MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 166833 bp
Accession: NZ_CP021329 Location: 4172114..4338946 Organism: Raoultella ornithinolytica strain Ro24724 Replicon: chromosome
Accession: NZ_CP021329 Location: 4172114..4338946 Organism: Raoultella ornithinolytica strain Ro24724 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA210_RS22685 () | 4167632..4168516 | + | 885 | WP_015584316.1 | LysR family transcriptional regulator | - |
| CA210_RS22690 () | 4168513..4169748 | - | 1236 | WP_088883963.1 | MFS transporter | - |
| CA210_RS22695 () | 4169891..4170346 | + | 456 | WP_004862084.1 | helix-turn-helix transcriptional regulator | - |
| CA210_RS22700 () | 4170426..4170817 | + | 392 | Protein_3805 | hypothetical protein | - |
| CA210_RS22705 () | 4170880..4171770 | - | 891 | WP_044351621.1 | DMT family transporter | - |
| CA210_RS22710 () | 4171874..4173208 | + | 1335 | WP_075808544.1 | PLP-dependent aminotransferase family protein | - |
| CA210_RS22715 () | 4173484..4173918 | + | 435 | WP_015584322.1 | GNAT family N-acetyltransferase | - |
| CA210_RS22720 () | 4174062..4174412 | + | 351 | WP_032724357.1 | hypothetical protein | - |
| CA210_RS22725 () | 4174765..4175265 | + | 501 | WP_004862067.1 | DUF1003 domain-containing protein | - |
| CA210_RS22730 () | 4175289..4177163 | + | 1875 | WP_088883964.1 | KUP/HAK/KT family potassium transporter | - |
| CA210_RS22735 () | 4177379..4177876 | + | 498 | WP_048023692.1 | hypothetical protein | - |
| CA210_RS22740 () | 4178034..4179959 | - | 1926 | WP_088884162.1 | C1 family peptidase | - |
| CA210_RS22745 () | 4180590..4180868 | + | 279 | WP_015584326.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CA210_RS22750 () | 4180859..4181341 | + | 483 | WP_044351088.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CA210_RS29165 () | 4181526..4181876 | + | 351 | WP_044351090.1 | hypothetical protein | - |
| CA210_RS22760 () | 4182047..4182754 | - | 708 | WP_088883965.1 | hypothetical protein | VF |
| CA210_RS22765 () | 4182911..4184257 | - | 1347 | WP_088884163.1 | ISNCY family transposase ISLad2 | Transposase |
| CA210_RS29170 () | 4184462..4184620 | - | 159 | WP_157721034.1 | hypothetical protein | - |
| CA210_RS22775 () | 4185346..4186221 | - | 876 | WP_088883966.1 | NAD(P)-dependent oxidoreductase | - |
| CA210_RS22780 () | 4186483..4187199 | - | 717 | WP_004861956.1 | ABC transporter ATP-binding protein | - |
| CA210_RS22785 () | 4187196..4188071 | - | 876 | WP_015584331.1 | ATP-binding cassette domain-containing protein | - |
| CA210_RS22790 () | 4188068..4189354 | - | 1287 | WP_015584332.1 | high-affinity branched-chain amino acid ABC transporter permease LivM | - |
| CA210_RS22795 () | 4189365..4190279 | - | 915 | WP_088883967.1 | branched-chain amino acid ABC transporter permease LivH | - |
| CA210_RS22800 () | 4190379..4191437 | - | 1059 | WP_162180097.1 | branched-chain amino acid ABC transporter substrate-binding protein | - |
| CA210_RS22805 () | 4192152..4193558 | + | 1407 | WP_088884164.1 | glycoside hydrolase family 10 protein | - |
| CA210_RS22810 () | 4193491..4194822 | - | 1332 | WP_088883968.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| CA210_RS22815 () | 4194822..4195094 | - | 273 | WP_032717448.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| CA210_RS22820 () | 4195298..4195852 | - | 555 | WP_004861926.1 | RNA polymerase sigma factor | - |
| CA210_RS22825 () | 4195858..4196283 | - | 426 | WP_032724724.1 | hypothetical protein | - |
