MGE detailed information
MGE type: Prophage MGE length: 96225 bp
Accession: NZ_CP021644 Location: 947234..1043458 Organism: Glaesserella parasuis 29755 Replicon: chromosome
Accession: NZ_CP021644 Location: 947234..1043458 Organism: Glaesserella parasuis 29755 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4U42_RS04930 () | 944829..945212 | + | 384 | WP_005713730.1 | 30S ribosome-binding factor RbfA | - |
| B4U42_RS04935 () | 945215..946132 | + | 918 | WP_005713728.1 | tRNA pseudouridine(55) synthase TruB | - |
| B4U42_RS04940 () | 946142..947224 | + | 1083 | WP_026916886.1 | lytic murein transglycosylase | - |
| B4U42_RS04945 () | 947234..948052 | + | 819 | WP_005713726.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| B4U42_RS04955 () | 948440..949684 | + | 1245 | Protein_904 | Prophage integrase IntA ; Integrase | Integrase |
| B4U42_RS04960 () | 949673..949876 | - | 204 | WP_005713720.1 | hypothetical protein | - |
| B4U42_RS04965 () | 949965..950568 | - | 604 | Protein_906 | Bro-N domain-containing protein | - |
| B4U42_RS04970 () | 951153..951687 | - | 535 | Protein_907 | hypothetical protein | - |
| B4U42_RS04975 () | 951943..952185 | - | 243 | WP_005713710.1 | hypothetical protein | - |
| B4U42_RS04980 () | 952528..952749 | - | 222 | WP_020997039.1 | hypothetical protein | - |
| B4U42_RS04985 () | 952764..952949 | + | 186 | WP_020997221.1 | YegP family protein | - |
| B4U42_RS04990 () | 952975..953418 | - | 444 | WP_131320163.1 | hypothetical protein | - |
| B4U42_RS04995 () | 953866..954312 | - | 447 | WP_005714539.1 | hypothetical protein | - |
| B4U42_RS05000 () | 954372..954662 | + | 291 | WP_005714537.1 | putative addiction module antidote protein | - |
| B4U42_RS05005 () | 954690..955529 | - | 840 | WP_005714536.1 | DUF3800 domain-containing protein | - |
| B4U42_RS05010 () | 955710..956558 | - | 849 | WP_005714534.1 | KilA-N domain-containing protein | - |
| B4U42_RS05015 () | 956658..957341 | - | 684 | WP_005714533.1 | helix-turn-helix transcriptional regulator | - |
| B4U42_RS05020 () | 957472..957672 | + | 201 | WP_005714531.1 | helix-turn-helix domain-containing protein | - |
| B4U42_RS12365 () | 957693..957950 | + | 258 | Protein_918 | hypothetical protein | - |
| B4U42_RS05025 () | 958008..958733 | + | 726 | WP_016527921.1 | Rha family transcriptional regulator | - |
| B4U42_RS05030 () | 958730..959560 | + | 831 | WP_020997223.1 | hypothetical protein | - |
| B4U42_RS05035 () | 959560..960231 | + | 672 | WP_005715017.1 | replication protein P | - |
| B4U42_RS05040 () | 960293..960721 | + | 429 | WP_005715214.1 | recombination protein NinB | - |
| B4U42_RS05045 () | 960755..961168 | - | 414 | WP_005715065.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| B4U42_RS05050 () | 961195..961377 | - | 183 | WP_005715063.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| B4U42_RS05055 () | 961625..962194 | + | 570 | WP_035703519.1 | recombination protein NinG | - |
| B4U42_RS05060 () | 962191..962568 | + | 378 | WP_020997228.1 | sigma-70 family RNA polymerase sigma factor | - |
| B4U42_RS05065 () | 962625..963833 | - | 1209 | WP_112065003.1 | IS256 family transposase IS1414 | Transposase |
