NZ_CP0217281..169487

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 169487 bp
Accession: NZ_CP021728        Location: 1..169487         Organism: Escherichia coli strain Combat11I9       Replicon: plasmid pCombat11I9-2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CDC27_RS26715 () 1..261 + 261 WP_000083818.1 replication regulatory protein RepA -
CDC27_RS26725 () 487..561 + 75 WP_001365705.1 RepA leader peptide Tap -
CDC27_RS26730 () 554..1411 + 858 WP_000130940.1 incFII family plasmid replication initiator RepA -
CDC27_RS29290 () 2115..2273 + 159 WP_000841008.1 hypothetical protein -
CDC27_RS26750 () 2570..2923 + 354 WP_001114073.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
CDC27_RS26755 () 2971..3333 + 363 WP_000783215.1 arsenite efflux transporter metallochaperone ArsD -
CDC27_RS26760 () 3351..5102 + 1752 WP_001556710.1 arsenite efflux transporter ATPase subunit ArsA -
CDC27_RS26765 () 5151..5303 + 153 Protein_7 arsenical efflux pump membrane protein ArsB -
CDC27_RS26770 () 5500..6384 + 885 WP_000058717.1 EamA family transporter -
CDC27_RS26775 () 6416..7615 - 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
CDC27_RS26780 () 7721..8371 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
CDC27_RS26785 () 8403..8645 - 243 WP_000844627.1 transposase -
CDC27_RS26790 () 8703..10217 - 1515 Protein_12 Tn3 family transposase TnpA_TnAs1 Transposase
CDC27_RS26795 () 10283..10987 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CDC27_RS26805 () 10997..11467 + 471 WP_049824851.1 TetR family transcriptional regulator -
CDC27_RS26810 () 11487..12275 + 789 WP_014839978.1 winged helix-turn-helix domain-containing protein -
CDC27_RS26815 () 12275..12793 + 519 WP_014839979.1 hypothetical protein -
CDC27_RS26820 () 12798..13214 - 417 WP_014839980.1 Glutathione transferase FosA ARG
CDC27_RS26825 () 13600..14304 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
CDC27_RS26840 () 14565..15980 + 1416 WP_001257292.1 IncHI-type conjugal transfer protein TrhH -
CDC27_RS26845 () 15989..19942 + 3954 WP_046788498.1 conjugal transfer protein TraG N-terminal domain-containing protein -
CDC27_RS26850 () 20123..21412 + 1290 WP_001284752.1 HNH endonuclease -
CDC27_RS26855 () 21520..22038 - 519 WP_015059500.1 hypothetical protein -
CDC27_RS26860 () 22169..22708 - 540 WP_000494967.1 hypothetical protein VF
CDC27_RS26865 () 22856..23605 + 750 WP_000720274.1 thioredoxin fold domain-containing protein -
CDC27_RS26870 () 23630..24022 + 393 WP_000843244.1 hypothetical protein -
CDC27_RS26875 () 24056..24478 + 423 WP_000025803.1 hypothetical protein -
CDC27_RS26880 () 24538..25149 - 612 WP_000620990.1 hypothetical protein -
CDC27_RS26885 () 25256..26065 + 810 WP_000031377.1 DsbA family protein -
CDC27_RS26890 () 26111..27370 - 1260 WP_042634445.1 translesion error-prone DNA polymerase V subunit UmuC -
CDC27_RS26895 () 27354..27788 - 435 WP_000111290.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CDC27_RS26900 () 27982..28599 + 618 WP_001130842.1 hypothetical protein -
CDC27_RS26905 () 28749..29105 + 357 WP_000770127.1 hypothetical protein -
CDC27_RS29080 () 29356..29526 + 171 WP_152919720.1 hypothetical protein -
CDC27_RS26910 () 29563..30267 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
CDC27_RS26920 () 30369..30848 + 480 WP_000888203.1 Rrf2 family transcriptional regulator -
CDC27_RS26925 () 30918..34070 - 3153 WP_000347934.1 Efflux pump membrane transporter BepE VF
CDC27_RS26930 () 34094..35269 - 1176 WP_002914189.1 Efflux pump periplasmic linker BepF VF
CDC27_RS26935 () 35589..36293 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
CDC27_RS26940 () 36628..37020 + 393 WP_057109146.1 pyridoxamine 5'-phosphate oxidase family protein -
CDC27_RS26945 () 37340..37726 - 387 WP_063102497.1 bleomycin binding protein -
CDC27_RS26955 () 37920..38623 - 704 Protein_41 IS6 family transposase -
CDC27_RS26960 () 38691..39989 + 1299 Protein_42 Tn3 family transposase TnpA_Tn3 Transposase
CDC27_RS26965 () 40014..40178 - 165 WP_072644484.1 cupin domain-containing protein -
CDC27_RS26970 () 40159..40365 + 207 Protein_44 QacE family quaternary ammonium compound efflux SMR transporter -