| CA210_RS22830 () | 4196416..4197369 | - | 954 | WP_004861921.1 | hypothetical protein | - |
| CA210_RS22835 () | 4197583..4198215 | - | 633 | WP_048023555.1 | class I SAM-dependent methyltransferase | - |
| CA210_RS22840 () | 4198235..4199476 | - | 1242 | WP_088883969.1 | sensor domain-containing diguanylate cyclase | - |
| CA210_RS22845 () | 4199705..4200811 | - | 1107 | WP_004861907.1 | DUF4056 domain-containing protein | - |
| CA210_RS22850 () | 4200865..4201824 | - | 960 | WP_015584341.1 | hypothetical protein | - |
| CA210_RS22855 () | 4201842..4202969 | - | 1128 | WP_004861901.1 | BamA/TamA family outer membrane protein | - |
| CA210_RS22860 () | 4203430..4204122 | + | 693 | WP_004861896.1 | TenA family protein | - |
| CA210_RS22865 () | 4204119..4204847 | + | 729 | WP_088883970.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CA210_RS22870 () | 4204844..4205584 | + | 741 | WP_088883971.1 | ABC transporter permease | - |
| CA210_RS22875 () | 4205594..4206529 | + | 936 | WP_004861888.1 | ABC transporter substrate-binding protein | - |
| CA210_RS22880 () | 4206836..4208221 | + | 1386 | WP_015584344.1 | Acetylornithine/succinyldiaminopimelate aminotransferase | VF |
| CA210_RS22885 () | 4208231..4209712 | + | 1482 | WP_160873090.1 | aspartate aminotransferase family protein | - |
| CA210_RS22890 () | 4209937..4211127 | - | 1191 | WP_088883972.1 | redoxin domain-containing protein | - |
| CA210_RS22895 () | 4211212..4212573 | - | 1362 | WP_032717441.1 | HAMP domain-containing protein | - |
| CA210_RS22900 () | 4212570..4213310 | - | 741 | WP_004861874.1 | Regulator of RpoS | VF |
| CA210_RS22905 () | 4213395..4214387 | - | 993 | WP_054828887.1 | alpha/beta hydrolase | - |
| CA210_RS22910 () | 4214574..4215314 | - | 741 | WP_015584350.1 | glutamine amidotransferase | - |
| CA210_RS22915 () | 4215473..4216459 | - | 987 | WP_004861863.1 | hypothetical protein | - |
| CA210_RS22920 () | 4216475..4217326 | - | 852 | WP_004861860.1 | hypothetical protein | - |
| CA210_RS22925 () | 4217495..4218892 | + | 1398 | WP_004861858.1 | FAD-binding oxidoreductase | - |
| CA210_RS22930 () | 4218917..4220260 | + | 1344 | WP_088883973.1 | carbohydrate kinase | - |
| CA210_RS22935 () | 4220257..4221222 | + | 966 | WP_015584352.1 | tagatose-6-phosphate kinase | - |
| CA210_RS22940 () | 4221237..4222619 | + | 1383 | WP_052626740.1 | sugar porter family MFS transporter | - |
| CA210_RS22945 () | 4222699..4223205 | + | 507 | WP_004861848.1 | D-ribose pyranase | - |
| CA210_RS22950 () | 4223207..4224586 | + | 1380 | WP_004861845.1 | sugar porter family MFS transporter | - |
| CA210_RS22955 () | 4224733..4226655 | - | 1923 | WP_004861842.1 | penicillin-binding protein 2 | - |
| CA210_RS22960 () | 4226878..4228677 | - | 1800 | WP_086816633.1 | Glutamyl-tRNA(Gln) amidotransferase subunit A | VF |
| CA210_RS22965 () | 4228674..4232279 | - | 3606 | WP_004861838.1 | urea carboxylase | - |
| CA210_RS22970 () | 4232448..4233083 | - | 636 | WP_088883974.1 | urea carboxylase-associated family protein | - |
| CA210_RS22975 () | 4233094..4233822 | - | 729 | WP_004861830.1 | urea carboxylase-associated family protein | - |
| CA210_RS22980 () | 4233827..4234606 | - | 780 | WP_088883975.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CA210_RS22985 () | 4234603..4235418 | - | 816 | WP_004861825.1 | ABC transporter permease subunit | - |
| CA210_RS22990 () | 4235443..4236501 | - | 1059 | WP_088883976.1 | putative urea ABC transporter substrate-binding protein | - |