| B4U42_RS05070 () | 963900..964118 | - | 219 | WP_005714782.1 | hypothetical protein | - |
| B4U42_RS12370 () | 964415..964591 | + | 177 | WP_005714781.1 | hypothetical protein | - |
| B4U42_RS05075 () | 964973..965536 | - | 564 | WP_005714778.1 | hypothetical protein | - |
| B4U42_RS05080 () | 965650..965925 | + | 276 | WP_010786311.1 | hypothetical protein | - |
| B4U42_RS05085 () | 965900..966445 | + | 546 | WP_112065004.1 | lysozyme | - |
| B4U42_RS05090 () | 966418..966762 | + | 345 | WP_021109620.1 | DUF2570 family protein | - |
| B4U42_RS05095 () | 966725..966940 | + | 216 | WP_204355920.1 | hypothetical protein | - |
| B4U42_RS05100 () | 967327..967842 | + | 516 | WP_005715031.1 | terminase small subunit | - |
| B4U42_RS05105 () | 967826..969043 | + | 1218 | WP_040978479.1 | PBSX family phage terminase large subunit | - |
| B4U42_RS05110 () | 969049..970569 | + | 1521 | WP_005713544.1 | DUF1073 domain-containing protein | - |
| B4U42_RS05115 () | 970532..971398 | + | 867 | WP_005713545.1 | minor capsid protein | - |
| B4U42_RS05120 () | 971498..972769 | + | 1272 | WP_005713547.1 | DUF2213 domain-containing protein | - |
| B4U42_RS05125 () | 972781..973293 | + | 513 | WP_005713548.1 | hypothetical protein | - |
| B4U42_RS05130 () | 973314..974447 | + | 1134 | WP_005713549.1 | DUF2184 domain-containing protein | - |
| B4U42_RS05135 () | 974511..974876 | + | 366 | WP_005713552.1 | hypothetical protein | - |
| B4U42_RS05140 () | 974879..975307 | + | 429 | WP_005713553.1 | DUF4054 domain-containing protein | - |
| B4U42_RS05145 () | 975304..975804 | + | 501 | WP_005713554.1 | hypothetical protein | - |
| B4U42_RS05150 () | 975804..976361 | + | 558 | WP_005713559.1 | hypothetical protein | - |
| B4U42_RS05160 () | 976913..977293 | + | 381 | WP_020997284.1 | hypothetical protein | - |
| B4U42_RS05165 () | 977278..977784 | + | 507 | WP_005713566.1 | hypothetical protein | - |
| B4U42_RS05170 () | 977794..979272 | + | 1479 | WP_005713567.1 | DUF3383 domain-containing protein | - |
| B4U42_RS05175 () | 979340..979783 | + | 444 | WP_005713568.1 | hypothetical protein | - |
| B4U42_RS05180 () | 979917..980321 | + | 405 | WP_005713569.1 | hypothetical protein | - |
| B4U42_RS12375 () | 980348..980500 | + | 153 | WP_005713570.1 | hypothetical protein | - |
| B4U42_RS05185 () | 980493..982997 | + | 2505 | WP_005713572.1 | hypothetical protein | - |
| B4U42_RS05195 () | 983179..983457 | - | 279 | WP_005713576.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| B4U42_RS05200 () | 983417..983662 | - | 246 | WP_005713578.1 | ribbon-helix-helix domain-containing protein | - |
| B4U42_RS05205 () | 983888..984475 | + | 588 | Protein_955 | hypothetical protein | - |
| B4U42_RS05210 () | 984583..984891 | + | 309 | WP_005713581.1 | hypothetical protein | - |
| B4U42_RS05215 () | 984893..985780 | + | 888 | WP_005713583.1 | hypothetical protein | - |
| B4U42_RS05220 () | 985791..986447 | + | 657 | WP_106382554.1 | phage baseplate protein | - |
| B4U42_RS05225 () | 986451..986801 | + | 351 | WP_005713587.1 | hypothetical protein | - |
| B4U42_RS05230 () | 986798..987985 | + | 1188 | WP_005713589.1 | baseplate J/gp47 family protein | - |
| B4U42_RS05235 () | 987982..988599 | + | 618 | WP_005713594.1 | DUF2612 domain-containing protein | - |
