MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 111030 bp
Accession: NZ_CP021432 Location: 1..111030 Organism: Yoonia vestfoldensis strain SMR4r Replicon: plasmid pSMR4r-1
Accession: NZ_CP021432 Location: 1..111030 Organism: Yoonia vestfoldensis strain SMR4r Replicon: plasmid pSMR4r-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOKVESSMR4R_RS19290 () | 3922..4221 | - | 300 | WP_009827038.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOKVESSMR4R_RS19295 () | 4214..4465 | - | 252 | WP_009827037.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| LOKVESSMR4R_RS19300 () | 4516..5160 | - | 645 | WP_009827036.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19305 () | 5266..5742 | - | 477 | WP_009827035.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19310 () | 5744..6127 | - | 384 | WP_009827034.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19315 () | 6206..6502 | - | 297 | WP_009827033.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19320 () | 6619..6999 | - | 381 | WP_087213650.1 | DUF3768 domain-containing protein | - |
| LOKVESSMR4R_RS19325 () | 7126..9297 | - | 2172 | WP_087213653.1 | ParB/RepB/Spo0J family partition protein | - |
| LOKVESSMR4R_RS19330 () | 9533..9991 | - | 459 | WP_007120589.1 | acyl-CoA thioesterase | - |
| LOKVESSMR4R_RS19335 () | 10065..10970 | - | 906 | WP_007120590.1 | Right origin-binding protein | VF |
| LOKVESSMR4R_RS19340 () | 10999..12201 | - | 1203 | WP_087213658.1 | CoA transferase | - |
| LOKVESSMR4R_RS19345 () | 12201..13355 | - | 1155 | WP_007120592.1 | Long-chain-alcohol dehydrogenase 1 | VF |
| LOKVESSMR4R_RS19350 () | 13374..14534 | - | 1161 | WP_007120593.1 | acyl-CoA dehydrogenase family protein | - |
| LOKVESSMR4R_RS19355 () | 14550..15344 | - | 795 | WP_087213661.1 | IclR family transcriptional regulator | - |
| LOKVESSMR4R_RS19360 () | 15540..16970 | + | 1431 | WP_204248801.1 | aldehyde dehydrogenase family protein | - |
| LOKVESSMR4R_RS19365 () | 16973..19018 | + | 2046 | WP_067261948.1 | enoyl-CoA hydratase/isomerase family protein | - |
| LOKVESSMR4R_RS19370 () | 18991..19858 | - | 868 | Protein_17 | IS5 family transposase ISPko1 | Transposase |
| LOKVESSMR4R_RS19375 () | 20115..21017 | + | 903 | WP_087213774.1 | Monoterpene epsilon-lactone hydrolase | VF |
| LOKVESSMR4R_RS19380 () | 21133..22770 | + | 1638 | WP_067261950.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LOKVESSMR4R_RS19385 () | 22843..23598 | + | 756 | WP_087213662.1 | Cyclopentanol dehydrogenase | VF |
| LOKVESSMR4R_RS19390 () | 23675..24433 | + | 759 | WP_087213665.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| LOKVESSMR4R_RS19395 () | 24433..25353 | + | 921 | WP_087213668.1 | FAD-binding protein | - |
| LOKVESSMR4R_RS19400 () | 25356..26555 | + | 1200 | WP_087213671.1 | 3-oxoadipyl-CoA thiolase | - |
| LOKVESSMR4R_RS19405 () | 26781..27275 | + | 495 | WP_087213673.1 | helix-turn-helix domain-containing protein | - |
| LOKVESSMR4R_RS19410 () | 27277..27831 | - | 555 | WP_087213677.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19415 () | 27954..28337 | + | 384 | WP_087213680.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19420 () | 28452..31403 | - | 2952 | WP_087212231.1 | Tn3 family transposase TnpA_ISAli20 | Transposase |
| LOKVESSMR4R_RS19425 () | 31544..32110 | + | 567 | WP_087212234.1 | Tn3 family transposase TnpR_ISAli20 | Transposase |