| CA210_RS22995 () | 4237223..4239400 | + | 2178 | WP_088883977.1 | Catalase-peroxidase | VF |
| CA210_RS23000 () | 4239452..4240465 | - | 1014 | WP_172418248.1 | cell division protein ZapE | - |
| CA210_RS23005 () | 4240851..4242974 | + | 2124 | WP_015584361.1 | TonB-dependent siderophore receptor | - |
| CA210_RS23010 () | 4242983..4244005 | + | 1023 | WP_088883979.1 | ABC transporter substrate-binding protein | - |
| CA210_RS23015 () | 4244225..4245634 | + | 1410 | WP_004861807.1 | MFS transporter | - |
| CA210_RS23020 () | 4245770..4246651 | - | 882 | WP_004861802.1 | LysR family transcriptional regulator | - |
| CA210_RS23025 () | 4246837..4247619 | + | 783 | WP_088883980.1 | HTH-type transcriptional activator RhaS | VF |
| CA210_RS23030 () | 4247703..4248323 | + | 621 | WP_032717430.1 | LysE family translocator | - |
| CA210_RS23035 () | 4248370..4250670 | - | 2301 | WP_004861793.1 | FdhF/YdeP family oxidoreductase | - |
| CA210_RS23040 () | 4250885..4251802 | - | 918 | WP_004861790.1 | hypothetical protein | - |
| CA210_RS23045 () | 4252218..4253087 | - | 870 | WP_004861787.1 | DUF2236 domain-containing protein | - |
| CA210_RS23050 () | 4253212..4253643 | - | 432 | WP_004861784.1 | OsmC family protein | - |
| CA210_RS23055 () | 4253934..4254818 | - | 885 | WP_004861781.1 | LysR family transcriptional regulator | - |
| CA210_RS23060 () | 4254932..4255783 | + | 852 | WP_004861778.1 | MBL fold metallo-hydrolase | - |
| CA210_RS23065 () | 4255941..4256081 | + | 141 | WP_004861775.1 | stationary-phase-induced ribosome-associated protein | - |
| CA210_RS23070 () | 4256254..4257951 | + | 1698 | WP_004861771.1 | NAD-dependent malic enzyme | - |
| CA210_RS23075 () | 4258291..4260003 | + | 1713 | WP_064359361.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CA210_RS23080 () | 4260069..4261046 | - | 978 | WP_088883981.1 | bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase | - |
| CA210_RS23085 () | 4261248..4261847 | - | 600 | WP_004861761.1 | inorganic diphosphatase | - |
| CA210_RS23090 () | 4262103..4263113 | + | 1011 | WP_004861757.1 | alcohol dehydrogenase AdhP | - |
| CA210_RS23095 () | 4263319..4264941 | + | 1623 | WP_004861755.1 | TIGR04028 family ABC transporter substrate-binding protein | - |
| CA210_RS23100 () | 4264952..4265896 | + | 945 | WP_004861753.1 | ABC transporter permease | - |
| CA210_RS23105 () | 4265893..4266744 | + | 852 | WP_004861751.1 | ABC transporter permease | - |
| CA210_RS23110 () | 4266741..4268345 | + | 1605 | WP_004861748.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CA210_RS23115 () | 4268342..4269331 | + | 990 | WP_015584382.1 | putative FMN-dependent luciferase-like monooxygenase | - |
| CA210_RS23120 () | 4269340..4270434 | + | 1095 | WP_088883982.1 | alkylhydroperoxidase domain protein | - |
| CA210_RS23125 () | 4270431..4271600 | - | 1170 | WP_004861738.1 | MFS transporter AraJ | - |
| CA210_RS23130 () | 4271818..4272150 | - | 333 | WP_004861735.1 | hypothetical protein | - |
| CA210_RS23135 () | 4272451..4273269 | + | 819 | WP_004861730.1 | polyphosphate kinase 2 | - |
| CA210_RS23140 () | 4273428..4273859 | + | 432 | WP_044348267.1 | VOC family protein | - |
| CA210_RS23145 () | 4273896..4274564 | - | 669 | WP_004861726.1 | formate dehydrogenase-N subunit gamma | - |
| CA210_RS23150 () | 4274557..4275441 | - | 885 | WP_015584385.1 | formate dehydrogenase subunit beta | - |