| B4U42_RS05240 () | 989082..990827 | + | 1746 | Protein_962 | tail fiber protein | - |
| B4U42_RS05245 () | 990837..991403 | + | 567 | WP_112065005.1 | DUF4376 domain-containing protein | - |
| B4U42_RS05250 () | 991396..991857 | + | 462 | WP_112065006.1 | enoyl-CoA hydratase | - |
| B4U42_RS05255 () | 992036..992335 | - | 300 | WP_005714863.1 | hypothetical protein | - |
| B4U42_RS05260 () | 992332..992841 | - | 510 | WP_005714861.1 | MazG-like family protein | - |
| B4U42_RS05265 () | 993004..993096 | - | 93 | Protein_967 | bacteriocin | - |
| B4U42_RS05270 () | 993358..994638 | - | 1281 | WP_005714408.1 | hypothetical protein | - |
| B4U42_RS05275 () | 994759..995166 | - | 408 | WP_005714406.1 | hypothetical protein | - |
| B4U42_RS05280 () | 995166..995360 | - | 195 | WP_005714404.1 | hypothetical protein | - |
| B4U42_RS05285 () | 995527..996057 | - | 531 | WP_035703524.1 | DUF4760 domain-containing protein | - |
| B4U42_RS05290 () | 996278..997075 | - | 798 | WP_005714398.1 | hypothetical protein | - |
| B4U42_RS05295 () | 997465..997683 | + | 219 | WP_012621817.1 | hypothetical protein | - |
| B4U42_RS05300 () | 997827..998090 | - | 264 | WP_005712171.1 | hypothetical protein | - |
| B4U42_RS05305 () | 998059..998703 | - | 645 | WP_005712172.1 | N-6 DNA methylase | - |
| B4U42_RS05310 () | 998705..999487 | - | 783 | WP_005712174.1 | hypothetical protein | - |
| B4U42_RS05315 () | 999524..1000333 | - | 810 | WP_112065007.1 | hypothetical protein | - |
| B4U42_RS05320 () | 1000677..1000865 | + | 189 | WP_010786201.1 | hypothetical protein | - |
| B4U42_RS05325 () | 1000907..1001521 | - | 615 | WP_005714752.1 | YqaJ viral recombinase family protein | - |
| B4U42_RS05330 () | 1001518..1002384 | - | 867 | WP_005714753.1 | phage recombination protein Bet | - |
| B4U42_RS05335 () | 1002394..1003326 | - | 933 | WP_016527910.1 | hypothetical protein | - |
| B4U42_RS12250 () | 1003341..1003478 | - | 138 | WP_005714736.1 | hypothetical protein | - |
| B4U42_RS05340 () | 1003465..1004004 | - | 540 | WP_005714734.1 | hypothetical protein | - |
| B4U42_RS05345 () | 1004001..1004321 | - | 321 | WP_005714732.1 | hypothetical protein | - |
| B4U42_RS05350 () | 1004404..1005030 | - | 627 | WP_005714731.1 | KilA-N domain-containing protein | - |
| B4U42_RS05355 () | 1005291..1006004 | - | 714 | WP_005714812.1 | serine/threonine-protein phosphatase | - |
| B4U42_RS05360 () | 1006009..1006767 | - | 759 | Protein_987 | Serine/threonine-protein kinase PknA | VF |
| B4U42_RS05365 () | 1006899..1007540 | - | 642 | WP_035494774.1 | DUF3560 domain-containing protein | - |
| B4U42_RS05375 () | 1007958..1008179 | - | 222 | WP_016527867.1 | hypothetical protein | - |
| B4U42_RS05380 () | 1008194..1008379 | + | 186 | WP_020997221.1 | YegP family protein | - |
| B4U42_RS05385 () | 1008405..1008692 | - | 288 | WP_012621801.1 | hypothetical protein | - |
| B4U42_RS12255 () | 1008714..1008935 | - | 222 | WP_162627882.1 | hypothetical protein | - |
| B4U42_RS05390 () | 1009213..1009677 | - | 465 | WP_005714819.1 | hypothetical protein | - |
| B4U42_RS05395 () | 1009661..1010608 | - | 948 | WP_005714821.1 | hypothetical protein | - |