| LOKVESSMR4R_RS19430 () | 32114..32698 | + | 585 | WP_087213685.1 | lytic transglycosylase domain-containing protein | - |
| LOKVESSMR4R_RS19435 () | 32714..32998 | + | 285 | WP_087213687.1 | TrbC/VirB2 family protein | - |
| LOKVESSMR4R_RS19440 () | 33111..33389 | + | 279 | WP_087213690.1 | VirB3 family type IV secretion system protein | - |
| LOKVESSMR4R_RS19445 () | 33379..35754 | + | 2376 | WP_087213694.1 | Type IV secretion system protein virB4 | VF |
| LOKVESSMR4R_RS19455 () | 36135..37175 | + | 1041 | WP_087213186.1 | IS110 family transposase ISRhru3 | Transposase |
| LOKVESSMR4R_RS19460 () | 37581..38639 | + | 1059 | WP_087213701.1 | lytic transglycosylase domain-containing protein | - |
| LOKVESSMR4R_RS19465 () | 38636..39403 | + | 768 | WP_087213703.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19470 () | 39484..39783 | + | 300 | WP_087213775.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19475 () | 39783..40796 | + | 1014 | WP_087213705.1 | type IV secretion system protein | - |
| LOKVESSMR4R_RS19480 () | 40832..41488 | + | 657 | WP_087213707.1 | Type IV secretion system protein PtlE | VF |
| LOKVESSMR4R_RS19485 () | 41502..42215 | + | 714 | WP_087213776.1 | Type IV secretion system protein virB9 | VF |
| LOKVESSMR4R_RS19490 () | 42218..43657 | + | 1440 | WP_087213709.1 | Type IV secretion system protein PtlG | VF |
| LOKVESSMR4R_RS19495 () | 43659..44633 | + | 975 | WP_087213711.1 | Type IV secretion system protein VirB11 | VF |
| LOKVESSMR4R_RS19500 () | 44877..45581 | + | 705 | WP_087213713.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19505 () | 46091..48031 | - | 1941 | WP_087213715.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LOKVESSMR4R_RS19510 () | 48047..50008 | - | 1962 | WP_087213717.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOKVESSMR4R_RS19515 () | 50001..50558 | - | 558 | WP_087213719.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19520 () | 51163..51369 | - | 207 | WP_087213721.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19530 () | 51730..52455 | - | 726 | WP_162290758.1 | SH3 domain-containing protein | - |
| LOKVESSMR4R_RS19535 () | 53041..53970 | - | 930 | WP_087213727.1 | DUF2493 domain-containing protein | - |
| LOKVESSMR4R_RS19540 () | 54696..57992 | - | 3297 | WP_157898305.1 | DEAD/DEAH box helicase family protein | - |
| LOKVESSMR4R_RS19545 () | 58287..59672 | + | 1386 | WP_087208069.1 | IS1182 family transposase ISRssp12 | Transposase |
| LOKVESSMR4R_RS20535 () | 59984..60124 | - | 141 | WP_204248800.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19555 () | 60617..61345 | - | 729 | WP_087213733.1 | DUF736 family protein | - |
| LOKVESSMR4R_RS19560 () | 61565..61756 | - | 192 | Protein_53 | hypothetical protein | - |
| LOKVESSMR4R_RS19565 () | 61863..63644 | - | 1782 | Protein_54 | strawberry notch C-terminal domain-containing protein | - |
| LOKVESSMR4R_RS19570 () | 63768..65294 | + | 1527 | WP_087205766.1 | tyrosine-type recombinase/integrase | - |
| LOKVESSMR4R_RS19575 () | 65291..66202 | + | 912 | WP_087205768.1 | Tn3 family transposase TnBth2 | Transposase |
| LOKVESSMR4R_RS19580 () | 66199..67203 | + | 1005 | WP_087205770.1 | Tyrosine recombinase XerD | VF |
| LOKVESSMR4R_RS19585 () | 67244..69685 | - | 2442 | WP_087212283.1 | DEAD/DEAH box helicase | - |
| LOKVESSMR4R_RS19590 () | 69928..72450 | - | 2523 | WP_087213737.1 | strawberry notch family protein | - |