| CA210_RS23155 () | 4275453..4278500 | - | 3048 | WP_088883983.1 | formate dehydrogenase-N subunit alpha | - |
| CA210_RS23165 () | 4278724..4279602 | + | 879 | WP_004861717.1 | aromatic amino acid DMT transporter YddG | - |
| CA210_RS23170 () | 4279599..4280372 | - | 774 | WP_088883984.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| CA210_RS23175 () | 4280382..4281395 | - | 1014 | WP_086816660.1 | ring-hydroxylating dioxygenase ferredoxin reductase family protein | - |
| CA210_RS23180 () | 4281405..4281890 | - | 486 | WP_004861712.1 | benzoate 1,2-dioxygenase small subunit | - |
| CA210_RS23185 () | 4281890..4283272 | - | 1383 | WP_088883985.1 | Rieske 2Fe-2S domain-containing protein | - |
| CA210_RS23190 () | 4283417..4284343 | - | 927 | WP_088883986.1 | catechol 1,2-dioxygenase | - |
| CA210_RS23195 () | 4284421..4284711 | - | 291 | WP_004861704.1 | muconolactone Delta-isomerase | - |
| CA210_RS23200 () | 4284731..4285849 | - | 1119 | WP_004861702.1 | muconate cycloisomerase family protein | - |
| CA210_RS23205 () | 4286109..4286906 | + | 798 | WP_015584389.1 | helix-turn-helix domain-containing protein | - |
| CA210_RS23210 () | 4286909..4288399 | - | 1491 | WP_004861697.1 | MFS transporter | - |
| CA210_RS23215 () | 4288518..4289108 | + | 591 | WP_032717407.1 | TetR family transcriptional regulator | - |
| CA210_RS23220 () | 4289385..4290773 | + | 1389 | WP_004861692.1 | NarK family nitrate/nitrite MFS transporter | - |
| CA210_RS23225 () | 4290911..4294651 | + | 3741 | WP_088883987.1 | nitrate reductase subunit alpha | - |
| CA210_RS23230 () | 4294648..4296174 | + | 1527 | WP_015584391.1 | nitrate reductase subunit beta | - |
| CA210_RS23235 () | 4296174..4296869 | + | 696 | WP_004861686.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| CA210_RS23240 () | 4296866..4297546 | + | 681 | WP_004861681.1 | respiratory nitrate reductase subunit gamma | - |
| CA210_RS23245 () | 4297739..4298011 | + | 273 | WP_032717404.1 | hypothetical protein | - |
| CA210_RS23250 () | 4298057..4298968 | - | 912 | WP_099144451.1 | HTH-type transcriptional regulator HdfR | VF |
| CA210_RS23255 () | 4299071..4299385 | + | 315 | WP_004861674.1 | carboxymuconolactone decarboxylase family protein | - |
| CA210_RS23260 () | 4299396..4299806 | + | 411 | WP_015584395.1 | tautomerase family protein | - |
| CA210_RS23265 () | 4300261..4301106 | - | 846 | WP_004861668.1 | N-hydroxyarylamine O-acetyltransferase | - |
| CA210_RS23270 () | 4301183..4302838 | - | 1656 | WP_004861666.1 | iron ABC transporter permease | - |
| CA210_RS23275 () | 4302908..4303876 | - | 969 | WP_088883988.1 | ABC transporter substrate-binding protein | - |
| CA210_RS23280 () | 4303873..4304577 | - | 705 | WP_162098180.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CA210_RS23285 () | 4304789..4305370 | + | 582 | WP_004861659.1 | flavin reductase family protein | - |
| CA210_RS23290 () | 4306145..4306654 | + | 510 | WP_088883989.1 | MarR family transcriptional regulator | - |
| CA210_RS23295 () | 4306644..4307420 | + | 777 | WP_004861654.1 | DNA alkylation repair protein | - |
| CA210_RS23300 () | 4307543..4308061 | + | 519 | WP_004861652.1 | hypothetical protein | VF |
| CA210_RS23305 () | 4308070..4308891 | - | 822 | WP_004861650.1 | helix-turn-helix domain-containing protein | - |
| CA210_RS23310 () | 4309097..4310668 | + | 1572 | WP_032724715.1 | family 78 glycoside hydrolase catalytic domain | - |
| CA210_RS23315 () | 4310694..4312076 | + | 1383 | WP_088883990.1 | MFS transporter | - |