| B4U42_RS05400 () | 1010648..1011301 | - | 654 | WP_005714960.1 | LexA family transcriptional regulator | - |
| B4U42_RS05405 () | 1011437..1011643 | + | 207 | WP_005714958.1 | helix-turn-helix transcriptional regulator | - |
| B4U42_RS05410 () | 1011664..1011939 | + | 276 | WP_020997037.1 | bacteriophage CII family protein | - |
| B4U42_RS05415 () | 1011984..1012670 | + | 687 | WP_035703224.1 | phage antirepressor KilAC domain-containing protein | - |
| B4U42_RS05420 () | 1012667..1013491 | + | 825 | WP_020997035.1 | replication protein | - |
| B4U42_RS05425 () | 1013491..1014162 | + | 672 | WP_020997224.1 | replication P family protein | - |
| B4U42_RS05430 () | 1014163..1014723 | + | 561 | WP_005714434.1 | N-6-adenine methyltransferase | - |
| B4U42_RS05440 () | 1015025..1015474 | + | 450 | WP_112065008.1 | recombination protein NinB | - |
| B4U42_RS05445 () | 1015508..1015915 | - | 408 | WP_005714429.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| B4U42_RS05450 () | 1015954..1016121 | - | 168 | WP_200859958.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| B4U42_RS05455 () | 1016227..1016517 | + | 291 | WP_005714426.1 | DUF1364 domain-containing protein | - |
| B4U42_RS05460 () | 1016514..1016918 | + | 405 | WP_005714425.1 | RusA family crossover junction endodeoxyribonuclease | - |
| B4U42_RS05465 () | 1016915..1017292 | + | 378 | WP_005714424.1 | antitermination protein | - |
| B4U42_RS05470 () | 1017301..1017486 | - | 186 | WP_005714422.1 | hypothetical protein | - |
| B4U42_RS05475 () | 1017869..1018327 | + | 459 | WP_005714420.1 | hypothetical protein | - |
| B4U42_RS05480 () | 1018414..1018611 | - | 198 | WP_005714419.1 | hypothetical protein | - |
| B4U42_RS05485 () | 1018656..1019483 | + | 828 | WP_005714418.1 | phage antirepressor N-terminal domain-containing protein | - |
| B4U42_RS12380 () | 1019770..1019928 | + | 159 | WP_005714415.1 | hypothetical protein | - |
| B4U42_RS05490 () | 1019975..1020250 | + | 276 | WP_012621834.1 | hypothetical protein | - |
| B4U42_RS05495 () | 1020225..1020770 | + | 546 | WP_020996993.1 | lysozyme | - |
| B4U42_RS05500 () | 1020743..1021087 | + | 345 | WP_040978490.1 | DUF2570 family protein | - |
| B4U42_RS05505 () | 1021116..1021265 | + | 150 | WP_016527927.1 | hypothetical protein | - |
| B4U42_RS05510 () | 1021434..1021949 | + | 516 | WP_020996990.1 | terminase small subunit | - |
| B4U42_RS05515 () | 1021933..1023168 | + | 1236 | WP_035703164.1 | PBSX family phage terminase large subunit | - |
| B4U42_RS05520 () | 1023199..1024575 | + | 1377 | WP_106381479.1 | DUF4055 domain-containing protein | - |
| B4U42_RS05525 () | 1024532..1026277 | + | 1746 | WP_020996988.1 | minor capsid protein | - |
| B4U42_RS05530 () | 1026274..1026480 | + | 207 | WP_005714619.1 | hypothetical protein | - |
| B4U42_RS05535 () | 1026603..1027181 | + | 579 | WP_160415202.1 | hypothetical protein | - |
| B4U42_RS05540 () | 1027181..1027399 | + | 219 | WP_005714623.1 | hypothetical protein | - |
| B4U42_RS05545 () | 1027399..1027818 | + | 420 | WP_005714625.1 | Bifunctional (p)ppGpp synthase/hydrolase RelA | VF |
| B4U42_RS05550 () | 1027994..1028515 | + | 522 | WP_005714627.1 | phage antirepressor N-terminal domain-containing protein | - |