CDC27_RS26975 () 40359..41198 + 840 WP_000259031.1 Dihydropteroate synthase ARG
CDC27_RS26985 () 41326..41529 + 204 WP_000376616.1 hypothetical protein -
CDC27_RS26990 () 41754..42458 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
CDC27_RS27000 () 42615..43175 - 561 WP_003124096.1 Tn3 family transposase TnpR_TnAs3 Transposase
CDC27_RS29085 () 43306..43656 - 351 WP_000454193.1 DUF3330 domain-containing protein -
CDC27_RS27010 () 43859..44872 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
CDC27_RS27015 () 45030..45503 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
CDC27_RS27020 () 45729..46433 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
CDC27_RS27025 () 46486..47241 + 756 Protein_53 IS110 family transposase IS5075 Transposase
CDC27_RS27030 () 47423..47599 - 177 WP_000954592.1 Arm DNA-binding domain-containing protein -
CDC27_RS27040 () 47929..48744 + 816 WP_001043260.1 Dihydropteroate synthase ARG
CDC27_RS27045 () 48808..49611 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
CDC27_RS27050 () 49611..50447 + 837 WP_000480968.1 hypothetical protein ARG
CDC27_RS27065 () 50613..51317 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
CDC27_RS27070 () 51386..51568 - 183 Protein_59 IS6 family transposase IS15 Transposase
CDC27_RS27075 () 52061..52411 + 351 WP_000493379.1 hypothetical protein -
CDC27_RS27080 () 52455..53144 + 690 WP_000796228.1 hypothetical protein -
CDC27_RS27085 () 53141..53932 + 792 WP_000016493.1 site-specific integrase -
CDC27_RS27090 () 54110..54463 + 354 WP_000864812.1 colicin M immunity protein -
CDC27_RS27095 () 54513..55328 - 816 WP_032494162.1 lipid II-degrading bacteriocin colicin M -
CDC27_RS27105 () 55572..56099 + 528 WP_000203272.1 colicin B immunity protein -
CDC27_RS27110 () 56117..56284 - 168 Protein_66 colicin-B -
CDC27_RS27115 () 56457..56738 + 282 WP_001105066.1 hypothetical protein -
CDC27_RS29090 () 57202..57438 + 237 WP_014640552.1 colicin V immunity protein -
CDC27_RS27125 () 57416..57727 + 312 WP_001259758.1 colicin V -
CDC27_RS27130 () 57897..60011 - 2115 WP_109045958.1 peptidase domain-containing ABC transporter -
CDC27_RS27135 () 59986..61260 - 1275 WP_000489607.1 HlyD family secretion protein -
CDC27_RS27145 () 63207..63476 + 270 WP_000079941.1 hypothetical protein Antitoxin Detail
CDC27_RS27150 () 63473..63754 + 282 WP_042033558.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
CDC27_RS27155 () 63800..64648 + 849 WP_001058005.1 3'-5' exonuclease -
CDC27_RS27160 () 64765..65247 + 483 WP_001311056.1 hypothetical protein -
CDC27_RS27170 () 65549..65896 + 348 WP_000142437.1 hypothetical protein -
CDC27_RS27175 () 66282..67313 - 1032 WP_001752311.1 IS630 family transposase ISEc33 Transposase
CDC27_RS27185 () 67610..68644 + 1035 WP_001190234.1 3-deoxy-7-phosphoheptulonate synthase -
CDC27_RS27205 () 69162..69866 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CDC27_RS27215 () 70327..72504 + 2178 WP_094317250.1 Ferric enterobactin receptor VF
CDC27_RS27220 () 72549..73505 - 957 WP_000271276.1 Ferri-bacillibactin esterase BesA VF
CDC27_RS27225 () 73590..74819 - 1230 WP_000933675.1 Enterochelin esterase VF
CDC27_RS27230 () 74923..78582 - 3660 WP_001111199.1 Multidrug efflux ATP-binding/permease protein VF
CDC27_RS27235 () 78722..79837 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
CDC27_RS27245 () 81073..82174 - 1102 Protein_86 IS481 family transposase ISKpn28 Transposase
CDC27_RS27255 () 82728..82927 + 200 Protein_87 lysis system i-spanin subunit Rz -
CDC27_RS27260 () 82985..83278 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
CDC27_RS27265 () 83905..85133 + 1229 WP_172692619.1 IS3 family transposase IS2 Transposase
CDC27_RS27275 () 86356..87549 + 1194 WP_000450494.1 GTP-binding protein -
CDC27_RS27280 () 87727..87876 + 150 Protein_91 IS3 family transposase IS2 Transposase
CDC27_RS27285 () 88186..89575 + 1390 Protein_92 ISNCY family transposase ISKpn21 Transposase
CDC27_RS27295 () 89810..90751 + 942 Protein_93 hypothetical protein -
CDC27_RS27300 () 90880..91074 - 195 Protein_94 IS200-IS605 family transposase IS200C Transposase
