protein_51 | histidine-type phosphatase | - |
| AM397_RS25265 () | 49392..49877 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| AM397_RS25270 () | 49902..50387 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| AM397_RS25275 () | 50374..51069 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AM397_RS25280 () | 51074..52204 | - | 1131 | WP_000729219.1 | ABC transporter permease | - |
| AM397_RS25285 () | 52194..53477 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| AM397_RS25290 () | 53480..54859 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| AM397_RS25295 () | 54963..55490 | - | 528 | WP_000178050.1 | iron transporter | - |
| AM397_RS25300 () | 55531..57417 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| AM397_RS25310 () | 57764..58579 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| AM397_RS25315 () | 58762..59268 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| AM397_RS25320 () | 59258..59416 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| AM397_RS27175 () | 59566..59679 | - | 114 | Protein_63 | IS6 family transposase | - |
| AM397_RS25335 () | 59879..60576 | + | 698 | Protein_64 | IS1 family transposase IS1X2 | Transposase |
| AM397_RS25340 () | 60726..61412 | + | 687 | Protein_65 | IS1 family transposase IS1S | Transposase |
| AM397_RS25350 () | 61666..62688 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| AM397_RS25355 () | 62673..64238 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| AM397_RS25360 () | 64313..64729 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AM397_RS25365 () | 64726..64956 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AM397_RS25380 () | 65516..65734 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AM397_RS25385 () | 65736..66041 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AM397_RS25390 () | 66042..66848 | + | 807 | WP_000016970.1 | site-specific integrase | - |
| AM397_RS25395 () | 67570..68325 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| AM397_RS25400 () | 68913..70079 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| AM397_RS25405 () | 70079..71050 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AM397_RS25415 () | 71788..72690 | + | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| AM397_RS25420 () | 72694..72998 | + | 305 | Protein_77 | hypothetical protein | - |
| AM397_RS25425 () | 73075..73758 | + | 684 | WP_032181561.1 | DNA methylase | - |
| AM397_RS25430 () | 73759..73980 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| AM397_RS25435 () | 73994..74428 | + | 435 | WP_001546462.1 | DUF1380 family protein | - |
| AM397_RS25440 () | 74473..75243 | + | 771 | WP_001006251.1 | hypothetical protein | - |
| AM397_RS25450 () | 75780..76082 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| AM397_RS25455 () | 76129..76551 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| AM397_RS25460 () | 76548..76739 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| AM397_RS25465 () | 77011..77259 | - | 249 | WP_071781657.1 | hypothetical protein | - |
| AM397_RS25475 () | 77776..78006 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AM397_RS25480 () | 78058..79419 | + | 1362 | WP_039023242.1 | DUF3560 domain-containing protein | - |
| AM397_RS25485 () | 79467..80030 | + | 564 | WP_029702196.1 | class I SAM-dependent methyltransferase | - |
| AM397_RS26985 () | 80027..80296 | + | 270 | WP_198320064.1 | hypothetical protein | - |
| AM397_RS25500 () | 81397..81966 | - | 570 | WP_089634947.1 | hypothetical protein | - |
| AM397_RS25515 () | 83270..84028 | + | 759 | Protein_92 | site-specific integrase | - |
| AM397_RS25520 () | 84186..85196 | + | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| AM397_RS25525 () | 85292..87418 | + | 2127 | WP_000253905.1 | alpha-galactosidase | - |
| AM397_RS25530 () | 87481..88758 | + | 1278 | WP_001083369.1 | MFS transporter | - |
| AM397_RS25535 () | 88755..90188 | + | 1434 | WP_024170639.1 | glycoside hydrolase family 32 protein | - |
| AM397_RS25540 () | 90383..91777 | + | 1395 | WP_001037799.1 | carbohydrate porin | - |
| AM397_RS25545 () | 92023..92127 | - | 105 | Protein_98 | thiosulfate reductase cytochrome B subunit | - |
| AM397_RS25555 () | 92184..92877 | + | 694 | Protein_99 | IS1 family transposase IS1A | Transposase |
| AM397_RS25560 () | 92893..93516 | + | 624 | WP_000912556.1 | potassium channel family protein | - |
| AM397_RS25565 () | 93601..93852 | + | 252 | Protein_101 | iron-containing alcohol dehydrogenase | - |
| AM397_RS25570 () | 94141..94458 | - | 318 | Protein_102 | IS110 family transposase IS1618 | Transposase |
| AM397_RS25575 () | 94613..94718 | + | 106 | Protein_103 | plasmid SOS inhibition protein A | - |
| - () | 94687..94885 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 94687..94885 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 94687..94885 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 94687..94885 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| AM397_RS25580 () | 94950..95108 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| AM397_RS26990 () | 95776..95982 | + | 207 | WP_000275854.1 | hypothetical protein | - |
| AM397_RS25595 () | 96007..96294 | + | 288 | WP_000107242.1 | hypothetical protein | - |
| AM397_RS25600 () | 96413..97234 | + | 822 | WP_001234465.1 | DUF945 domain-containing protein | - |
| AM397_RS25605 () | 97530..98102 | - | 573 | WP_000949660.1 | hypothetical protein | VF |
| AM397_RS25610 () | 98472..98855 | + | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| AM397_RS25615 () | 99046..99693 | + | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| AM397_RS25620 () | 99829..100044 | + | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| AM397_RS25625 () | 100087..100452 | + | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| AM397_RS25630 () | 100467..100778 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| AM397_RS25635 () | 100800..101366 | + | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| AM397_RS25640 () | 101377..102081 | + | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| AM397_RS25645 () | 102081..103508 | + | 1428 | WP_001553836.1 | conjugal transfer protein TraB | - |
| AM397_RS25650 () | 103498..104088 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| AM397_RS26775 () | 104075..104212 | + | 138 | WP_001553834.1 | conjugal transfer protein TrbD | - |
| AM397_RS25655 () | 104234..104395 | + | 162 | WP_000741714.1 | conjugal transfer protein TrbD | - |
| AM397_RS25660 () | 104388..104639 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| AM397_RS25665 () | 104636..105151 | + | 516 | WP_000809832.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM397_RS25670 () | 105286..105507 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| AM397_RS25675 () | 105667..108294 | + | 2628 | WP_001064264.1 | type IV secretion system protein TraC | - |
| AM397_RS25680 () | 108291..108677 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| AM397_RS25685 () | 108674..109306 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| AM397_RS25690 () | 109303..110295 | + | 993 | WP_001553833.1 | conjugal transfer pilus assembly protein TraU | - |
| AM397_RS25695 () | 110304..110942 | + | 639 | WP_001553832.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM397_RS25700 () | 110939..112747 | + | 1809 | WP_039023153.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM397_RS25705 () | 112774..113031 | + | 258 | WP_039023152.1 | conjugal transfer protein TrbE | - |
| AM397_RS25710 () | 113024..113767 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM397_RS25715 () | 113783..114130 | + | 348 | WP_001287894.1 | conjugal transfer protein TrbA | - |
| AM397_RS25720 () | 114249..114533 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM397_RS25725 () | 114520..115065 | + | 546 | WP_016236310.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM397_RS25730 () | 114995..115357 | + | 363 | WP_071550055.1 | P-type conjugative transfer protein TrbJ | - |
| AM397_RS25735 () | 115357..116730 | + | 1374 | WP_039023150.1 | conjugal transfer protein TraH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|