| B4U42_RS05555 () | 1028640..1029293 | + | 654 | Protein_1026 | hypothetical protein | - |
| B4U42_RS05560 () | 1029410..1030348 | + | 939 | WP_020996987.1 | Ig domain-containing protein | - |
| B4U42_RS05565 () | 1030434..1030775 | + | 342 | WP_005714837.1 | hypothetical protein | - |
| B4U42_RS05570 () | 1030750..1031211 | + | 462 | WP_112065009.1 | hypothetical protein | - |
| B4U42_RS05575 () | 1031214..1031564 | + | 351 | WP_005714843.1 | hypothetical protein | - |
| B4U42_RS05580 () | 1031561..1031764 | + | 204 | WP_020997023.1 | HK97 gp10 family phage protein | - |
| B4U42_RS05585 () | 1031808..1031999 | - | 192 | WP_005713940.1 | hypothetical protein | - |
| B4U42_RS05590 () | 1032143..1032574 | - | 432 | WP_005713942.1 | type II toxin-antitoxin system YafO family toxin | - |
| B4U42_RS05595 () | 1032567..1033085 | - | 519 | WP_005713944.1 | hypothetical protein | - |
| B4U42_RS05600 () | 1033193..1036074 | - | 2882 | Protein_1035 | phage tail protein | - |
| B4U42_RS05605 () | 1036141..1036488 | + | 348 | WP_005713952.1 | hypothetical protein | - |
| B4U42_RS05610 () | 1036498..1036959 | - | 462 | WP_005713954.1 | phage virion morphogenesis protein | - |
| B4U42_RS05615 () | 1037000..1037434 | - | 435 | WP_005713956.1 | phage tail protein | - |
| B4U42_RS05620 () | 1037431..1037649 | - | 219 | WP_005713957.1 | TraR/DksA family transcriptional regulator | - |
| B4U42_RS05625 () | 1037762..1038181 | - | 420 | WP_005713958.1 | type II toxin-antitoxin system YafO family toxin | - |
| B4U42_RS05630 () | 1038178..1038375 | - | 198 | WP_005713959.1 | hypothetical protein | - |
| B4U42_RS05635 () | 1038434..1038628 | - | 195 | WP_005713960.1 | hypothetical protein | - |
| B4U42_RS05640 () | 1038837..1039304 | - | 468 | WP_005713962.1 | hypothetical protein | - |
| B4U42_RS05645 () | 1039289..1039813 | - | 525 | WP_005713963.1 | lysozyme | - |
| B4U42_RS05650 () | 1039797..1039934 | - | 138 | WP_005713964.1 | hypothetical protein | - |
| B4U42_RS05655 () | 1039969..1040624 | - | 656 | Protein_1046 | terminase | - |
| B4U42_RS05660 () | 1040624..1040827 | - | 204 | WP_005713968.1 | hypothetical protein | - |
| B4U42_RS05665 () | 1040840..1041655 | - | 816 | WP_005713970.1 | GPO family capsid scaffolding protein | - |
| B4U42_RS05670 () | 1041823..1042119 | + | 297 | WP_005713972.1 | helix-turn-helix domain-containing protein | - |
| B4U42_RS05675 () | 1042340..1043084 | + | 745 | Protein_1050 | transposase | - |
| B4U42_RS05680 () | 1043273..1043458 | - | 186 | WP_005713975.1 | zf-HC2 domain-containing protein | - |
| B4U42_RS05685 () | 1043455..1044027 | - | 573 | WP_005713976.1 | sigma-70 family RNA polymerase sigma factor | - |
| B4U42_RS05690 () | 1044169..1044531 | + | 363 | WP_005713977.1 | hypothetical protein | - |
| B4U42_RS05695 () | 1044635..1045705 | + | 1071 | WP_035494346.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| B4U42_RS05700 () | 1045707..1046357 | + | 651 | WP_005713980.1 | cytochrome c biogenesis protein CcdA | - |
| B4U42_RS05705 () | 1046375..1046854 | + | 480 | WP_005713981.1 | redoxin family protein | - |
| B4U42_RS05710 () | 1047023..1047325 | - | 303 | Protein_1057 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|