CDC27_RS27310 () 91548..92918 - 1371 WP_001312828.1 efflux transporter outer membrane subunit -
CDC27_RS27315 () 92922..94862 - 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
CDC27_RS27320 () 94859..96046 - 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
CDC27_RS27325 () 97027..97352 + 326 Protein_98 IS3 family transposase IS911 Transposase
CDC27_RS27335 () 98897..99055 + 159 WP_001312823.1 integrase core domain-containing protein -
CDC27_RS27350 () 100328..101281 + 954 WP_000280980.1 Protease 7 VF
CDC27_RS27360 () 101714..102823 + 1110 WP_000771475.1 SDR family oxidoreductase -
CDC27_RS27365 () 102892..103794 + 903 WP_001312822.1 hypothetical protein VF
CDC27_RS27370 () 104168..104356 + 189 WP_001312821.1 hypothetical protein -
CDC27_RS27375 () 104477..105217 + 741 WP_001066954.1 tyrosine-type recombinase/integrase -
CDC27_RS27380 () 105502..106479 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
CDC27_RS27390 () 107225..107548 + 324 Protein_107 IS21 family transposase IS21 Transposase
CDC27_RS29295 () 107550..107654 + 105 Protein_108 AAA family ATPase -
CDC27_RS27400 () 107715..108228 + 514 Protein_109 DUF4113 domain-containing protein -
CDC27_RS27405 () 108408..109105 - 698 Protein_110 IS1 family transposase IS1G Transposase
CDC27_RS27420 () 109461..110375 + 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
CDC27_RS27425 () 110375..111202 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
CDC27_RS27430 () 111199..112056 + 858 WP_000992806.1 Manganese transport system membrane protein MntB ARG
CDC27_RS27435 () 112053..112910 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
CDC27_RS27440 () 113144..113401 - 258 Protein_115 Tn3 family transposase -
CDC27_RS27445 () 113399..113530 + 132 Protein_116 phosphopyruvate hydratase -
CDC27_RS27450 () 113527..113754 - 228 Protein_117 malate dehydrogenase -
CDC27_RS27470 () 114373..115070 + 698 Protein_118 IS1 family transposase IS1R Transposase
CDC27_RS27475 () 115370..116536 + 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
CDC27_RS27480 () 116536..117507 + 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
CDC27_RS29300 () 118534..118872 + 339 WP_001513511.1 hypothetical protein -
CDC27_RS27495 () 118941..119273 + 333 Protein_122 hypothetical protein -
CDC27_RS27505 () 119327..120024 + 698 Protein_123 IS1 family transposase IS1G Transposase
CDC27_RS27510 () 120036..120293 + 258 Protein_124 hypothetical protein -
CDC27_RS27515 () 120306..120518 + 213 WP_000092896.1 hypothetical protein -
CDC27_RS27520 () 120779..121750 - 972 WP_000082154.1 IS110 family transposase ISEc32 Transposase
CDC27_RS27530 () 122275..122577 + 303 WP_072256028.1 antirestriction protein -
CDC27_RS27535 () 122577..123038 + 462 WP_042007484.1 DUF1380 family protein -
CDC27_RS27540 () 123038..123220 + 183 WP_001027505.1 hypothetical protein -
CDC27_RS29305 () 123208..123536 - 329 Protein_130 pilus assembly protein -
CDC27_RS27560 () 124214..124444 + 231 WP_000218642.1 hypothetical protein -
CDC27_RS27565 () 124496..125857 + 1362 WP_000170681.1 DUF3560 domain-containing protein -
CDC27_RS27570 () 125903..126466 + 564 WP_001311069.1 class I SAM-dependent methyltransferase -
CDC27_RS27580 () 126618..126866 + 249 WP_002433376.1 hypothetical protein -
CDC27_RS27600 () 127339..127866 + 528 WP_000290793.1 single-stranded DNA-binding protein -
CDC27_RS27605 () 127922..128155 + 234 WP_000006004.1 DUF905 domain-containing protein -
CDC27_RS27610 () 128214..129468 + 1255 Protein_137 ParB/RepB/Spo0J family partition protein -
CDC27_RS27615 () 129523..129957 + 435 WP_000845901.1 conjugation system SOS inhibitor PsiB -
CDC27_RS27620 () 129954..130673 + 720 WP_001276234.1 plasmid SOS inhibition protein A -
CDC27_RS29105 () 130685..130873 - 189 WP_001299721.1 hypothetical protein -
- () 130685..130909 + 225 NuclAT_0 - -
- () 130685..130909 + 225 NuclAT_0 - -
- () 130685..130909 + 225 NuclAT_0 - -
- () 130685..130909 + 225 NuclAT_0 - -
CDC27_RS27625 () 130953..131111 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
CDC27_RS29310 () 131802..132008 + 207 WP_000547939.1 hypothetical protein -