| LOKVESSMR4R_RS19600 () | 73887..74162 | - | 276 | WP_087213739.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOKVESSMR4R_RS19605 () | 74155..74448 | - | 294 | WP_087213742.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOKVESSMR4R_RS19610 () | 74517..75172 | - | 656 | Protein_63 | hypothetical protein | - |
| LOKVESSMR4R_RS19615 () | 75274..75867 | - | 594 | WP_087213777.1 | regulator | - |
| LOKVESSMR4R_RS19620 () | 75975..77957 | - | 1983 | WP_087213744.1 | ParB/RepB/Spo0J family partition protein | - |
| LOKVESSMR4R_RS19625 () | 78117..78506 | - | 390 | WP_087213746.1 | DUF3768 domain-containing protein | - |
| LOKVESSMR4R_RS19630 () | 78605..79519 | - | 915 | WP_087213748.1 | DUF1738 domain-containing protein | - |
| LOKVESSMR4R_RS20355 () | 80156..80272 | + | 117 | WP_123619008.1 | site-specific integrase | - |
| LOKVESSMR4R_RS19635 () | 80312..81082 | + | 771 | WP_087213750.1 | IS91 family transposase ISShvi3 | Transposase |
| LOKVESSMR4R_RS20360 () | 81192..81575 | + | 384 | WP_157898306.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19650 () | 81835..82206 | + | 372 | WP_087213754.1 | XRE family transcriptional regulator | - |
| LOKVESSMR4R_RS19655 () | 82190..82765 | + | 576 | WP_087213756.1 | ImmA/IrrE family metallo-endopeptidase | - |
| LOKVESSMR4R_RS20365 () | 82853..83518 | + | 666 | WP_157898307.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19665 () | 83586..86978 | - | 3393 | WP_157898308.1 | AAA family ATPase | - |
| LOKVESSMR4R_RS19670 () | 86990..88171 | - | 1182 | WP_087213764.1 | DNA repair exonuclease | - |
| LOKVESSMR4R_RS19675 () | 88344..90005 | - | 1662 | WP_087213766.1 | ATP-binding protein | - |
| LOKVESSMR4R_RS19680 () | 90016..91230 | - | 1215 | WP_087213767.1 | hypothetical protein | - |
| LOKVESSMR4R_RS19685 () | 91217..93397 | - | 2181 | WP_087213768.1 | DEAD/DEAH box helicase | - |
| LOKVESSMR4R_RS19690 () | 93407..94714 | - | 1308 | WP_087213769.1 | ATP-binding protein | - |
| LOKVESSMR4R_RS19695 () | 94707..95270 | - | 564 | Protein_80 | hypothetical protein | - |
| LOKVESSMR4R_RS19700 () | 95323..96557 | + | 1235 | WP_087205762.1 | IS3 family transposase ISMex33 | Transposase |
| LOKVESSMR4R_RS19705 () | 96597..98567 | - | 1971 | Protein_82 | TerB N-terminal domain-containing protein | - |
| LOKVESSMR4R_RS19710 () | 98844..99941 | - | 1098 | WP_087213771.1 | Fic family protein | - |
| LOKVESSMR4R_RS19715 () | 100064..100654 | - | 591 | WP_087213772.1 | SMC-Scp complex subunit ScpB | - |
| LOKVESSMR4R_RS19720 () | 100657..101547 | - | 891 | WP_087213773.1 | DUF1403 family protein | - |
| LOKVESSMR4R_RS19725 () | 101704..102801 | + | 1098 | WP_084353840.1 | tyrosine-type recombinase/integrase | - |
| LOKVESSMR4R_RS19730 () | 102899..104257 | - | 1359 | Protein_87 | ParB N-terminal domain-containing protein | - |
| LOKVESSMR4R_RS19735 () | 104437..105648 | - | 1212 | WP_037954835.1 | replication initiation protein RepC | - |
| LOKVESSMR4R_RS19740 () | 105862..106791 | - | 930 | WP_037954833.1 | plasmid partitioning protein RepB | - |
| LOKVESSMR4R_RS19745 () | 106775..107968 | - | 1194 | WP_009827042.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOKVESSMR4R_RS19750 () | 108161..109072 | - | 912 | WP_009827041.1 | DUF2493 domain-containing protein | - |
| LOKVESSMR4R_RS19755 () | 109385..110431 | - | 1047 | WP_009827040.1 | toprim domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|