| CA210_RS23320 () | 4312121..4313725 | + | 1605 | WP_032717399.1 | carbohydrate porin | - |
| CA210_RS23325 () | 4313934..4314161 | - | 228 | WP_004861642.1 | tautomerase PptA | - |
| CA210_RS23330 () | 4314229..4314846 | - | 618 | WP_088402665.1 | glutathione S-transferase | - |
| CA210_RS23335 () | 4315062..4315718 | - | 657 | WP_048023505.1 | hypothetical protein | - |
| CA210_RS23345 () | 4316043..4316936 | - | 894 | WP_172418241.1 | transporter substrate-binding domain-containing protein | - |
| CA210_RS23350 () | 4316933..4317709 | - | 777 | WP_004861634.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CA210_RS23355 () | 4317693..4318622 | - | 930 | WP_004861632.1 | amino acid ABC transporter permease | - |
| CA210_RS23360 () | 4318632..4319141 | - | 510 | WP_004861630.1 | GNAT family N-acetyltransferase | - |
| CA210_RS29350 () | 4319153..4321420 | - | 2268 | Protein_3936 | NtaA/DmoA family FMN-dependent monooxygenase | - |
| CA210_RS23375 () | 4321473..4322594 | - | 1122 | WP_065906479.1 | M20 peptidase aminoacylase family protein | - |
| CA210_RS23380 () | 4322591..4323592 | - | 1002 | WP_015584404.1 | MsnO8 family LLM class oxidoreductase | - |
| CA210_RS23385 () | 4323698..4324243 | - | 546 | WP_004861618.1 | AAA family ATPase | - |
| CA210_RS23390 () | 4324327..4324725 | - | 399 | WP_004861615.1 | cupin domain-containing protein | - |
| CA210_RS23395 () | 4324839..4325726 | + | 888 | WP_004861613.1 | HTH-type transcriptional regulator ArgP | VF |
| CA210_RS23400 () | 4325916..4327379 | + | 1464 | WP_004861610.1 | L-asparagine permease | - |
| CA210_RS23405 () | 4327425..4327646 | - | 222 | WP_004861607.1 | YgdI/YgdR family lipoprotein | - |
| CA210_RS23410 () | 4327791..4328852 | - | 1062 | WP_015584406.1 | YncE family protein | - |
| CA210_RS23415 () | 4329113..4331224 | + | 2112 | WP_015584407.1 | Vitamin B12 transporter BtuB | VF |
| CA210_RS23420 () | 4331885..4332820 | + | 936 | WP_088883991.1 | pyrimidine-specific ribonucleoside hydrolase RihA | - |
| CA210_RS23425 () | 4333090..4333395 | - | 306 | WP_071359385.1 | DUF596 domain-containing protein | - |
| CA210_RS29175 () | 4333475..4334242 | - | 768 | WP_094969639.1 | hypothetical protein | - |
| CA210_RS23440 () | 4334457..4335494 | - | 1038 | WP_004861590.1 | NADP-dependent oxidoreductase | - |
| CA210_RS23445 () | 4335560..4336135 | - | 576 | WP_015584412.1 | XRE family transcriptional regulator | - |
| CA210_RS23450 () | 4336346..4336864 | + | 519 | WP_032687873.1 | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | - |
| CA210_RS23455 () | 4336861..4337310 | + | 450 | WP_088883992.1 | DMT family transporter | - |
| CA210_RS23460 () | 4337320..4337553 | - | 234 | WP_004861582.1 | YdcY family protein | - |
| CA210_RS23465 () | 4337570..4339168 | - | 1599 | WP_048024284.1 | ABC transporter substrate-binding protein | - |
| CA210_RS23470 () | 4339431..4340864 | + | 1434 | WP_088883993.1 | aldehyde dehydrogenase | - |
| CA210_RS23475 () | 4341127..4341897 | - | 771 | WP_004861572.1 | alpha/beta hydrolase | - |
| CA210_RS23480 () | 4341969..4342142 | - | 174 | WP_004861568.1 | GhoT/OrtT family toxin | - |
| CA210_RS23485 () | 4342333..4342425 | + | 93 | WP_004861562.1 | stress response membrane protein YncL | - |
| CA210_RS23490 () | 4342478..4342765 | - | 288 | WP_015584417.1 | hypothetical protein | - |
| CA210_RS23495 () | 4343368..4343490 | + | 123 | WP_086816685.1 | small membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|