CDC27_RS27645 () 132033..132320 + 288 WP_000107535.1 hypothetical protein -
CDC27_RS27650 () 132441..133262 + 822 WP_001234469.1 DUF945 domain-containing protein -
CDC27_RS27655 () 133559..134161 - 603 WP_000243709.1 hypothetical protein VF
CDC27_RS27660 () 134482..134865 + 384 WP_001151524.1 relaxosome protein TraM -
CDC27_RS27665 () 135052..135741 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
CDC27_RS27670 () 135840..136235 + 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
CDC27_RS27675 () 136268..136633 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
CDC27_RS27680 () 136648..136959 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
CDC27_RS27685 () 136981..137547 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
CDC27_RS27690 () 137534..138263 + 730 Protein_152 type-F conjugative transfer system secretin TraK -
CDC27_RS27695 () 138263..139690 + 1428 WP_094317236.1 conjugal transfer protein TraB -
CDC27_RS27700 () 139680..140270 + 591 WP_000002792.1 conjugal transfer protein TraP -
CDC27_RS27705 () 140224..140454 + 231 WP_001352845.1 conjugal transfer protein TrbD -
CDC27_RS27710 () 140466..140717 + 252 WP_001038342.1 conjugal transfer protein TrbG -
CDC27_RS27715 () 140714..141229 + 516 WP_000809841.1 type IV conjugative transfer system lipoprotein TraV -
CDC27_RS27720 () 141364..141585 + 222 WP_001278689.1 conjugal transfer protein TraR -
CDC27_RS27725 () 141745..144372 + 2628 WP_001064247.1 type IV secretion system protein TraC -
CDC27_RS27730 () 144369..144755 + 387 WP_000097319.1 type-F conjugative transfer system protein TrbI -
CDC27_RS27735 () 144752..145384 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
CDC27_RS27740 () 145381..146373 + 993 WP_000830187.1 conjugal transfer pilus assembly protein TraU -
CDC27_RS27745 () 146382..147020 + 639 WP_000777688.1 type-F conjugative transfer system pilin assembly protein TrbC -
CDC27_RS27750 () 147017..148825 + 1809 WP_000821847.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CDC27_RS27755 () 148852..149109 + 258 WP_000864318.1 conjugal transfer protein TrbE -
CDC27_RS27760 () 149102..149845 + 744 WP_001030367.1 type-F conjugative transfer system pilin assembly protein TraF -
CDC27_RS27765 () 149861..150208 + 348 WP_001287913.1 conjugal transfer protein TrbA -
CDC27_RS27770 () 150210..150524 - 315 WP_094317235.1 toxin ArtA -
CDC27_RS27775 () 150605..150889 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
CDC27_RS27780 () 150876..151421 + 546 WP_094317306.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CDC27_RS27785 () 151351..151692 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
CDC27_RS27790 () 151646..152060 + 415 Protein_172 F-type conjugal transfer protein TrbF -
CDC27_RS27795 () 152060..153433 + 1374 WP_021553026.1 conjugal transfer protein TraH -
CDC27_RS27800 () 153430..156246 + 2817 WP_001007054.1 conjugal transfer mating pair stabilization protein TraG -
CDC27_RS27805 () 156279..156800 + 522 WP_000632670.1 conjugal transfer entry exclusion protein TraS -
CDC27_RS27810 () 156825..157556 + 732 WP_000850422.1 complement resistance protein TraT -
CDC27_RS27815 () 157809..159962 + 2154 WP_000009350.1 type IV conjugative transfer system coupling protein TraD -
CDC27_RS27820 () 159971..160369 - 399 WP_000911324.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
CDC27_RS27825 () 160369..160596 - 228 WP_000450532.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
CDC27_RS27830 () 160678..165948 + 5271 WP_011117356.1 Multifunctional conjugation protein TraI Relaxase
CDC27_RS27835 () 165968..166714 + 747 WP_148119535.1 conjugal transfer pilus acetylase TraX -
CDC27_RS27840 () 166769..167329 + 561 WP_000139359.1 fertility inhibition protein FinO -
CDC27_RS27845 () 167467..167679 + 213 WP_012311405.1 hypothetical protein -
CDC27_RS27850 () 167922..168383 + 462 WP_001233871.1 thermonuclease family protein -
CDC27_RS27855 () 168429..168638 + 210 WP_001333231.1 hemolysin expression modulator Hha -
CDC27_RS27860 () 168676..169249 + 574 Protein_186 DUF2726 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance